RNA–Protein interactions for RNA: ENST00000569108.5

SPIRE2-210, Transcript of spire type actin nucleation factor 2, humanhuman

TSL 1 (best)

Gene SPIRE2, Length 2,409 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE2-210ENST00000569108 NISCHQ9Y2I1 1504 aa40.36■■■■■ 4.05
SPIRE2-210ENST00000569108 CCDC180Q9P1Z9 1646 aa35.01■■■■□ 3.19
SPIRE2-210ENST00000569108 ZCCHC6Q5VYS8 1495 aaKnown RBP33.9■■■■□ 3.02
SPIRE2-210ENST00000569108 DCAF8L2P0C7V8 631 aa33.46■■■□□ 2.95
SPIRE2-210ENST00000569108 DCAF1Q9Y4B6 1507 aa33.31■■■□□ 2.92
SPIRE2-210ENST00000569108 ABCC9O60706 1549 aa33.18■■■□□ 2.9
SPIRE2-210ENST00000569108 SHROOM4Q9ULL8 1493 aa33.13■■■□□ 2.89
SPIRE2-210ENST00000569108 MYO15BQ96JP2 1530 aa32.86■■■□□ 2.85
SPIRE2-210ENST00000569108 NACADO15069 1562 aa32.65■■■□□ 2.82
SPIRE2-210ENST00000569108 RB1CC1Q8TDY2 1594 aa32.33■■■□□ 2.77
SPIRE2-210ENST00000569108 SCRIBQ14160 1630 aa32.33■■■□□ 2.77
SPIRE2-210ENST00000569108 SUPT5HO00267 1087 aaKnown RBP31.96■■■□□ 2.71
SPIRE2-210ENST00000569108 UNC13AQ9UPW8 1703 aa31.68■■■□□ 2.66
SPIRE2-210ENST00000569108 CECR2Q9BXF3 1484 aa31.42■■■□□ 2.62
SPIRE2-210ENST00000569108 BICRAQ9NZM4 1560 aa31.42■■■□□ 2.62
SPIRE2-210ENST00000569108 RSF1Q96T23 1441 aaPredicted RBP31.41■■■□□ 2.62
SPIRE2-210ENST00000569108 PABPN1Q86U42 306 aaKnown RBP eCLIP31.4■■■□□ 2.621e-6■■□□□ 12
SPIRE2-210ENST00000569108 MROH2BQ7Z745 1585 aa31.22■■■□□ 2.59
SPIRE2-210ENST00000569108 BAZ1AQ9NRL2 1556 aaPredicted RBP31.11■■■□□ 2.57
SPIRE2-210ENST00000569108 SMARCA4P51532 1647 aa30.96■■■□□ 2.55
SPIRE2-210ENST00000569108 WIZO95785 1651 aa30.94■■■□□ 2.54
SPIRE2-210ENST00000569108 CHIC1Q5VXU3 224 aa30.63■■■□□ 2.49
SPIRE2-210ENST00000569108 TOP2AP11388 1531 aaKnown RBP30.58■■■□□ 2.49
SPIRE2-210ENST00000569108 PEG3Q9GZU2 1588 aa30.57■■■□□ 2.48
SPIRE2-210ENST00000569108 ATAD2BQ9ULI0 1458 aa30.49■■■□□ 2.47
SPIRE2-210ENST00000569108 EIF4G1Q04637 1599 aaKnown RBP30.45■■■□□ 2.46
SPIRE2-210ENST00000569108 SMARCA2P51531 1590 aa30.4■■■□□ 2.46
SPIRE2-210ENST00000569108 CCDC88BA6NC98 1476 aa30.35■■■□□ 2.45
SPIRE2-210ENST00000569108 BAZ1BQ9UIG0 1483 aaKnown RBP30.29■■■□□ 2.44
SPIRE2-210ENST00000569108 NCAPD3P42695 1498 aa30.19■■■□□ 2.42
SPIRE2-210ENST00000569108 HMGXB3Q12766 1538 aa30.09■■■□□ 2.41
SPIRE2-210ENST00000569108 TRIM41Q8WV44 630 aa30■■■□□ 2.39
SPIRE2-210ENST00000569108 CC2D2AQ9P2K1 1620 aa29.97■■■□□ 2.39
SPIRE2-210ENST00000569108 PELP1Q8IZL8 1130 aaKnown RBP29.93■■■□□ 2.38
SPIRE2-210ENST00000569108 ABCC8Q09428 1581 aa29.75■■■□□ 2.35
SPIRE2-210ENST00000569108 HRCP23327 699 aa29.56■■■□□ 2.32
SPIRE2-210ENST00000569108 CFTRP13569 1480 aa29.56■■■□□ 2.32
SPIRE2-210ENST00000569108 WRNQ14191 1432 aaPredicted RBP eCLIP29.53■■■□□ 2.32
SPIRE2-210ENST00000569108 LOC105371045A0A1W2PR82 267 aa29.53■■■□□ 2.32
SPIRE2-210ENST00000569108 FAM9AQ8IZU1 332 aaPredicted RBP29.51■■■□□ 2.31
SPIRE2-210ENST00000569108 CADPSQ9ULU8 1353 aa29.46■■■□□ 2.31
SPIRE2-210ENST00000569108 DNAJC5BQ9UF47 199 aa29.39■■■□□ 2.3
SPIRE2-210ENST00000569108 SYNJ1O43426 1573 aa29.39■■■□□ 2.29
SPIRE2-210ENST00000569108 SOGA1O94964 1423 aa29.26■■■□□ 2.27
SPIRE2-210ENST00000569108 PRDM2Q13029 1718 aa29.26■■■□□ 2.27
SPIRE2-210ENST00000569108 TOP2BQ02880 1626 aa29.22■■■□□ 2.27
SPIRE2-210ENST00000569108 NESP48681 1621 aa29.18■■■□□ 2.26
SPIRE2-210ENST00000569108 CUX1P39880 1505 aa29.17■■■□□ 2.26
SPIRE2-210ENST00000569108 BIVM-ERCC5R4GMW8 1640 aa29.16■■■□□ 2.26
SPIRE2-210ENST00000569108 RUSC2Q8N2Y8 1516 aa29.15■■■□□ 2.26
SPIRE2-210ENST00000569108 EHMT2Q96KQ7 1210 aa29.12■■■□□ 2.25
SPIRE2-210ENST00000569108 EEA1Q15075 1411 aa29.11■■■□□ 2.25
SPIRE2-210ENST00000569108 FANCD2Q9BXW9 1451 aa29.11■■■□□ 2.25
SPIRE2-210ENST00000569108 LAMC3Q9Y6N6 1575 aa29.08■■■□□ 2.25
SPIRE2-210ENST00000569108 CSRNP3Q8WYN3 585 aa29.06■■■□□ 2.24
SPIRE2-210ENST00000569108 MYT1Q01538 1121 aa29.05■■■□□ 2.24
SPIRE2-210ENST00000569108 PDS5BQ9NTI5 1447 aa28.91■■■□□ 2.22
SPIRE2-210ENST00000569108 CEP164Q9UPV0 1460 aa28.88■■■□□ 2.21
SPIRE2-210ENST00000569108 FGD5Q6ZNL6 1462 aa28.83■■■□□ 2.21
SPIRE2-210ENST00000569108 DNMBPQ6XZF7 1577 aa28.81■■■□□ 2.2
SPIRE2-210ENST00000569108 PPARGC1BQ86YN6 1023 aaKnown RBP28.81■■■□□ 2.2
SPIRE2-210ENST00000569108 TOPBP1Q92547 1522 aa28.8■■■□□ 2.2
SPIRE2-210ENST00000569108 KIF27Q86VH2 1401 aa28.76■■■□□ 2.19
SPIRE2-210ENST00000569108 URB2Q14146 1524 aaKnown RBP28.74■■■□□ 2.19
SPIRE2-210ENST00000569108 GOLGA3Q08378 1498 aa28.74■■■□□ 2.19
SPIRE2-210ENST00000569108 KIF21AQ7Z4S6 1674 aa28.73■■■□□ 2.19
SPIRE2-210ENST00000569108 UBTFP17480 764 aaKnown RBP28.71■■■□□ 2.19
SPIRE2-210ENST00000569108 TNIKQ9UKE5 1360 aa28.71■■■□□ 2.19
SPIRE2-210ENST00000569108 KIF21BO75037 1637 aa28.71■■■□□ 2.19
SPIRE2-210ENST00000569108 POLA1P09884 1462 aaPredicted RBP28.68■■■□□ 2.18
SPIRE2-210ENST00000569108 CUX2O14529 1486 aa28.68■■■□□ 2.18
SPIRE2-210ENST00000569108 RAD54L2Q9Y4B4 1467 aa28.63■■■□□ 2.17
SPIRE2-210ENST00000569108 RAPGEF2Q9Y4G8 1499 aa28.63■■■□□ 2.17
SPIRE2-210ENST00000569108 PRXQ9BXM0 1461 aa28.61■■■□□ 2.17
SPIRE2-210ENST00000569108 IGF1RP08069 1367 aa28.56■■■□□ 2.16
SPIRE2-210ENST00000569108 CEP162Q5TB80 1403 aa28.56■■■□□ 2.16
SPIRE2-210ENST00000569108 ABCA10Q8WWZ4 1543 aa28.56■■■□□ 2.16
SPIRE2-210ENST00000569108 MRC2Q9UBG0 1479 aa28.51■■■□□ 2.15
SPIRE2-210ENST00000569108 ERICH3Q5RHP9 1530 aa28.5■■■□□ 2.15
SPIRE2-210ENST00000569108 SCAF1Q9H7N4 1312 aaKnown RBP28.47■■■□□ 2.15
SPIRE2-210ENST00000569108 CARMIL1Q5VZK9 1371 aa28.4■■■□□ 2.14
SPIRE2-210ENST00000569108 ERCC6Q03468 1493 aa28.4■■■□□ 2.14
SPIRE2-210ENST00000569108 WDR97A6NE52 1622 aa28.38■■■□□ 2.13
SPIRE2-210ENST00000569108 TDRD9Q8NDG6 1382 aaKnown RBP28.37■■■□□ 2.13
SPIRE2-210ENST00000569108 PCGF6Q9BYE7 350 aa28.37■■■□□ 2.13
SPIRE2-210ENST00000569108 WDR62O43379 1518 aa28.34■■■□□ 2.13
SPIRE2-210ENST00000569108 TARBP1Q13395 1621 aaKnown RBP28.33■■■□□ 2.13
SPIRE2-210ENST00000569108 CLIP1P30622 1438 aa28.32■■■□□ 2.12
SPIRE2-210ENST00000569108 ABCA5Q8WWZ7 1642 aa28.27■■■□□ 2.12
SPIRE2-210ENST00000569108 GAPVD1Q14C86 1478 aa28.27■■■□□ 2.12
SPIRE2-210ENST00000569108 RANGAP1P46060 587 aaPredicted RBP28.27■■■□□ 2.12
SPIRE2-210ENST00000569108 THOC2Q8NI27 1593 aaKnown RBP28.22■■■□□ 2.11
SPIRE2-210ENST00000569108 IFT140Q96RY7 1462 aa28.18■■■□□ 2.1
SPIRE2-210ENST00000569108 TRIM26Q12899 539 aaPredicted RBP28.18■■■□□ 2.1
SPIRE2-210ENST00000569108 CUL7Q14999 1698 aa28.18■■■□□ 2.1
SPIRE2-210ENST00000569108 AQRO60306 1485 aaKnown RBP eCLIP28.16■■■□□ 2.11e-6■■□□□ 13.8
SPIRE2-210ENST00000569108 ZNF608Q9ULD9 1512 aaPredicted RBP28.1■■■□□ 2.09
SPIRE2-210ENST00000569108 VPS8Q8N3P4 1428 aa28.08■■■□□ 2.08
SPIRE2-210ENST00000569108 ARAP1Q96P48 1450 aa28.02■■■□□ 2.08
SPIRE2-210ENST00000569108 GRIN2BQ13224 1484 aa28.01■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms