RNA–Protein interactions for RNA: ENST00000334211.12

ARAP1-201, Transcript of ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ARAP1, Length 4,942 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARAP1-201ENST00000334211 NISCHQ9Y2I1 1504 aa24.15■■□□□ 1.46
ARAP1-201ENST00000334211 DCAF8L2P0C7V8 631 aa24.03■■□□□ 1.44
ARAP1-201ENST00000334211 SUPT5HO00267 1087 aaKnown RBP22.91■■□□□ 1.26
ARAP1-201ENST00000334211 SHROOM4Q9ULL8 1493 aa22.56■■□□□ 1.2
ARAP1-201ENST00000334211 EHMT2Q96KQ7 1210 aa21.8■■□□□ 1.08
ARAP1-201ENST00000334211 APLP2Q06481 763 aa21.72■■□□□ 1.07
ARAP1-201ENST00000334211 FAM9AQ8IZU1 332 aaPredicted RBP21.51■■□□□ 1.03
ARAP1-201ENST00000334211 TRIM41Q8WV44 630 aa21.36■■□□□ 1.01
ARAP1-201ENST00000334211 PELP1Q8IZL8 1130 aaKnown RBP21.33■■□□□ 1
ARAP1-201ENST00000334211 PCGF6Q9BYE7 350 aa21.27■■□□□ 1
ARAP1-201ENST00000334211 ZEB1P37275 1124 aaPredicted RBP21.13■□□□□ 0.97
ARAP1-201ENST00000334211 TTBK1Q5TCY1 1321 aaPredicted RBP21.08■□□□□ 0.97
ARAP1-201ENST00000334211 UBTFP17480 764 aaKnown RBP21.01■□□□□ 0.95
ARAP1-201ENST00000334211 RANGAP1P46060 587 aaPredicted RBP20.96■□□□□ 0.95
ARAP1-201ENST00000334211 CCER1Q8TC90 406 aaPredicted RBP20.91■□□□□ 0.94
ARAP1-201ENST00000334211 ATP1B4Q9UN42 357 aaPredicted RBP20.83■□□□□ 0.92
ARAP1-201ENST00000334211 CENPBP07199 599 aaPredicted RBP20.79■□□□□ 0.92
ARAP1-201ENST00000334211 TRIM26Q12899 539 aaPredicted RBP20.62■□□□□ 0.89
ARAP1-201ENST00000334211 CHIC1Q5VXU3 224 aa20.61■□□□□ 0.89
ARAP1-201ENST00000334211 PPARGC1BQ86YN6 1023 aaKnown RBP20.42■□□□□ 0.86
ARAP1-201ENST00000334211 LOC105371045A0A1W2PR82 267 aa20.38■□□□□ 0.85
ARAP1-201ENST00000334211 ABCC9O60706 1549 aa20.3■□□□□ 0.84
ARAP1-201ENST00000334211 HRCP23327 699 aa20.3■□□□□ 0.84
ARAP1-201ENST00000334211 NEFLP07196 543 aa20.3■□□□□ 0.84
ARAP1-201ENST00000334211 ERICH6Q7L0X2 663 aa20.24■□□□□ 0.83
ARAP1-201ENST00000334211 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.18■□□□□ 0.82
ARAP1-201ENST00000334211 HNRNPUL2Q1KMD3 747 aaKnown RBP20.18■□□□□ 0.82
ARAP1-201ENST00000334211 ZCCHC6Q5VYS8 1495 aaKnown RBP20.18■□□□□ 0.82
ARAP1-201ENST00000334211 ITGAEP38570 1179 aa20.16■□□□□ 0.82
ARAP1-201ENST00000334211 YTHDC1Q96MU7 727 aaKnown RBP20.16■□□□□ 0.82
ARAP1-201ENST00000334211 PABPN1Q86U42 306 aaKnown RBP eCLIP20.11■□□□□ 0.811e-6■■□□□ 12
ARAP1-201ENST00000334211 CCDC180Q9P1Z9 1646 aa20.03■□□□□ 0.8
ARAP1-201ENST00000334211 MYT1LQ9UL68 1186 aa19.98■□□□□ 0.79
ARAP1-201ENST00000334211 POLR3GLQ9BT43 218 aa19.83■□□□□ 0.77
ARAP1-201ENST00000334211 FAM50AQ14320 339 aaKnown RBP19.78■□□□□ 0.76
ARAP1-201ENST00000334211 MYT1Q01538 1121 aa19.75■□□□□ 0.75
ARAP1-201ENST00000334211 DIEXFQ68CQ4 756 aaKnown RBP19.72■□□□□ 0.75
ARAP1-201ENST00000334211 CSRNP3Q8WYN3 585 aa19.71■□□□□ 0.75
ARAP1-201ENST00000334211 TRIM52Q96A61 297 aa19.64■□□□□ 0.73
ARAP1-201ENST00000334211 SCRIBQ14160 1630 aa19.6■□□□□ 0.73
ARAP1-201ENST00000334211 DAXXQ9UER7 740 aaPredicted RBP19.55■□□□□ 0.72
ARAP1-201ENST00000334211 CNGB1Q14028 1251 aaPredicted RBP19.52■□□□□ 0.72
ARAP1-201ENST00000334211 NEUROD1Q13562 356 aa19.51■□□□□ 0.71
ARAP1-201ENST00000334211 FBLN2P98095 1184 aa19.47■□□□□ 0.71
ARAP1-201ENST00000334211 SLC4A1APQ9BWU0 796 aaKnown RBP19.44■□□□□ 0.7
ARAP1-201ENST00000334211 ZNF316A6NFI3 1004 aaPredicted RBP19.39■□□□□ 0.69
ARAP1-201ENST00000334211 ANP32CO43423 234 aa19.38■□□□□ 0.69
ARAP1-201ENST00000334211 DCAF1Q9Y4B6 1507 aa19.37■□□□□ 0.69
ARAP1-201ENST00000334211 P3H3Q8IVL6 736 aa19.37■□□□□ 0.69
ARAP1-201ENST00000334211 CDK11AQ9UQ88 783 aaPredicted RBP19.36■□□□□ 0.69
ARAP1-201ENST00000334211 MYO15BQ96JP2 1530 aa19.32■□□□□ 0.68
ARAP1-201ENST00000334211 ZNF326Q5BKZ1 582 aaKnown RBP19.29■□□□□ 0.68
ARAP1-201ENST00000334211 RSF1Q96T23 1441 aaPredicted RBP19.29■□□□□ 0.68
ARAP1-201ENST00000334211 RB1CC1Q8TDY2 1594 aa19.21■□□□□ 0.67
ARAP1-201ENST00000334211 CLSPNQ9HAW4 1339 aa19.21■□□□□ 0.67
ARAP1-201ENST00000334211 ARID3CA6NKF2 412 aa19.18■□□□□ 0.66
ARAP1-201ENST00000334211 ZNF777Q9ULD5 760 aaPredicted RBP19.15■□□□□ 0.66
ARAP1-201ENST00000334211 NACADO15069 1562 aa19.14■□□□□ 0.65
ARAP1-201ENST00000334211 GTF3C3Q9Y5Q9 886 aa19.13■□□□□ 0.65
ARAP1-201ENST00000334211 RTL5Q5HYW3 569 aaPredicted RBP19.1■□□□□ 0.65
ARAP1-201ENST00000334211 EEA1Q15075 1411 aa19.09■□□□□ 0.65
ARAP1-201ENST00000334211 TONSLQ96HA7 1378 aa19.07■□□□□ 0.64
ARAP1-201ENST00000334211 BCANQ96GW7 911 aa19■□□□□ 0.63
ARAP1-201ENST00000334211 ACIN1Q9UKV3 1341 aaKnown RBP19■□□□□ 0.63
ARAP1-201ENST00000334211 CLIP1P30622 1438 aa19■□□□□ 0.63
ARAP1-201ENST00000334211 NEFMP07197 916 aa18.98■□□□□ 0.63
ARAP1-201ENST00000334211 ZBTB47Q9UFB7 747 aaPredicted RBP18.95■□□□□ 0.62
ARAP1-201ENST00000334211 NPM1P06748 294 aaKnown RBP eCLIP18.94■□□□□ 0.62
ARAP1-201ENST00000334211 MTUS2Q5JR59 1369 aa18.94■□□□□ 0.62
ARAP1-201ENST00000334211 GOLGA3Q08378 1498 aa18.92■□□□□ 0.62
ARAP1-201ENST00000334211 CECR2Q9BXF3 1484 aa18.9■□□□□ 0.62
ARAP1-201ENST00000334211 WRNQ14191 1432 aaPredicted RBP eCLIP18.9■□□□□ 0.623e-14■■■■□ 23.5
ARAP1-201ENST00000334211 CANXP27824 592 aaKnown RBP18.89■□□□□ 0.61
ARAP1-201ENST00000334211 TSPY4P0CV99 314 aa18.88■□□□□ 0.61
ARAP1-201ENST00000334211 TSPY10P0CW01 314 aa18.88■□□□□ 0.61
ARAP1-201ENST00000334211 BAZ1BQ9UIG0 1483 aaKnown RBP18.87■□□□□ 0.61
ARAP1-201ENST00000334211 CHMP7Q8WUX9 453 aaPredicted RBP18.86■□□□□ 0.61
ARAP1-201ENST00000334211 ESF1Q9H501 851 aaKnown RBP18.86■□□□□ 0.61
ARAP1-201ENST00000334211 CHIC2Q9UKJ5 165 aa18.84■□□□□ 0.61
ARAP1-201ENST00000334211 CEP162Q5TB80 1403 aa18.83■□□□□ 0.61
ARAP1-201ENST00000334211 BAZ1AQ9NRL2 1556 aaPredicted RBP18.83■□□□□ 0.6
ARAP1-201ENST00000334211 DDX10Q13206 875 aaKnown RBP18.81■□□□□ 0.6
ARAP1-201ENST00000334211 KIF27Q86VH2 1401 aa18.8■□□□□ 0.6
ARAP1-201ENST00000334211 TNIKQ9UKE5 1360 aa18.8■□□□□ 0.6
ARAP1-201ENST00000334211 CHGAP10645 457 aaKnown RBP18.77■□□□□ 0.6
ARAP1-201ENST00000334211 CEP164Q9UPV0 1460 aa18.76■□□□□ 0.59
ARAP1-201ENST00000334211 STAG3Q9UJ98 1225 aa18.75■□□□□ 0.59
ARAP1-201ENST00000334211 HNRNPUQ00839 825 aaKnown RBP eCLIP18.74■□□□□ 0.59
ARAP1-201ENST00000334211 MROH2BQ7Z745 1585 aa18.73■□□□□ 0.59
ARAP1-201ENST00000334211 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.71■□□□□ 0.593e-7■■□□□ 14.4
ARAP1-201ENST00000334211 ANP32AP39687 249 aaKnown RBP18.69■□□□□ 0.58
ARAP1-201ENST00000334211 SLC24A1O60721 1099 aa18.68■□□□□ 0.58
ARAP1-201ENST00000334211 PLEKHD1A6NEE1 506 aa18.68■□□□□ 0.58
ARAP1-201ENST00000334211 TMC1Q8TDI8 760 aa18.67■□□□□ 0.58
ARAP1-201ENST00000334211 FAM9BQ8IZU0 186 aa18.66■□□□□ 0.58
ARAP1-201ENST00000334211 FKBP8Q14318 412 aa18.66■□□□□ 0.58
ARAP1-201ENST00000334211 EIF4G2P78344 907 aaKnown RBP eCLIP18.64■□□□□ 0.572e-7■■■■■ 33.9
ARAP1-201ENST00000334211 RRP7BPQ9NSQ0 103 aa18.61■□□□□ 0.57
ARAP1-201ENST00000334211 KDM2AQ9Y2K7 1162 aa18.59■□□□□ 0.57
ARAP1-201ENST00000334211 MRS2Q9HD23 443 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms