RNA–Protein interactions for RNA: ENST00000577802.1

CDK5RAP3-205, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 415 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-205ENST00000577802 NISCHQ9Y2I1 1504 aa30.93■■■□□ 2.54
CDK5RAP3-205ENST00000577802 CCDC180Q9P1Z9 1646 aa27.37■■□□□ 1.97
CDK5RAP3-205ENST00000577802 ZCCHC6Q5VYS8 1495 aaKnown RBP25.96■■□□□ 1.75
CDK5RAP3-205ENST00000577802 ABCC9O60706 1549 aa25.9■■□□□ 1.74
CDK5RAP3-205ENST00000577802 DCAF1Q9Y4B6 1507 aa25.73■■□□□ 1.71
CDK5RAP3-205ENST00000577802 MYO15BQ96JP2 1530 aa25.6■■□□□ 1.69
CDK5RAP3-205ENST00000577802 NACADO15069 1562 aa25.5■■□□□ 1.67
CDK5RAP3-205ENST00000577802 DCAF8L2P0C7V8 631 aa25.41■■□□□ 1.66
CDK5RAP3-205ENST00000577802 RB1CC1Q8TDY2 1594 aa25.38■■□□□ 1.65
CDK5RAP3-205ENST00000577802 SCRIBQ14160 1630 aa24.9■■□□□ 1.58
CDK5RAP3-205ENST00000577802 UNC13AQ9UPW8 1703 aa24.74■■□□□ 1.55
CDK5RAP3-205ENST00000577802 SHROOM4Q9ULL8 1493 aa24.72■■□□□ 1.55
CDK5RAP3-205ENST00000577802 BICRAQ9NZM4 1560 aa24.45■■□□□ 1.5
CDK5RAP3-205ENST00000577802 AEBP2Q6ZN18 517 aaPredicted RBP24.43■■□□□ 1.5
CDK5RAP3-205ENST00000577802 PABPN1Q86U42 306 aaKnown RBP eCLIP24.2■■□□□ 1.462e-11■■□□□ 12
CDK5RAP3-205ENST00000577802 BAZ1AQ9NRL2 1556 aaPredicted RBP24.02■■□□□ 1.44
CDK5RAP3-205ENST00000577802 CECR2Q9BXF3 1484 aa23.91■■□□□ 1.42
CDK5RAP3-205ENST00000577802 SMARCA4P51532 1647 aa23.91■■□□□ 1.42
CDK5RAP3-205ENST00000577802 CHIC1Q5VXU3 224 aa23.83■■□□□ 1.41
CDK5RAP3-205ENST00000577802 EIF4G1Q04637 1599 aaKnown RBP23.82■■□□□ 1.4
CDK5RAP3-205ENST00000577802 MROH2BQ7Z745 1585 aa23.8■■□□□ 1.4
CDK5RAP3-205ENST00000577802 RSF1Q96T23 1441 aaPredicted RBP23.76■■□□□ 1.39
CDK5RAP3-205ENST00000577802 PEG3Q9GZU2 1588 aa23.69■■□□□ 1.38
CDK5RAP3-205ENST00000577802 SMARCA2P51531 1590 aa23.66■■□□□ 1.38
CDK5RAP3-205ENST00000577802 WIZO95785 1651 aa23.6■■□□□ 1.37
CDK5RAP3-205ENST00000577802 SUPT5HO00267 1087 aaKnown RBP23.6■■□□□ 1.37
CDK5RAP3-205ENST00000577802 ATAD2BQ9ULI0 1458 aa23.54■■□□□ 1.36
CDK5RAP3-205ENST00000577802 CC2D2AQ9P2K1 1620 aa23.52■■□□□ 1.36
CDK5RAP3-205ENST00000577802 HMGXB3Q12766 1538 aa23.49■■□□□ 1.35
CDK5RAP3-205ENST00000577802 TOP2AP11388 1531 aaKnown RBP23.49■■□□□ 1.35
CDK5RAP3-205ENST00000577802 BAZ1BQ9UIG0 1483 aaKnown RBP23.45■■□□□ 1.34
CDK5RAP3-205ENST00000577802 NCAPD3P42695 1498 aa23.43■■□□□ 1.34
CDK5RAP3-205ENST00000577802 CCDC88BA6NC98 1476 aa23.09■■□□□ 1.29
CDK5RAP3-205ENST00000577802 DNAJC5BQ9UF47 199 aa22.93■■□□□ 1.26
CDK5RAP3-205ENST00000577802 PRDM2Q13029 1718 aa22.85■■□□□ 1.25
CDK5RAP3-205ENST00000577802 LAMC3Q9Y6N6 1575 aa22.81■■□□□ 1.24
CDK5RAP3-205ENST00000577802 CFTRP13569 1480 aa22.8■■□□□ 1.24
CDK5RAP3-205ENST00000577802 CADPSQ9ULU8 1353 aa22.77■■□□□ 1.24
CDK5RAP3-205ENST00000577802 PDS5BQ9NTI5 1447 aa22.58■■□□□ 1.21
CDK5RAP3-205ENST00000577802 NESP48681 1621 aa22.57■■□□□ 1.2
CDK5RAP3-205ENST00000577802 FANCD2Q9BXW9 1451 aa22.54■■□□□ 1.2
CDK5RAP3-205ENST00000577802 CEP164Q9UPV0 1460 aa22.51■■□□□ 1.19
CDK5RAP3-205ENST00000577802 WRNQ14191 1432 aaPredicted RBP eCLIP22.47■■□□□ 1.19
CDK5RAP3-205ENST00000577802 ABCC8Q09428 1581 aa22.46■■□□□ 1.19
CDK5RAP3-205ENST00000577802 KIF21AQ7Z4S6 1674 aa22.46■■□□□ 1.19
CDK5RAP3-205ENST00000577802 BIVM-ERCC5R4GMW8 1640 aa22.4■■□□□ 1.18
CDK5RAP3-205ENST00000577802 TOP2BQ02880 1626 aa22.39■■□□□ 1.17
CDK5RAP3-205ENST00000577802 ERCC6Q03468 1493 aa22.38■■□□□ 1.17
CDK5RAP3-205ENST00000577802 DNMBPQ6XZF7 1577 aa22.36■■□□□ 1.17
CDK5RAP3-205ENST00000577802 SYNJ1O43426 1573 aa22.35■■□□□ 1.17
CDK5RAP3-205ENST00000577802 TRIM41Q8WV44 630 aa22.33■■□□□ 1.17
CDK5RAP3-205ENST00000577802 MRC2Q9UBG0 1479 aa22.32■■□□□ 1.16
CDK5RAP3-205ENST00000577802 CUX1P39880 1505 aa22.31■■□□□ 1.16
CDK5RAP3-205ENST00000577802 TOPBP1Q92547 1522 aa22.26■■□□□ 1.15
CDK5RAP3-205ENST00000577802 URB2Q14146 1524 aaKnown RBP22.24■■□□□ 1.15
CDK5RAP3-205ENST00000577802 THOC2Q8NI27 1593 aaKnown RBP22.24■■□□□ 1.15
CDK5RAP3-205ENST00000577802 WDR62O43379 1518 aa22.23■■□□□ 1.15
CDK5RAP3-205ENST00000577802 FGD5Q6ZNL6 1462 aa22.16■■□□□ 1.14
CDK5RAP3-205ENST00000577802 POLA1P09884 1462 aaPredicted RBP22.1■■□□□ 1.13
CDK5RAP3-205ENST00000577802 EEA1Q15075 1411 aa22.07■■□□□ 1.12
CDK5RAP3-205ENST00000577802 WDR97A6NE52 1622 aa22.02■■□□□ 1.12
CDK5RAP3-205ENST00000577802 ABCA10Q8WWZ4 1543 aa22.01■■□□□ 1.11
CDK5RAP3-205ENST00000577802 IFT140Q96RY7 1462 aa22■■□□□ 1.11
CDK5RAP3-205ENST00000577802 SOGA1O94964 1423 aa21.99■■□□□ 1.11
CDK5RAP3-205ENST00000577802 TARBP1Q13395 1621 aaKnown RBP21.97■■□□□ 1.11
CDK5RAP3-205ENST00000577802 KIF27Q86VH2 1401 aa21.97■■□□□ 1.11
CDK5RAP3-205ENST00000577802 CUX2O14529 1486 aa21.93■■□□□ 1.1
CDK5RAP3-205ENST00000577802 RAD54L2Q9Y4B4 1467 aa21.92■■□□□ 1.1
CDK5RAP3-205ENST00000577802 ABCA5Q8WWZ7 1642 aa21.89■■□□□ 1.09
CDK5RAP3-205ENST00000577802 ERICH3Q5RHP9 1530 aa21.8■■□□□ 1.08
CDK5RAP3-205ENST00000577802 CUL7Q14999 1698 aa21.8■■□□□ 1.08
CDK5RAP3-205ENST00000577802 PBRM1Q86U86 1689 aa21.8■■□□□ 1.08
CDK5RAP3-205ENST00000577802 EIF4G3O43432 1585 aaKnown RBP21.8■■□□□ 1.08
CDK5RAP3-205ENST00000577802 GAPVD1Q14C86 1478 aa21.8■■□□□ 1.08
CDK5RAP3-205ENST00000577802 RUSC2Q8N2Y8 1516 aa21.79■■□□□ 1.08
CDK5RAP3-205ENST00000577802 KIF21BO75037 1637 aa21.78■■□□□ 1.08
CDK5RAP3-205ENST00000577802 FAM9AQ8IZU1 332 aaPredicted RBP21.75■■□□□ 1.07
CDK5RAP3-205ENST00000577802 CSRNP3Q8WYN3 585 aa21.75■■□□□ 1.07
CDK5RAP3-205ENST00000577802 GRIN2BQ13224 1484 aa21.73■■□□□ 1.07
CDK5RAP3-205ENST00000577802 TDRD9Q8NDG6 1382 aaKnown RBP21.73■■□□□ 1.07
CDK5RAP3-205ENST00000577802 ZNF608Q9ULD9 1512 aaPredicted RBP21.71■■□□□ 1.07
CDK5RAP3-205ENST00000577802 GOLGA3Q08378 1498 aa21.68■■□□□ 1.06
CDK5RAP3-205ENST00000577802 AQRO60306 1485 aaKnown RBP eCLIP21.66■■□□□ 1.069e-9■■■■□ 25
CDK5RAP3-205ENST00000577802 PRXQ9BXM0 1461 aa21.66■■□□□ 1.06
CDK5RAP3-205ENST00000577802 IGF1RP08069 1367 aa21.66■■□□□ 1.06
CDK5RAP3-205ENST00000577802 ADAMTS12P58397 1594 aa21.65■■□□□ 1.06
CDK5RAP3-205ENST00000577802 MAGI1Q96QZ7 1491 aaPredicted RBP21.64■■□□□ 1.06
CDK5RAP3-205ENST00000577802 RAPGEF2Q9Y4G8 1499 aa21.62■■□□□ 1.05
CDK5RAP3-205ENST00000577802 CARMIL1Q5VZK9 1371 aa21.6■■□□□ 1.05
CDK5RAP3-205ENST00000577802 FHAD1B1AJZ9 1412 aa21.59■■□□□ 1.05
CDK5RAP3-205ENST00000577802 SNAPC4Q5SXM2 1469 aa21.58■■□□□ 1.05
CDK5RAP3-205ENST00000577802 SYNJ2O15056 1496 aa21.52■■□□□ 1.03
CDK5RAP3-205ENST00000577802 CTTNBP2Q8WZ74 1663 aa21.47■■□□□ 1.03
CDK5RAP3-205ENST00000577802 TNIKQ9UKE5 1360 aa21.47■■□□□ 1.03
CDK5RAP3-205ENST00000577802 GRIN2AQ12879 1464 aa21.45■■□□□ 1.02
CDK5RAP3-205ENST00000577802 UBTFP17480 764 aaKnown RBP21.43■■□□□ 1.02
CDK5RAP3-205ENST00000577802 LOC105371045A0A1W2PR82 267 aa21.4■■□□□ 1.02
CDK5RAP3-205ENST00000577802 CHD1O14646 1710 aa21.38■■□□□ 1.01
CDK5RAP3-205ENST00000577802 CHMP7Q8WUX9 453 aaPredicted RBP21.37■■□□□ 1.01
CDK5RAP3-205ENST00000577802 EHMT2Q96KQ7 1210 aa21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms