RNA–Protein interactions for RNA: ENST00000600231.5

GRAMD1A-212, Transcript of GRAM domain containing 1A, humanhuman

TSL 2

Gene GRAMD1A, Length 2,534 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1A-212ENST00000600231 NISCHQ9Y2I1 1504 aa46.73■■■■■ 5.07
GRAMD1A-212ENST00000600231 CCDC180Q9P1Z9 1646 aa40.12■■■■■ 4.01
GRAMD1A-212ENST00000600231 ZCCHC6Q5VYS8 1495 aaKnown RBP39.41■■■■□ 3.9
GRAMD1A-212ENST00000600231 SHROOM4Q9ULL8 1493 aa39.14■■■■□ 3.86
GRAMD1A-212ENST00000600231 DCAF8L2P0C7V8 631 aa38.74■■■■□ 3.79
GRAMD1A-212ENST00000600231 DCAF1Q9Y4B6 1507 aa38.45■■■■□ 3.75
GRAMD1A-212ENST00000600231 SUPT5HO00267 1087 aaKnown RBP38.09■■■■□ 3.69
GRAMD1A-212ENST00000600231 MYO15BQ96JP2 1530 aa37.62■■■■□ 3.61
GRAMD1A-212ENST00000600231 ABCC9O60706 1549 aa37.56■■■■□ 3.6
GRAMD1A-212ENST00000600231 SCRIBQ14160 1630 aa37.33■■■■□ 3.57
GRAMD1A-212ENST00000600231 NACADO15069 1562 aa37.24■■■■□ 3.55
GRAMD1A-212ENST00000600231 CHIC1Q5VXU3 224 aa36.8■■■■□ 3.48
GRAMD1A-212ENST00000600231 RB1CC1Q8TDY2 1594 aa36.74■■■■□ 3.47
GRAMD1A-212ENST00000600231 RSF1Q96T23 1441 aaPredicted RBP36.69■■■■□ 3.46
GRAMD1A-212ENST00000600231 CECR2Q9BXF3 1484 aa36.42■■■■□ 3.42
GRAMD1A-212ENST00000600231 MROH2BQ7Z745 1585 aa36.25■■■■□ 3.39
GRAMD1A-212ENST00000600231 UNC13AQ9UPW8 1703 aa36.14■■■■□ 3.38
GRAMD1A-212ENST00000600231 WIZO95785 1651 aa36■■■■□ 3.35
GRAMD1A-212ENST00000600231 BAZ1AQ9NRL2 1556 aaPredicted RBP35.96■■■■□ 3.35
GRAMD1A-212ENST00000600231 PABPN1Q86U42 306 aaKnown RBP eCLIP35.74■■■■□ 3.311e-6■■□□□ 12.1
GRAMD1A-212ENST00000600231 BICRAQ9NZM4 1560 aa35.74■■■■□ 3.31
GRAMD1A-212ENST00000600231 SMARCA4P51532 1647 aa35.72■■■■□ 3.31
GRAMD1A-212ENST00000600231 TRIM41Q8WV44 630 aa35.61■■■■□ 3.29
GRAMD1A-212ENST00000600231 LOC105371045A0A1W2PR82 267 aa35.6■■■■□ 3.29
GRAMD1A-212ENST00000600231 TOP2AP11388 1531 aaKnown RBP35.5■■■■□ 3.27
GRAMD1A-212ENST00000600231 CCDC88BA6NC98 1476 aa35.29■■■■□ 3.24
GRAMD1A-212ENST00000600231 EIF4G1Q04637 1599 aaKnown RBP35.27■■■■□ 3.24
GRAMD1A-212ENST00000600231 SMARCA2P51531 1590 aa35.26■■■■□ 3.24
GRAMD1A-212ENST00000600231 FAM9AQ8IZU1 332 aaPredicted RBP35.18■■■■□ 3.22
GRAMD1A-212ENST00000600231 PEG3Q9GZU2 1588 aa35.14■■■■□ 3.22
GRAMD1A-212ENST00000600231 ATAD2BQ9ULI0 1458 aa34.97■■■■□ 3.19
GRAMD1A-212ENST00000600231 ABCC8Q09428 1581 aa34.92■■■■□ 3.18
GRAMD1A-212ENST00000600231 PCGF6Q9BYE7 350 aa34.88■■■■□ 3.17
GRAMD1A-212ENST00000600231 BAZ1BQ9UIG0 1483 aaKnown RBP34.81■■■■□ 3.16
GRAMD1A-212ENST00000600231 EHMT2Q96KQ7 1210 aa34.8■■■■□ 3.16
GRAMD1A-212ENST00000600231 WRNQ14191 1432 aaPredicted RBP eCLIP34.49■■■■□ 3.119e-6■■■■■ 50.1
GRAMD1A-212ENST00000600231 SOGA1O94964 1423 aa34.47■■■■□ 3.11
GRAMD1A-212ENST00000600231 TRIM26Q12899 539 aaPredicted RBP34.47■■■■□ 3.11
GRAMD1A-212ENST00000600231 HRCP23327 699 aa34.46■■■■□ 3.11
GRAMD1A-212ENST00000600231 NCAPD3P42695 1498 aa34.45■■■■□ 3.11
GRAMD1A-212ENST00000600231 HMGXB3Q12766 1538 aa34.39■■■■□ 3.1
GRAMD1A-212ENST00000600231 RUSC2Q8N2Y8 1516 aa34.33■■■■□ 3.09
GRAMD1A-212ENST00000600231 SYNJ1O43426 1573 aa34.32■■■■□ 3.08
GRAMD1A-212ENST00000600231 EEA1Q15075 1411 aa34.3■■■■□ 3.08
GRAMD1A-212ENST00000600231 CSRNP3Q8WYN3 585 aa34.26■■■■□ 3.08
GRAMD1A-212ENST00000600231 TNIKQ9UKE5 1360 aa34.06■■■■□ 3.04
GRAMD1A-212ENST00000600231 CEP162Q5TB80 1403 aa34.01■■■■□ 3.04
GRAMD1A-212ENST00000600231 TOP2BQ02880 1626 aa34.01■■■■□ 3.03
GRAMD1A-212ENST00000600231 UBTFP17480 764 aaKnown RBP34■■■■□ 3.03
GRAMD1A-212ENST00000600231 GOLGA3Q08378 1498 aa33.97■■■■□ 3.03
GRAMD1A-212ENST00000600231 CFTRP13569 1480 aa33.97■■■■□ 3.03
GRAMD1A-212ENST00000600231 PPARGC1BQ86YN6 1023 aaKnown RBP33.95■■■■□ 3.03
GRAMD1A-212ENST00000600231 BIVM-ERCC5R4GMW8 1640 aa33.91■■■■□ 3.02
GRAMD1A-212ENST00000600231 CC2D2AQ9P2K1 1620 aa33.88■■■■□ 3.01
GRAMD1A-212ENST00000600231 CEP164Q9UPV0 1460 aa33.87■■■■□ 3.01
GRAMD1A-212ENST00000600231 KIF21BO75037 1637 aa33.83■■■■□ 3.01
GRAMD1A-212ENST00000600231 CUX1P39880 1505 aa33.8■■■■□ 3
GRAMD1A-212ENST00000600231 CADPSQ9ULU8 1353 aa33.71■■■□□ 2.99
GRAMD1A-212ENST00000600231 RAPGEF2Q9Y4G8 1499 aa33.68■■■□□ 2.98
GRAMD1A-212ENST00000600231 PRDM2Q13029 1718 aa33.67■■■□□ 2.98
GRAMD1A-212ENST00000600231 CLIP1P30622 1438 aa33.54■■■□□ 2.96
GRAMD1A-212ENST00000600231 TTBK1Q5TCY1 1321 aaPredicted RBP33.52■■■□□ 2.96
GRAMD1A-212ENST00000600231 KIF27Q86VH2 1401 aa33.5■■■□□ 2.95
GRAMD1A-212ENST00000600231 PRXQ9BXM0 1461 aa33.5■■■□□ 2.95
GRAMD1A-212ENST00000600231 ERICH3Q5RHP9 1530 aa33.43■■■□□ 2.94
GRAMD1A-212ENST00000600231 ZEB1P37275 1124 aaPredicted RBP33.43■■■□□ 2.94
GRAMD1A-212ENST00000600231 RANGAP1P46060 587 aaPredicted RBP33.38■■■□□ 2.93
GRAMD1A-212ENST00000600231 FANCD2Q9BXW9 1451 aa33.35■■■□□ 2.93
GRAMD1A-212ENST00000600231 VPS8Q8N3P4 1428 aa33.32■■■□□ 2.93
GRAMD1A-212ENST00000600231 FGD5Q6ZNL6 1462 aa33.3■■■□□ 2.92
GRAMD1A-212ENST00000600231 CUX2O14529 1486 aa33.28■■■□□ 2.92
GRAMD1A-212ENST00000600231 NESP48681 1621 aa33.28■■■□□ 2.92
GRAMD1A-212ENST00000600231 IGF1RP08069 1367 aa33.19■■■□□ 2.9
GRAMD1A-212ENST00000600231 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.16■■■□□ 2.9
GRAMD1A-212ENST00000600231 DNAJC5BQ9UF47 199 aa33.12■■■□□ 2.89
GRAMD1A-212ENST00000600231 DNMBPQ6XZF7 1577 aa33.11■■■□□ 2.89
GRAMD1A-212ENST00000600231 APLP2Q06481 763 aa33.1■■■□□ 2.89
GRAMD1A-212ENST00000600231 ARAP1Q96P48 1450 aa33.08■■■□□ 2.89
GRAMD1A-212ENST00000600231 LAMC3Q9Y6N6 1575 aa33.08■■■□□ 2.89
GRAMD1A-212ENST00000600231 TOPBP1Q92547 1522 aa33.07■■■□□ 2.88
GRAMD1A-212ENST00000600231 CCER1Q8TC90 406 aaPredicted RBP33.04■■■□□ 2.88
GRAMD1A-212ENST00000600231 CARMIL1Q5VZK9 1371 aa33.03■■■□□ 2.88
GRAMD1A-212ENST00000600231 POLA1P09884 1462 aaPredicted RBP33.01■■■□□ 2.88
GRAMD1A-212ENST00000600231 RAD54L2Q9Y4B4 1467 aa33.01■■■□□ 2.88
GRAMD1A-212ENST00000600231 ABCA10Q8WWZ4 1543 aa32.94■■■□□ 2.86
GRAMD1A-212ENST00000600231 ARHGAP35Q9NRY4 1499 aa32.93■■■□□ 2.86
GRAMD1A-212ENST00000600231 URB2Q14146 1524 aaKnown RBP32.9■■■□□ 2.86
GRAMD1A-212ENST00000600231 PDS5BQ9NTI5 1447 aa32.87■■■□□ 2.85
GRAMD1A-212ENST00000600231 HNRNPUL2Q1KMD3 747 aaKnown RBP32.79■■■□□ 2.84
GRAMD1A-212ENST00000600231 KANK4Q5T7N3 995 aaPredicted RBP32.78■■■□□ 2.84
GRAMD1A-212ENST00000600231 KIF21AQ7Z4S6 1674 aa32.73■■■□□ 2.83
GRAMD1A-212ENST00000600231 WDR97A6NE52 1622 aa32.69■■■□□ 2.82
GRAMD1A-212ENST00000600231 TDRD9Q8NDG6 1382 aaKnown RBP32.65■■■□□ 2.82
GRAMD1A-212ENST00000600231 CUL7Q14999 1698 aa32.65■■■□□ 2.82
GRAMD1A-212ENST00000600231 ABCA5Q8WWZ7 1642 aa32.57■■■□□ 2.81
GRAMD1A-212ENST00000600231 GAPVD1Q14C86 1478 aa32.55■■■□□ 2.8
GRAMD1A-212ENST00000600231 P3H3Q8IVL6 736 aa32.54■■■□□ 2.8
GRAMD1A-212ENST00000600231 TARBP1Q13395 1621 aaKnown RBP32.46■■■□□ 2.79
GRAMD1A-212ENST00000600231 FHAD1B1AJZ9 1412 aa32.46■■■□□ 2.79
GRAMD1A-212ENST00000600231 RRBP1Q9P2E9 1410 aaKnown RBP32.46■■■□□ 2.79
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms