RNA–Protein interactions for RNA: ENST00000488340.5

CCNL2-216, Transcript of cyclin L2, humanhuman

TSL 2

Gene CCNL2, Length 1,598 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL2-216ENST00000488340 NISCHQ9Y2I1 1504 aa51.56■■■■■ 5.84
CCNL2-216ENST00000488340 CCDC180Q9P1Z9 1646 aa45.42■■■■■ 4.86
CCNL2-216ENST00000488340 ABCC9O60706 1549 aa43.37■■■■■ 4.53
CCNL2-216ENST00000488340 ZCCHC6Q5VYS8 1495 aaKnown RBP43.2■■■■■ 4.51
CCNL2-216ENST00000488340 DCAF1Q9Y4B6 1507 aa42.73■■■■■ 4.43
CCNL2-216ENST00000488340 DCAF8L2P0C7V8 631 aa42.59■■■■■ 4.41
CCNL2-216ENST00000488340 MYO15BQ96JP2 1530 aa42.52■■■■■ 4.4
CCNL2-216ENST00000488340 NACADO15069 1562 aa42.42■■■■■ 4.38
CCNL2-216ENST00000488340 RB1CC1Q8TDY2 1594 aa42.21■■■■■ 4.35
CCNL2-216ENST00000488340 SCRIBQ14160 1630 aa41.52■■■■■ 4.24
CCNL2-216ENST00000488340 SHROOM4Q9ULL8 1493 aa41.36■■■■■ 4.21
CCNL2-216ENST00000488340 UNC13AQ9UPW8 1703 aa41.32■■■■■ 4.21
CCNL2-216ENST00000488340 BICRAQ9NZM4 1560 aa40.89■■■■■ 4.14
CCNL2-216ENST00000488340 PABPN1Q86U42 306 aaKnown RBP eCLIP40.67■■■■■ 4.19e-15■■□□□ 12.1
CCNL2-216ENST00000488340 CECR2Q9BXF3 1484 aa40.03■■■■■ 4
CCNL2-216ENST00000488340 BAZ1AQ9NRL2 1556 aaPredicted RBP39.92■■■■□ 3.98
CCNL2-216ENST00000488340 SMARCA4P51532 1647 aa39.81■■■■□ 3.96
CCNL2-216ENST00000488340 MROH2BQ7Z745 1585 aa39.75■■■■□ 3.95
CCNL2-216ENST00000488340 EIF4G1Q04637 1599 aaKnown RBP39.74■■■■□ 3.95
CCNL2-216ENST00000488340 RSF1Q96T23 1441 aaPredicted RBP39.67■■■■□ 3.94
CCNL2-216ENST00000488340 SUPT5HO00267 1087 aaKnown RBP39.43■■■■□ 3.9
CCNL2-216ENST00000488340 PEG3Q9GZU2 1588 aa39.41■■■■□ 3.9
CCNL2-216ENST00000488340 WIZO95785 1651 aa39.41■■■■□ 3.9
CCNL2-216ENST00000488340 SMARCA2P51531 1590 aa39.32■■■■□ 3.88
CCNL2-216ENST00000488340 CC2D2AQ9P2K1 1620 aa39.31■■■■□ 3.88
CCNL2-216ENST00000488340 ATAD2BQ9ULI0 1458 aa39.29■■■■□ 3.88
CCNL2-216ENST00000488340 NCAPD3P42695 1498 aa39.1■■■■□ 3.85
CCNL2-216ENST00000488340 HMGXB3Q12766 1538 aa39.05■■■■□ 3.84
CCNL2-216ENST00000488340 BAZ1BQ9UIG0 1483 aaKnown RBP39.05■■■■□ 3.84
CCNL2-216ENST00000488340 TOP2AP11388 1531 aaKnown RBP39.05■■■■□ 3.84
CCNL2-216ENST00000488340 DNAJC5BQ9UF47 199 aa38.78■■■■□ 3.8
CCNL2-216ENST00000488340 CCDC88BA6NC98 1476 aa38.56■■■■□ 3.76
CCNL2-216ENST00000488340 CFTRP13569 1480 aa38.03■■■■□ 3.68
CCNL2-216ENST00000488340 CADPSQ9ULU8 1353 aa38.01■■■■□ 3.68
CCNL2-216ENST00000488340 LAMC3Q9Y6N6 1575 aa37.94■■■■□ 3.66
CCNL2-216ENST00000488340 PRDM2Q13029 1718 aa37.91■■■■□ 3.66
CCNL2-216ENST00000488340 NESP48681 1621 aa37.85■■■■□ 3.65
CCNL2-216ENST00000488340 PDS5BQ9NTI5 1447 aa37.61■■■■□ 3.61
CCNL2-216ENST00000488340 FANCD2Q9BXW9 1451 aa37.6■■■■□ 3.61
CCNL2-216ENST00000488340 ABCC8Q09428 1581 aa37.5■■■■□ 3.59
CCNL2-216ENST00000488340 KIF21AQ7Z4S6 1674 aa37.48■■■■□ 3.59
CCNL2-216ENST00000488340 CEP164Q9UPV0 1460 aa37.46■■■■□ 3.59
CCNL2-216ENST00000488340 CHIC1Q5VXU3 224 aa37.42■■■■□ 3.58
CCNL2-216ENST00000488340 WRNQ14191 1432 aaPredicted RBP eCLIP37.39■■■■□ 3.58
CCNL2-216ENST00000488340 ERCC6Q03468 1493 aa37.31■■■■□ 3.56
CCNL2-216ENST00000488340 SYNJ1O43426 1573 aa37.27■■■■□ 3.56
CCNL2-216ENST00000488340 CUX1P39880 1505 aa37.24■■■■□ 3.55
CCNL2-216ENST00000488340 TOP2BQ02880 1626 aa37.22■■■■□ 3.55
CCNL2-216ENST00000488340 BIVM-ERCC5R4GMW8 1640 aa37.22■■■■□ 3.55
CCNL2-216ENST00000488340 TRIM41Q8WV44 630 aa37.21■■■■□ 3.55
CCNL2-216ENST00000488340 DNMBPQ6XZF7 1577 aa37.19■■■■□ 3.54
CCNL2-216ENST00000488340 MRC2Q9UBG0 1479 aa37.18■■■■□ 3.54
CCNL2-216ENST00000488340 URB2Q14146 1524 aaKnown RBP37.16■■■■□ 3.54
CCNL2-216ENST00000488340 TOPBP1Q92547 1522 aa37.12■■■■□ 3.53
CCNL2-216ENST00000488340 THOC2Q8NI27 1593 aaKnown RBP37.09■■■■□ 3.53
CCNL2-216ENST00000488340 WDR62O43379 1518 aa37.04■■■■□ 3.52
CCNL2-216ENST00000488340 FGD5Q6ZNL6 1462 aa36.95■■■■□ 3.51
CCNL2-216ENST00000488340 POLA1P09884 1462 aaPredicted RBP36.88■■■■□ 3.5
CCNL2-216ENST00000488340 SOGA1O94964 1423 aa36.72■■■■□ 3.47
CCNL2-216ENST00000488340 CUX2O14529 1486 aa36.7■■■■□ 3.46
CCNL2-216ENST00000488340 RAD54L2Q9Y4B4 1467 aa36.69■■■■□ 3.46
CCNL2-216ENST00000488340 TARBP1Q13395 1621 aaKnown RBP36.66■■■■□ 3.46
CCNL2-216ENST00000488340 ABCA10Q8WWZ4 1543 aa36.64■■■■□ 3.46
CCNL2-216ENST00000488340 WDR97A6NE52 1622 aa36.64■■■■□ 3.46
CCNL2-216ENST00000488340 IFT140Q96RY7 1462 aa36.62■■■■□ 3.45
CCNL2-216ENST00000488340 EEA1Q15075 1411 aa36.54■■■■□ 3.44
CCNL2-216ENST00000488340 KIF27Q86VH2 1401 aa36.52■■■■□ 3.44
CCNL2-216ENST00000488340 RUSC2Q8N2Y8 1516 aa36.5■■■■□ 3.43
CCNL2-216ENST00000488340 ABCA5Q8WWZ7 1642 aa36.43■■■■□ 3.42
CCNL2-216ENST00000488340 FAM9AQ8IZU1 332 aaPredicted RBP36.4■■■■□ 3.42
CCNL2-216ENST00000488340 TDRD9Q8NDG6 1382 aaKnown RBP36.38■■■■□ 3.41
CCNL2-216ENST00000488340 ZNF608Q9ULD9 1512 aaPredicted RBP36.37■■■■□ 3.41
CCNL2-216ENST00000488340 GAPVD1Q14C86 1478 aa36.33■■■■□ 3.41
CCNL2-216ENST00000488340 EIF4G3O43432 1585 aaKnown RBP36.32■■■■□ 3.4
CCNL2-216ENST00000488340 AQRO60306 1485 aaKnown RBP eCLIP36.28■■■■□ 3.43e-7■■■□□ 16.9
CCNL2-216ENST00000488340 CSRNP3Q8WYN3 585 aa36.27■■■■□ 3.4
CCNL2-216ENST00000488340 PBRM1Q86U86 1689 aa36.25■■■■□ 3.39
CCNL2-216ENST00000488340 ERICH3Q5RHP9 1530 aa36.24■■■■□ 3.39
CCNL2-216ENST00000488340 IGF1RP08069 1367 aa36.21■■■■□ 3.39
CCNL2-216ENST00000488340 GRIN2BQ13224 1484 aa36.18■■■■□ 3.38
CCNL2-216ENST00000488340 CUL7Q14999 1698 aa36.14■■■■□ 3.38
CCNL2-216ENST00000488340 KIF21BO75037 1637 aa36.11■■■■□ 3.37
CCNL2-216ENST00000488340 PRXQ9BXM0 1461 aa36.09■■■■□ 3.37
CCNL2-216ENST00000488340 CARMIL1Q5VZK9 1371 aa36.03■■■■□ 3.36
CCNL2-216ENST00000488340 ADAMTS12P58397 1594 aa36■■■■□ 3.35
CCNL2-216ENST00000488340 SNAPC4Q5SXM2 1469 aa36■■■■□ 3.35
CCNL2-216ENST00000488340 MAGI1Q96QZ7 1491 aaPredicted RBP36■■■■□ 3.35
CCNL2-216ENST00000488340 GOLGA3Q08378 1498 aa35.95■■■■□ 3.35
CCNL2-216ENST00000488340 RAPGEF2Q9Y4G8 1499 aa35.95■■■■□ 3.35
CCNL2-216ENST00000488340 FHAD1B1AJZ9 1412 aa35.95■■■■□ 3.35
CCNL2-216ENST00000488340 LOC105371045A0A1W2PR82 267 aa35.88■■■■□ 3.33
CCNL2-216ENST00000488340 EHMT2Q96KQ7 1210 aa35.84■■■■□ 3.33
CCNL2-216ENST00000488340 SYNJ2O15056 1496 aa35.83■■■■□ 3.33
CCNL2-216ENST00000488340 GRIN2AQ12879 1464 aa35.73■■■■□ 3.31
CCNL2-216ENST00000488340 UBTFP17480 764 aaKnown RBP35.72■■■■□ 3.31
CCNL2-216ENST00000488340 CHMP7Q8WUX9 453 aaPredicted RBP35.69■■■■□ 3.3
CCNL2-216ENST00000488340 TNIKQ9UKE5 1360 aa35.68■■■■□ 3.3
CCNL2-216ENST00000488340 CHD1O14646 1710 aa35.66■■■■□ 3.3
CCNL2-216ENST00000488340 CTTNBP2Q8WZ74 1663 aa35.62■■■■□ 3.29
CCNL2-216ENST00000488340 FBLN2P98095 1184 aa35.62■■■■□ 3.29
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms