RNA–Protein interactions for RNA: ENST00000504411.1

TGFBI-204, Transcript of transforming growth factor beta induced, humanhuman

TSL 2

Gene TGFBI, Length 1,033 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBI-204ENST00000504411 NISCHQ9Y2I1 1504 aa21.2■□□□□ 0.98
TGFBI-204ENST00000504411 CCDC180Q9P1Z9 1646 aa18.64■□□□□ 0.57
TGFBI-204ENST00000504411 ZCCHC6Q5VYS8 1495 aaKnown RBP17.85■□□□□ 0.45
TGFBI-204ENST00000504411 DCAF1Q9Y4B6 1507 aa17.62■□□□□ 0.41
TGFBI-204ENST00000504411 MYO15BQ96JP2 1530 aa17.4■□□□□ 0.38
TGFBI-204ENST00000504411 ABCC9O60706 1549 aa17.33■□□□□ 0.37
TGFBI-204ENST00000504411 NACADO15069 1562 aa17.25■□□□□ 0.35
TGFBI-204ENST00000504411 DCAF8L2P0C7V8 631 aa17.24■□□□□ 0.35
TGFBI-204ENST00000504411 SHROOM4Q9ULL8 1493 aa17.15■□□□□ 0.34
TGFBI-204ENST00000504411 RB1CC1Q8TDY2 1594 aa17.09■□□□□ 0.33
TGFBI-204ENST00000504411 SCRIBQ14160 1630 aa16.99■□□□□ 0.31
TGFBI-204ENST00000504411 UNC13AQ9UPW8 1703 aa16.83■□□□□ 0.28
TGFBI-204ENST00000504411 BICRAQ9NZM4 1560 aa16.53■□□□□ 0.24
TGFBI-204ENST00000504411 SUPT5HO00267 1087 aaKnown RBP16.5■□□□□ 0.23
TGFBI-204ENST00000504411 BAZ1AQ9NRL2 1556 aaPredicted RBP16.41■□□□□ 0.22
TGFBI-204ENST00000504411 RSF1Q96T23 1441 aaPredicted RBP16.4■□□□□ 0.22
TGFBI-204ENST00000504411 CECR2Q9BXF3 1484 aa16.38■□□□□ 0.21
TGFBI-204ENST00000504411 MROH2BQ7Z745 1585 aa16.34■□□□□ 0.21
TGFBI-204ENST00000504411 SMARCA4P51532 1647 aa16.34■□□□□ 0.21
TGFBI-204ENST00000504411 WIZO95785 1651 aa16.26■□□□□ 0.19
TGFBI-204ENST00000504411 PABPN1Q86U42 306 aaKnown RBP eCLIP16.23■□□□□ 0.194e-7■■□□□ 12.1
TGFBI-204ENST00000504411 PEG3Q9GZU2 1588 aa16.17■□□□□ 0.18
TGFBI-204ENST00000504411 TOP2AP11388 1531 aaKnown RBP16.14■□□□□ 0.17
TGFBI-204ENST00000504411 SMARCA2P51531 1590 aa16.05■□□□□ 0.16
TGFBI-204ENST00000504411 EIF4G1Q04637 1599 aaKnown RBP16.03■□□□□ 0.16
TGFBI-204ENST00000504411 ATAD2BQ9ULI0 1458 aa15.97■□□□□ 0.15
TGFBI-204ENST00000504411 HMGXB3Q12766 1538 aa15.92■□□□□ 0.14
TGFBI-204ENST00000504411 BAZ1BQ9UIG0 1483 aaKnown RBP15.91■□□□□ 0.14
TGFBI-204ENST00000504411 CCDC88BA6NC98 1476 aa15.87■□□□□ 0.13
TGFBI-204ENST00000504411 CHIC1Q5VXU3 224 aa15.87■□□□□ 0.13
TGFBI-204ENST00000504411 NCAPD3P42695 1498 aa15.84■□□□□ 0.13
TGFBI-204ENST00000504411 CC2D2AQ9P2K1 1620 aa15.78■□□□□ 0.12
TGFBI-204ENST00000504411 PRDM2Q13029 1718 aa15.68■□□□□ 0.1
TGFBI-204ENST00000504411 TRIM41Q8WV44 630 aa15.56■□□□□ 0.08
TGFBI-204ENST00000504411 ABCC8Q09428 1581 aa15.56■□□□□ 0.08
TGFBI-204ENST00000504411 CFTRP13569 1480 aa15.51■□□□□ 0.07
TGFBI-204ENST00000504411 WRNQ14191 1432 aaPredicted RBP eCLIP15.46■□□□□ 0.07
TGFBI-204ENST00000504411 BIVM-ERCC5R4GMW8 1640 aa15.46■□□□□ 0.06
TGFBI-204ENST00000504411 SYNJ1O43426 1573 aa15.45■□□□□ 0.06
TGFBI-204ENST00000504411 TOP2BQ02880 1626 aa15.42■□□□□ 0.06
TGFBI-204ENST00000504411 CADPSQ9ULU8 1353 aa15.39■□□□□ 0.05
TGFBI-204ENST00000504411 LAMC3Q9Y6N6 1575 aa15.37■□□□□ 0.05
TGFBI-204ENST00000504411 EEA1Q15075 1411 aa15.34■□□□□ 0.05
TGFBI-204ENST00000504411 CUX1P39880 1505 aa15.3■□□□□ 0.04
TGFBI-204ENST00000504411 FANCD2Q9BXW9 1451 aa15.26■□□□□ 0.03
TGFBI-204ENST00000504411 NESP48681 1621 aa15.22■□□□□ 0.03
TGFBI-204ENST00000504411 SOGA1O94964 1423 aa15.22■□□□□ 0.03
TGFBI-204ENST00000504411 DNMBPQ6XZF7 1577 aa15.22■□□□□ 0.03
TGFBI-204ENST00000504411 KIF21AQ7Z4S6 1674 aa15.2■□□□□ 0.02
TGFBI-204ENST00000504411 FAM9AQ8IZU1 332 aaPredicted RBP15.2■□□□□ 0.02
TGFBI-204ENST00000504411 CEP164Q9UPV0 1460 aa15.2■□□□□ 0.02
TGFBI-204ENST00000504411 KIF21BO75037 1637 aa15.19■□□□□ 0.02
TGFBI-204ENST00000504411 LOC105371045A0A1W2PR82 267 aa15.17■□□□□ 0.02
TGFBI-204ENST00000504411 PDS5BQ9NTI5 1447 aa15.17■□□□□ 0.02
TGFBI-204ENST00000504411 RUSC2Q8N2Y8 1516 aa15.15■□□□□ 0.02
TGFBI-204ENST00000504411 TOPBP1Q92547 1522 aa15.12■□□□□ 0.01
TGFBI-204ENST00000504411 FGD5Q6ZNL6 1462 aa15.12■□□□□ 0.01
TGFBI-204ENST00000504411 GOLGA3Q08378 1498 aa15.1■□□□□ 0.01
TGFBI-204ENST00000504411 CSRNP3Q8WYN3 585 aa15.09■□□□□ 0.01
TGFBI-204ENST00000504411 DNAJC5BQ9UF47 199 aa15.09■□□□□ 0.01
TGFBI-204ENST00000504411 WDR97A6NE52 1622 aa15.08■□□□□ 0
TGFBI-204ENST00000504411 KIF27Q86VH2 1401 aa15.08■□□□□ 0
TGFBI-204ENST00000504411 URB2Q14146 1524 aaKnown RBP15.07■□□□□ 0
TGFBI-204ENST00000504411 ERICH3Q5RHP9 1530 aa15.06■□□□□ 0
TGFBI-204ENST00000504411 POLA1P09884 1462 aaPredicted RBP15.04■□□□□ -0
TGFBI-204ENST00000504411 TNIKQ9UKE5 1360 aa15.02■□□□□ -0
TGFBI-204ENST00000504411 ABCA10Q8WWZ4 1543 aa15.02□□□□□ -0.01
TGFBI-204ENST00000504411 CUX2O14529 1486 aa15.01□□□□□ -0.01
TGFBI-204ENST00000504411 MRC2Q9UBG0 1479 aa15.01□□□□□ -0.01
TGFBI-204ENST00000504411 PRXQ9BXM0 1461 aa14.99□□□□□ -0.01
TGFBI-204ENST00000504411 CUL7Q14999 1698 aa14.96□□□□□ -0.01
TGFBI-204ENST00000504411 WDR62O43379 1518 aa14.96□□□□□ -0.02
TGFBI-204ENST00000504411 ABCA5Q8WWZ7 1642 aa14.95□□□□□ -0.02
TGFBI-204ENST00000504411 RAPGEF2Q9Y4G8 1499 aa14.95□□□□□ -0.02
TGFBI-204ENST00000504411 CEP162Q5TB80 1403 aa14.94□□□□□ -0.02
TGFBI-204ENST00000504411 TARBP1Q13395 1621 aaKnown RBP14.94□□□□□ -0.02
TGFBI-204ENST00000504411 RAD54L2Q9Y4B4 1467 aa14.93□□□□□ -0.02
TGFBI-204ENST00000504411 THOC2Q8NI27 1593 aaKnown RBP14.93□□□□□ -0.02
TGFBI-204ENST00000504411 EHMT2Q96KQ7 1210 aa14.92□□□□□ -0.02
TGFBI-204ENST00000504411 ERCC6Q03468 1493 aa14.89□□□□□ -0.03
TGFBI-204ENST00000504411 PBRM1Q86U86 1689 aa14.88□□□□□ -0.03
TGFBI-204ENST00000504411 UBTFP17480 764 aaKnown RBP14.88□□□□□ -0.03
TGFBI-204ENST00000504411 IGF1RP08069 1367 aa14.86□□□□□ -0.03
TGFBI-204ENST00000504411 CTTNBP2Q8WZ74 1663 aa14.84□□□□□ -0.03
TGFBI-204ENST00000504411 IFT140Q96RY7 1462 aa14.83□□□□□ -0.03
TGFBI-204ENST00000504411 CARMIL1Q5VZK9 1371 aa14.82□□□□□ -0.04
TGFBI-204ENST00000504411 CLIP1P30622 1438 aa14.82□□□□□ -0.04
TGFBI-204ENST00000504411 GAPVD1Q14C86 1478 aa14.82□□□□□ -0.04
TGFBI-204ENST00000504411 ADAMTS12P58397 1594 aa14.75□□□□□ -0.05
TGFBI-204ENST00000504411 EIF4G3O43432 1585 aaKnown RBP14.74□□□□□ -0.05
TGFBI-204ENST00000504411 TDRD9Q8NDG6 1382 aaKnown RBP14.73□□□□□ -0.05
TGFBI-204ENST00000504411 GRIN2BQ13224 1484 aa14.72□□□□□ -0.05
TGFBI-204ENST00000504411 VPS8Q8N3P4 1428 aa14.72□□□□□ -0.05
TGFBI-204ENST00000504411 EFCAB5A4FU69 1503 aa14.68□□□□□ -0.06
TGFBI-204ENST00000504411 ARAP1Q96P48 1450 aa14.68□□□□□ -0.06
TGFBI-204ENST00000504411 FHAD1B1AJZ9 1412 aa14.67□□□□□ -0.06
TGFBI-204ENST00000504411 ZNF608Q9ULD9 1512 aaPredicted RBP14.66□□□□□ -0.06
TGFBI-204ENST00000504411 AQRO60306 1485 aaKnown RBP eCLIP14.66□□□□□ -0.067e-9■■■■■ 34.8
TGFBI-204ENST00000504411 ARHGAP35Q9NRY4 1499 aa14.65□□□□□ -0.06
TGFBI-204ENST00000504411 TRIM26Q12899 539 aaPredicted RBP14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms