Protein–RNA interactions for Protein: P26368

U2AF2, Splicing factor U2AF 65 kDa subunit, humanhuman

Known RBP eCLIP

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF2P26368 LARP4-214ENST00000548993 790 ntTSL 517.93■□□□□ 0.467e-17■■■■□ 26.4
U2AF2P26368 LARP4-217ENST00000551886 586 ntTSL 217.74■□□□□ 0.437e-17■■■■□ 26.4
U2AF2P26368 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC17.39■□□□□ 0.377e-17■■■■□ 26.4
U2AF2P26368 LARP4-220ENST00000615080 856 ntTSL 5 BASIC16.96■□□□□ 0.317e-17■■■■□ 26.4
U2AF2P26368 LARP4-201ENST00000293618 6296 ntTSL 1 (best) BASIC15.67■□□□□ 0.17e-17■■■■□ 26.4
U2AF2P26368 CUL2-210ENST00000626172 4115 ntTSL 5 BASIC14.65□□□□□ -0.061e-8■■■■□ 26.4
U2AF2P26368 LARP4-207ENST00000518561 1578 ntTSL 1 (best) BASIC14.14□□□□□ -0.157e-17■■■■□ 26.4
U2AF2P26368 LARP4-206ENST00000518444 2853 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.227e-17■■■■□ 26.4
U2AF2P26368 CUL2-203ENST00000374749 4208 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.321e-8■■■■□ 26.4
U2AF2P26368 LARP4-205ENST00000517559 559 ntTSL 412.56□□□□□ -0.47e-17■■■■□ 26.4
U2AF2P26368 TMEM126B-209ENST00000531477 820 ntTSL 312.37□□□□□ -0.438e-9■■■■□ 26.4
U2AF2P26368 CUL2-202ENST00000374748 4312 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.431e-8■■■■□ 26.4
U2AF2P26368 LARP4-204ENST00000429001 4000 ntTSL 5 BASIC11.8□□□□□ -0.527e-17■■■■□ 26.4
U2AF2P26368 CUL2-204ENST00000374751 4233 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.631e-8■■■■□ 26.4
U2AF2P26368 TMEM126B-201ENST00000358867 989 ntAPPRIS P3 TSL 2 BASIC8.95□□□□□ -0.988e-9■■■■□ 26.4
U2AF2P26368 LARP4-218ENST00000552445 722 ntTSL 38.74□□□□□ -1.017e-17■■■■□ 26.4
U2AF2P26368 TMEM126B-206ENST00000530783 675 ntTSL 58.61□□□□□ -1.038e-9■■■■□ 26.4
U2AF2P26368 TMEM126B-202ENST00000393375 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC8.57□□□□□ -1.048e-9■■■■□ 26.4
U2AF2P26368 TMEM126B-211ENST00000534341 1273 ntTSL 2 BASIC7.34□□□□□ -1.238e-9■■■■□ 26.4
U2AF2P26368 LARP4-216ENST00000550522 567 ntTSL 46.75□□□□□ -1.337e-17■■■■□ 26.4
U2AF2P26368 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.47e-17■■■■□ 26.4
U2AF2P26368 TMEM126B-203ENST00000526822 853 ntTSL 26.29□□□□□ -1.48e-9■■■■□ 26.4
U2AF2P26368 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC5.45□□□□□ -1.547e-17■■■■□ 26.4
U2AF2P26368 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC5.2□□□□□ -1.581e-8■■■■□ 26.4
U2AF2P26368 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.9□□□□□ -1.631e-8■■■■□ 26.4
U2AF2P26368 ADNP2-203ENST00000560561 647 ntTSL 34.19□□□□□ -1.741e-8■■■■□ 26.4
U2AF2P26368 SMCHD1-202ENST00000577300 506 ntTSL 33□□□□□ -1.931e-8■■■■□ 26.4
U2AF2P26368 TMEM126B-205ENST00000529197 1149 ntTSL 1 (best)2□□□□□ -2.098e-9■■■■□ 26.4
U2AF2P26368 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.7□□□□□ -2.141e-8■■■■□ 26.4
U2AF2P26368 TMEM126B-208ENST00000531274 376 ntTSL 31.64□□□□□ -2.158e-9■■■■□ 26.4
U2AF2P26368 LARP4-215ENST00000550260 583 ntTSL 30.83□□□□□ -2.287e-17■■■■□ 26.4
U2AF2P26368 THOC2-209ENST00000448128 1365 ntTSL 56.33□□□□□ -1.42e-7■■■■□ 26.4
U2AF2P26368 THOC2-219ENST00000497887 768 ntTSL 36.06□□□□□ -1.442e-7■■■■□ 26.4
U2AF2P26368 THOC2-208ENST00000441692 4364 ntTSL 54.68□□□□□ -1.662e-7■■■■□ 26.4
U2AF2P26368 PSMD12-205ENST00000579365 560 ntTSL 422.79■■□□□ 1.241e-9■■■■□ 26.4
U2AF2P26368 PSMD12-207ENST00000584008 1752 ntTSL 1 (best)21.28■■□□□ 11e-9■■■■□ 26.4
U2AF2P26368 PSMD12-208ENST00000584289 1090 ntTSL 1 (best)20.72■□□□□ 0.911e-9■■■■□ 26.4
U2AF2P26368 PSMD12-206ENST00000581618 613 ntTSL 420.47■□□□□ 0.871e-9■■■■□ 26.4
U2AF2P26368 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC19.86■□□□□ 0.771e-9■■■■□ 26.4
U2AF2P26368 PSMD12-204ENST00000578015 448 ntTSL 217.97■□□□□ 0.471e-9■■■■□ 26.4
U2AF2P26368 IGF1R-211ENST00000560144 525 ntTSL 310.22□□□□□ -0.776e-7■■■■□ 26.4
U2AF2P26368 HGD-201ENST00000283871 2005 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.799e-11■■■■□ 26.4
U2AF2P26368 CASC4-204ENST00000557945 1386 ntTSL 1 (best)24.21■■□□□ 1.474e-6■■■■□ 26.4
U2AF2P26368 POMT1-206ENST00000415075 847 ntTSL 522.01■■□□□ 1.119e-7■■■■□ 26.4
U2AF2P26368 POMT1-210ENST00000441334 1168 ntTSL 521.28■■□□□ 19e-7■■■■□ 26.4
U2AF2P26368 CASC4-209ENST00000559222 742 ntTSL 321.13■□□□□ 0.974e-6■■■■□ 26.4
U2AF2P26368 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.919e-7■■■■□ 26.4
U2AF2P26368 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC18.52■□□□□ 0.559e-7■■■■□ 26.4
U2AF2P26368 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.379e-7■■■■□ 26.4
U2AF2P26368 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC16.64■□□□□ 0.259e-7■■■■□ 26.4
U2AF2P26368 POMT1-203ENST00000372228 3123 ntTSL 1 (best) BASIC15.68■□□□□ 0.19e-7■■■■□ 26.4
U2AF2P26368 CASC4-201ENST00000299957 3962 ntAPPRIS P4 TSL 1 (best) BASIC15.57■□□□□ 0.084e-6■■■■□ 26.4
U2AF2P26368 CASC4-202ENST00000345795 3764 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.014e-6■■■■□ 26.4
U2AF2P26368 POMT1-212ENST00000462375 1001 ntTSL 515.05■□□□□ -09e-7■■■■□ 26.4
U2AF2P26368 CASC4-205ENST00000558735 427 ntTSL 312.75□□□□□ -0.374e-6■■■■□ 26.4
U2AF2P26368 CASC4-207ENST00000559037 680 ntTSL 35.43□□□□□ -1.544e-6■■■■□ 26.4
U2AF2P26368 PIM1-201ENST00000373509 2650 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.026e-9■■■■□ 26.4
U2AF2P26368 RAPGEF6-207ENST00000507093 5742 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.163e-8■■■■□ 26.3
U2AF2P26368 RAPGEF6-208ENST00000509018 8357 ntAPPRIS P3 TSL 1 (best) BASIC8.25□□□□□ -1.093e-8■■■■□ 26.3
U2AF2P26368 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.713e-8■■■■□ 26.3
U2AF2P26368 TUBGCP3-203ENST00000462580 915 ntTSL 37.11□□□□□ -1.275e-7■■■■□ 26.3
U2AF2P26368 TBC1D4-206ENST00000488955 336 ntTSL 59.28□□□□□ -0.927e-8■■■■□ 26.3
U2AF2P26368 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC7□□□□□ -1.296e-9■■■■□ 26.3
U2AF2P26368 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.86e-9■■■■□ 26.3
U2AF2P26368 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC25.13■■□□□ 1.613e-21■■■■□ 26.3
U2AF2P26368 C6orf136-204ENST00000446773 1496 ntTSL 1 (best)22.22■■□□□ 1.153e-21■■■■□ 26.3
U2AF2P26368 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.743e-21■■■■□ 26.3
U2AF2P26368 C6orf136-206ENST00000463794 445 ntTSL 318.56■□□□□ 0.563e-21■■■■□ 26.3
U2AF2P26368 C6orf136-210ENST00000484551 613 ntTSL 318.12■□□□□ 0.493e-21■■■■□ 26.3
U2AF2P26368 C6orf136-212ENST00000488383 1337 ntTSL 517.64■□□□□ 0.413e-21■■■■□ 26.3
U2AF2P26368 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC16.85■□□□□ 0.292e-6■■■■□ 26.3
U2AF2P26368 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC15.78■□□□□ 0.123e-21■■■■□ 26.3
U2AF2P26368 SLC25A26-205ENST00000483224 1840 ntTSL 513.45□□□□□ -0.262e-6■■■■□ 26.3
U2AF2P26368 CLIP1-210ENST00000538120 2472 ntTSL 312.41□□□□□ -0.422e-6■■■■□ 26.3
U2AF2P26368 OGFOD1-207ENST00000566157 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.442e-6■■■■□ 26.3
U2AF2P26368 CLIP1-214ENST00000540539 2592 ntTSL 2 BASIC11.75□□□□□ -0.532e-6■■■■□ 26.3
U2AF2P26368 OGFOD1-201ENST00000336111 2415 ntTSL 211.24□□□□□ -0.612e-6■■■■□ 26.3
U2AF2P26368 SLC25A26-203ENST00000413054 1096 ntTSL 5 BASIC10.49□□□□□ -0.732e-6■■■■□ 26.3
U2AF2P26368 SLC25A26-206ENST00000484768 375 ntTSL 39.35□□□□□ -0.912e-6■■■■□ 26.3
U2AF2P26368 CLIP1-207ENST00000536634 929 ntTSL 35.4□□□□□ -1.542e-6■■■■□ 26.3
U2AF2P26368 DDX47-205ENST00000535722 586 ntTSL 25□□□□□ -1.612e-6■■■■□ 26.3
U2AF2P26368 HOMER1-203ENST00000460741 755 ntTSL 24.96□□□□□ -1.622e-6■■■■□ 26.3
U2AF2P26368 C5-202ENST00000460578 521 ntTSL 53.11□□□□□ -1.912e-7■■■■□ 26.3
U2AF2P26368 WASHC4-213ENST00000552203 359 ntTSL 35.08□□□□□ -1.69e-9■■■■□ 26.3
U2AF2P26368 WASHC4-210ENST00000550786 633 ntTSL 31.73□□□□□ -2.139e-9■■■■□ 26.3
U2AF2P26368 URI1-206ENST00000574110 2495 ntTSL 1 (best)28.53■■■□□ 2.167e-7■■■■□ 26.3
U2AF2P26368 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.117e-7■■■■□ 26.3
U2AF2P26368 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.397e-7■■■■□ 26.3
U2AF2P26368 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC18.64■□□□□ 0.572e-20■■■■□ 26.3
U2AF2P26368 ASXL1-208ENST00000555343 1034 ntTSL 5 BASIC7.55□□□□□ -1.22e-20■■■■□ 26.3
U2AF2P26368 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC5.63□□□□□ -1.512e-20■■■■□ 26.3
U2AF2P26368 ASXL1-205ENST00000497249 296 ntTSL 52.97□□□□□ -1.932e-20■■■■□ 26.3
U2AF2P26368 RETREG3-202ENST00000585726 522 ntTSL 424.26■■□□□ 1.478e-7■■■■□ 26.3
U2AF2P26368 RETREG3-205ENST00000586870 1632 ntTSL 221.29■■□□□ 18e-7■■■■□ 26.3
U2AF2P26368 RETREG3-212ENST00000593251 565 ntTSL 419.09■□□□□ 0.658e-7■■■■□ 26.3
U2AF2P26368 RETREG3-206ENST00000588423 559 ntTSL 418.08■□□□□ 0.488e-7■■■■□ 26.3
U2AF2P26368 RETREG3-208ENST00000589797 4149 ntTSL 216.38■□□□□ 0.218e-7■■■■□ 26.3
U2AF2P26368 RETREG3-201ENST00000309428 3759 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.018e-7■■■■□ 26.3
U2AF2P26368 RETREG3-203ENST00000585894 1733 ntTSL 1 (best) BASIC14.29□□□□□ -0.128e-7■■■■□ 26.3
U2AF2P26368 RETREG3-211ENST00000591547 564 ntTSL 410.73□□□□□ -0.698e-7■■■■□ 26.3
Retrieved 100 of 36,523 protein–RNA pairs in 501.5 ms