RNA–Protein interactions for RNA: ENST00000578015.1

PSMD12-204, Transcript of proteasome 26S subunit, non-ATPase 12, humanhuman

TSL 2

Gene PSMD12, Length 448 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD12-204ENST00000578015 NISCHQ9Y2I1 1504 aa42.01■■■■■ 4.32
PSMD12-204ENST00000578015 ABCC9O60706 1549 aa38.17■■■■□ 3.7
PSMD12-204ENST00000578015 CCDC180Q9P1Z9 1646 aa37.87■■■■□ 3.65
PSMD12-204ENST00000578015 RB1CC1Q8TDY2 1594 aa36.26■■■■□ 3.39
PSMD12-204ENST00000578015 DNAJC5BQ9UF47 199 aa36.1■■■■□ 3.37
PSMD12-204ENST00000578015 NACADO15069 1562 aa35.93■■■■□ 3.34
PSMD12-204ENST00000578015 DCAF8L2P0C7V8 631 aa35.65■■■■□ 3.3
PSMD12-204ENST00000578015 PABPN1Q86U42 306 aaKnown RBP eCLIP35.49■■■■□ 3.27
PSMD12-204ENST00000578015 MYO15BQ96JP2 1530 aa35.36■■■■□ 3.25
PSMD12-204ENST00000578015 UNC13AQ9UPW8 1703 aa35.28■■■■□ 3.24
PSMD12-204ENST00000578015 BICRAQ9NZM4 1560 aa35.1■■■■□ 3.21
PSMD12-204ENST00000578015 SHROOM4Q9ULL8 1493 aa34.79■■■■□ 3.16
PSMD12-204ENST00000578015 DCAF1Q9Y4B6 1507 aa34.74■■■■□ 3.15
PSMD12-204ENST00000578015 ZCCHC6Q5VYS8 1495 aaKnown RBP34.71■■■■□ 3.15
PSMD12-204ENST00000578015 CECR2Q9BXF3 1484 aa34.48■■■■□ 3.11
PSMD12-204ENST00000578015 CC2D2AQ9P2K1 1620 aa34.47■■■■□ 3.11
PSMD12-204ENST00000578015 SCRIBQ14160 1630 aa34.4■■■■□ 3.1
PSMD12-204ENST00000578015 EIF4G1Q04637 1599 aaKnown RBP34.32■■■■□ 3.09
PSMD12-204ENST00000578015 DNAJC5Q9H3Z4 198 aa33.56■■■□□ 2.96
PSMD12-204ENST00000578015 NCAPD3P42695 1498 aa33.18■■■□□ 2.9
PSMD12-204ENST00000578015 CUX2O14529 1486 aa33.16■■■□□ 2.9
PSMD12-204ENST00000578015 ERCC6Q03468 1493 aa33.07■■■□□ 2.88
PSMD12-204ENST00000578015 ATAD2BQ9ULI0 1458 aa32.98■■■□□ 2.87
PSMD12-204ENST00000578015 SMARCA2P51531 1590 aa32.92■■■□□ 2.86
PSMD12-204ENST00000578015 HMGXB3Q12766 1538 aa32.87■■■□□ 2.85
PSMD12-204ENST00000578015 SMARCA4P51532 1647 aa32.82■■■□□ 2.84
PSMD12-204ENST00000578015 BAZ1AQ9NRL2 1556 aaPredicted RBP32.67■■■□□ 2.82
PSMD12-204ENST00000578015 BAZ1BQ9UIG0 1483 aaKnown RBP32.66■■■□□ 2.82
PSMD12-204ENST00000578015 NESP48681 1621 aa32.65■■■□□ 2.82
PSMD12-204ENST00000578015 PEG3Q9GZU2 1588 aa32.54■■■□□ 2.8
PSMD12-204ENST00000578015 LAMC3Q9Y6N6 1575 aa32.48■■■□□ 2.79
PSMD12-204ENST00000578015 THOC2Q8NI27 1593 aaKnown RBP32.41■■■□□ 2.78
PSMD12-204ENST00000578015 PDS5BQ9NTI5 1447 aa32.36■■■□□ 2.77
PSMD12-204ENST00000578015 MROH2BQ7Z745 1585 aa32.31■■■□□ 2.76
PSMD12-204ENST00000578015 KIF21AQ7Z4S6 1674 aa32.2■■■□□ 2.74
PSMD12-204ENST00000578015 CADPSQ9ULU8 1353 aa32.16■■■□□ 2.74
PSMD12-204ENST00000578015 MRC2Q9UBG0 1479 aa32.03■■■□□ 2.72
PSMD12-204ENST00000578015 WDR62O43379 1518 aa31.95■■■□□ 2.7
PSMD12-204ENST00000578015 WIZO95785 1651 aa31.87■■■□□ 2.69
PSMD12-204ENST00000578015 TRIM41Q8WV44 630 aa31.87■■■□□ 2.69
PSMD12-204ENST00000578015 CEP164Q9UPV0 1460 aa31.84■■■□□ 2.69
PSMD12-204ENST00000578015 FANCD2Q9BXW9 1451 aa31.75■■■□□ 2.67
PSMD12-204ENST00000578015 CFTRP13569 1480 aa31.69■■■□□ 2.66
PSMD12-204ENST00000578015 OSCARQ8IYS5 282 aa31.62■■■□□ 2.65
PSMD12-204ENST00000578015 RSF1Q96T23 1441 aaPredicted RBP31.55■■■□□ 2.64
PSMD12-204ENST00000578015 TOP2AP11388 1531 aaKnown RBP31.52■■■□□ 2.64
PSMD12-204ENST00000578015 URB2Q14146 1524 aaKnown RBP31.46■■■□□ 2.63
PSMD12-204ENST00000578015 PRDM2Q13029 1718 aa31.27■■■□□ 2.6
PSMD12-204ENST00000578015 IFT140Q96RY7 1462 aa31.24■■■□□ 2.59
PSMD12-204ENST00000578015 CCDC88BA6NC98 1476 aa31.15■■■□□ 2.58
PSMD12-204ENST00000578015 ABCC8Q09428 1581 aa31.13■■■□□ 2.57
PSMD12-204ENST00000578015 ZNF608Q9ULD9 1512 aaPredicted RBP31.12■■■□□ 2.57
PSMD12-204ENST00000578015 RIMBP3CA6NJZ7 1639 aa31.11■■■□□ 2.57
PSMD12-204ENST00000578015 RIMBP3BA6NNM3 1639 aa31.11■■■□□ 2.57
PSMD12-204ENST00000578015 RIMBP3Q9UFD9 1639 aa31.11■■■□□ 2.57
PSMD12-204ENST00000578015 TOPBP1Q92547 1522 aa31.09■■■□□ 2.57
PSMD12-204ENST00000578015 ARHGEF11O15085 1522 aa31.01■■■□□ 2.55
PSMD12-204ENST00000578015 DNMBPQ6XZF7 1577 aa30.96■■■□□ 2.55
PSMD12-204ENST00000578015 EIF4G3O43432 1585 aaKnown RBP30.94■■■□□ 2.54
PSMD12-204ENST00000578015 CYB5RLQ6IPT4 315 aa30.85■■■□□ 2.53
PSMD12-204ENST00000578015 AQRO60306 1485 aaKnown RBP eCLIP30.82■■■□□ 2.533e-8■■■■■ 30.9
PSMD12-204ENST00000578015 TARBP1Q13395 1621 aaKnown RBP30.81■■■□□ 2.52
PSMD12-204ENST00000578015 FBLN2P98095 1184 aa30.77■■■□□ 2.52
PSMD12-204ENST00000578015 CHD1O14646 1710 aa30.76■■■□□ 2.51
PSMD12-204ENST00000578015 POLA1P09884 1462 aaPredicted RBP30.75■■■□□ 2.51
PSMD12-204ENST00000578015 SOGA1O94964 1423 aa30.65■■■□□ 2.5
PSMD12-204ENST00000578015 ARAP1Q96P48 1450 aa30.65■■■□□ 2.5
PSMD12-204ENST00000578015 TRHP20396 242 aaPredicted RBP30.65■■■□□ 2.5
PSMD12-204ENST00000578015 RAD54L2Q9Y4B4 1467 aa30.6■■■□□ 2.49
PSMD12-204ENST00000578015 WDR97A6NE52 1622 aa30.59■■■□□ 2.49
PSMD12-204ENST00000578015 TDRD9Q8NDG6 1382 aaKnown RBP30.59■■■□□ 2.49
PSMD12-204ENST00000578015 CHMP7Q8WUX9 453 aaPredicted RBP30.52■■■□□ 2.48
PSMD12-204ENST00000578015 SNAPC4Q5SXM2 1469 aa30.5■■■□□ 2.47
PSMD12-204ENST00000578015 FGD5Q6ZNL6 1462 aa30.5■■■□□ 2.47
PSMD12-204ENST00000578015 MAGI1Q96QZ7 1491 aaPredicted RBP30.49■■■□□ 2.47
PSMD12-204ENST00000578015 SYNJ1O43426 1573 aa30.46■■■□□ 2.47
PSMD12-204ENST00000578015 CLASP1Q7Z460 1538 aa30.44■■■□□ 2.46
PSMD12-204ENST00000578015 GRIN2BQ13224 1484 aa30.44■■■□□ 2.46
PSMD12-204ENST00000578015 CUX1P39880 1505 aa30.38■■■□□ 2.45
PSMD12-204ENST00000578015 SYNJ2O15056 1496 aa30.38■■■□□ 2.45
PSMD12-204ENST00000578015 GAPVD1Q14C86 1478 aa30.26■■■□□ 2.44
PSMD12-204ENST00000578015 PBRM1Q86U86 1689 aa30.18■■■□□ 2.42
PSMD12-204ENST00000578015 ABCA10Q8WWZ4 1543 aa30.17■■■□□ 2.42
PSMD12-204ENST00000578015 ABCA5Q8WWZ7 1642 aa30.11■■■□□ 2.41
PSMD12-204ENST00000578015 AEBP2Q6ZN18 517 aaPredicted RBP30.09■■■□□ 2.41
PSMD12-204ENST00000578015 WRNQ14191 1432 aaPredicted RBP eCLIP30.03■■■□□ 2.4
PSMD12-204ENST00000578015 GRIN2AQ12879 1464 aa30.01■■■□□ 2.4
PSMD12-204ENST00000578015 NUP160Q12769 1436 aa29.93■■■□□ 2.38
PSMD12-204ENST00000578015 ADAMTS12P58397 1594 aa29.9■■■□□ 2.38
PSMD12-204ENST00000578015 FHAD1B1AJZ9 1412 aa29.89■■■□□ 2.38
PSMD12-204ENST00000578015 SUPT5HO00267 1087 aaKnown RBP29.88■■■□□ 2.37
PSMD12-204ENST00000578015 CEP170Q5SW79 1584 aa29.87■■■□□ 2.37
PSMD12-204ENST00000578015 ERCC6L2Q5T890 1561 aa29.86■■■□□ 2.37
PSMD12-204ENST00000578015 TOP2BQ02880 1626 aa29.84■■■□□ 2.37
PSMD12-204ENST00000578015 BIVM-ERCC5R4GMW8 1640 aa29.82■■■□□ 2.36
PSMD12-204ENST00000578015 SHROOM2Q13796 1616 aa29.81■■■□□ 2.36
PSMD12-204ENST00000578015 ERICH3Q5RHP9 1530 aa29.81■■■□□ 2.36
PSMD12-204ENST00000578015 JPH4Q96JJ6 628 aa29.68■■■□□ 2.34
PSMD12-204ENST00000578015 PRG4Q92954 1404 aaPredicted RBP29.68■■■□□ 2.34
PSMD12-204ENST00000578015 NPM1P06748 294 aaKnown RBP eCLIP29.59■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 1261.9 ms