RNA–Protein interactions for RNA: ENST00000518561.5

LARP4-207, Transcript of La ribonucleoprotein domain family member 4, humanhuman

TSL 1 (best) BASIC

Gene LARP4, Length 1,578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LARP4-207ENST00000518561 NISCHQ9Y2I1 1504 aa31.44■■■□□ 2.62
LARP4-207ENST00000518561 CCDC180Q9P1Z9 1646 aa28.11■■■□□ 2.09
LARP4-207ENST00000518561 ABCC9O60706 1549 aa27.78■■■□□ 2.04
LARP4-207ENST00000518561 RB1CC1Q8TDY2 1594 aa26.61■■□□□ 1.85
LARP4-207ENST00000518561 NACADO15069 1562 aa26.5■■□□□ 1.83
LARP4-207ENST00000518561 DCAF8L2P0C7V8 631 aa26.38■■□□□ 1.81
LARP4-207ENST00000518561 MYO15BQ96JP2 1530 aa26.25■■□□□ 1.79
LARP4-207ENST00000518561 ZCCHC6Q5VYS8 1495 aaKnown RBP26.11■■□□□ 1.77
LARP4-207ENST00000518561 UNC13AQ9UPW8 1703 aa26.04■■□□□ 1.76
LARP4-207ENST00000518561 DCAF1Q9Y4B6 1507 aa26.01■■□□□ 1.75
LARP4-207ENST00000518561 PABPN1Q86U42 306 aaKnown RBP eCLIP25.91■■□□□ 1.74
LARP4-207ENST00000518561 DNAJC5BQ9UF47 199 aa25.82■■□□□ 1.72
LARP4-207ENST00000518561 BICRAQ9NZM4 1560 aa25.82■■□□□ 1.72
LARP4-207ENST00000518561 SCRIBQ14160 1630 aa25.6■■□□□ 1.69
LARP4-207ENST00000518561 SHROOM4Q9ULL8 1493 aa25.51■■□□□ 1.67
LARP4-207ENST00000518561 EIF4G1Q04637 1599 aaKnown RBP25.16■■□□□ 1.62
LARP4-207ENST00000518561 CC2D2AQ9P2K1 1620 aa25.14■■□□□ 1.62
LARP4-207ENST00000518561 CECR2Q9BXF3 1484 aa25.01■■□□□ 1.59
LARP4-207ENST00000518561 SMARCA4P51532 1647 aa24.47■■□□□ 1.51
LARP4-207ENST00000518561 NCAPD3P42695 1498 aa24.46■■□□□ 1.51
LARP4-207ENST00000518561 ATAD2BQ9ULI0 1458 aa24.41■■□□□ 1.5
LARP4-207ENST00000518561 BAZ1AQ9NRL2 1556 aaPredicted RBP24.39■■□□□ 1.5
LARP4-207ENST00000518561 SMARCA2P51531 1590 aa24.37■■□□□ 1.49
LARP4-207ENST00000518561 HMGXB3Q12766 1538 aa24.3■■□□□ 1.48
LARP4-207ENST00000518561 PEG3Q9GZU2 1588 aa24.24■■□□□ 1.47
LARP4-207ENST00000518561 MROH2BQ7Z745 1585 aa24.22■■□□□ 1.47
LARP4-207ENST00000518561 BAZ1BQ9UIG0 1483 aaKnown RBP24.18■■□□□ 1.46
LARP4-207ENST00000518561 ERCC6Q03468 1493 aa23.97■■□□□ 1.43
LARP4-207ENST00000518561 NESP48681 1621 aa23.96■■□□□ 1.43
LARP4-207ENST00000518561 WIZO95785 1651 aa23.95■■□□□ 1.42
LARP4-207ENST00000518561 LAMC3Q9Y6N6 1575 aa23.87■■□□□ 1.41
LARP4-207ENST00000518561 CUX2O14529 1486 aa23.85■■□□□ 1.41
LARP4-207ENST00000518561 RSF1Q96T23 1441 aaPredicted RBP23.82■■□□□ 1.4
LARP4-207ENST00000518561 CADPSQ9ULU8 1353 aa23.72■■□□□ 1.39
LARP4-207ENST00000518561 PDS5BQ9NTI5 1447 aa23.7■■□□□ 1.38
LARP4-207ENST00000518561 KIF21AQ7Z4S6 1674 aa23.69■■□□□ 1.38
LARP4-207ENST00000518561 THOC2Q8NI27 1593 aaKnown RBP23.67■■□□□ 1.38
LARP4-207ENST00000518561 TOP2AP11388 1531 aaKnown RBP23.67■■□□□ 1.38
LARP4-207ENST00000518561 DNAJC5Q9H3Z4 198 aa23.52■■□□□ 1.36
LARP4-207ENST00000518561 CFTRP13569 1480 aa23.51■■□□□ 1.35
LARP4-207ENST00000518561 MRC2Q9UBG0 1479 aa23.47■■□□□ 1.35
LARP4-207ENST00000518561 FANCD2Q9BXW9 1451 aa23.44■■□□□ 1.34
LARP4-207ENST00000518561 CEP164Q9UPV0 1460 aa23.43■■□□□ 1.34
LARP4-207ENST00000518561 WDR62O43379 1518 aa23.42■■□□□ 1.34
LARP4-207ENST00000518561 CCDC88BA6NC98 1476 aa23.39■■□□□ 1.34
LARP4-207ENST00000518561 PRDM2Q13029 1718 aa23.34■■□□□ 1.33
LARP4-207ENST00000518561 URB2Q14146 1524 aaKnown RBP23.23■■□□□ 1.31
LARP4-207ENST00000518561 TOPBP1Q92547 1522 aa23.03■■□□□ 1.28
LARP4-207ENST00000518561 ABCC8Q09428 1581 aa23.02■■□□□ 1.28
LARP4-207ENST00000518561 DNMBPQ6XZF7 1577 aa22.98■■□□□ 1.27
LARP4-207ENST00000518561 IFT140Q96RY7 1462 aa22.97■■□□□ 1.27
LARP4-207ENST00000518561 SUPT5HO00267 1087 aaKnown RBP22.96■■□□□ 1.27
LARP4-207ENST00000518561 ZNF608Q9ULD9 1512 aaPredicted RBP22.89■■□□□ 1.25
LARP4-207ENST00000518561 TARBP1Q13395 1621 aaKnown RBP22.82■■□□□ 1.24
LARP4-207ENST00000518561 OSCARQ8IYS5 282 aa22.81■■□□□ 1.24
LARP4-207ENST00000518561 POLA1P09884 1462 aaPredicted RBP22.81■■□□□ 1.24
LARP4-207ENST00000518561 EIF4G3O43432 1585 aaKnown RBP22.79■■□□□ 1.24
LARP4-207ENST00000518561 CUX1P39880 1505 aa22.73■■□□□ 1.23
LARP4-207ENST00000518561 AQRO60306 1485 aaKnown RBP eCLIP22.72■■□□□ 1.234e-8■■■■■ 32.5
LARP4-207ENST00000518561 SOGA1O94964 1423 aa22.71■■□□□ 1.23
LARP4-207ENST00000518561 RAD54L2Q9Y4B4 1467 aa22.71■■□□□ 1.23
LARP4-207ENST00000518561 FGD5Q6ZNL6 1462 aa22.71■■□□□ 1.23
LARP4-207ENST00000518561 WDR97A6NE52 1622 aa22.62■■□□□ 1.21
LARP4-207ENST00000518561 TDRD9Q8NDG6 1382 aaKnown RBP22.62■■□□□ 1.21
LARP4-207ENST00000518561 CHD1O14646 1710 aa22.59■■□□□ 1.21
LARP4-207ENST00000518561 TRIM41Q8WV44 630 aa22.56■■□□□ 1.2
LARP4-207ENST00000518561 FBLN2P98095 1184 aa22.5■■□□□ 1.19
LARP4-207ENST00000518561 SNAPC4Q5SXM2 1469 aa22.5■■□□□ 1.19
LARP4-207ENST00000518561 GRIN2BQ13224 1484 aa22.49■■□□□ 1.19
LARP4-207ENST00000518561 RIMBP3CA6NJZ7 1639 aa22.48■■□□□ 1.19
LARP4-207ENST00000518561 RIMBP3BA6NNM3 1639 aa22.48■■□□□ 1.19
LARP4-207ENST00000518561 RIMBP3Q9UFD9 1639 aa22.48■■□□□ 1.19
LARP4-207ENST00000518561 ABCA10Q8WWZ4 1543 aa22.48■■□□□ 1.19
LARP4-207ENST00000518561 BIVM-ERCC5R4GMW8 1640 aa22.47■■□□□ 1.19
LARP4-207ENST00000518561 MAGI1Q96QZ7 1491 aaPredicted RBP22.47■■□□□ 1.19
LARP4-207ENST00000518561 WRNQ14191 1432 aaPredicted RBP eCLIP22.47■■□□□ 1.19
LARP4-207ENST00000518561 TOP2BQ02880 1626 aa22.47■■□□□ 1.19
LARP4-207ENST00000518561 GAPVD1Q14C86 1478 aa22.45■■□□□ 1.18
LARP4-207ENST00000518561 SYNJ1O43426 1573 aa22.44■■□□□ 1.18
LARP4-207ENST00000518561 ARHGEF11O15085 1522 aa22.44■■□□□ 1.18
LARP4-207ENST00000518561 PBRM1Q86U86 1689 aa22.44■■□□□ 1.18
LARP4-207ENST00000518561 ABCA5Q8WWZ7 1642 aa22.42■■□□□ 1.18
LARP4-207ENST00000518561 CHMP7Q8WUX9 453 aaPredicted RBP22.4■■□□□ 1.18
LARP4-207ENST00000518561 SYNJ2O15056 1496 aa22.39■■□□□ 1.17
LARP4-207ENST00000518561 CLASP1Q7Z460 1538 aa22.32■■□□□ 1.16
LARP4-207ENST00000518561 CYB5RLQ6IPT4 315 aa22.25■■□□□ 1.15
LARP4-207ENST00000518561 ARAP1Q96P48 1450 aa22.23■■□□□ 1.15
LARP4-207ENST00000518561 ADAMTS12P58397 1594 aa22.22■■□□□ 1.15
LARP4-207ENST00000518561 ERICH3Q5RHP9 1530 aa22.21■■□□□ 1.15
LARP4-207ENST00000518561 GRIN2AQ12879 1464 aa22.2■■□□□ 1.14
LARP4-207ENST00000518561 FHAD1B1AJZ9 1412 aa22.18■■□□□ 1.14
LARP4-207ENST00000518561 NUP160Q12769 1436 aa22.12■■□□□ 1.13
LARP4-207ENST00000518561 CEP170Q5SW79 1584 aa22.11■■□□□ 1.13
LARP4-207ENST00000518561 KIF27Q86VH2 1401 aa22.03■■□□□ 1.12
LARP4-207ENST00000518561 SHROOM2Q13796 1616 aa22■■□□□ 1.11
LARP4-207ENST00000518561 IGF1RP08069 1367 aa21.99■■□□□ 1.11
LARP4-207ENST00000518561 ERCC6L2Q5T890 1561 aa21.98■■□□□ 1.11
LARP4-207ENST00000518561 CUL7Q14999 1698 aa21.95■■□□□ 1.1
LARP4-207ENST00000518561 RUSC2Q8N2Y8 1516 aa21.9■■□□□ 1.1
LARP4-207ENST00000518561 TRHP20396 242 aaPredicted RBP21.9■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms