RNA–Protein interactions for RNA: ENST00000535722.1

DDX47-205, Transcript of DEAD-box helicase 47, humanhuman

TSL 2

Gene DDX47, Length 586 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47-205ENST00000535722 AEBP2Q6ZN18 517 aaPredicted RBP22.26■■□□□ 1.15
DDX47-205ENST00000535722 CHIC1Q5VXU3 224 aa21.64■■□□□ 1.05
DDX47-205ENST00000535722 SENP3Q9H4L4 574 aaPredicted RBP19.03■□□□□ 0.64
DDX47-205ENST00000535722 PHF23Q9BUL5 403 aaPredicted RBP18.96■□□□□ 0.63
DDX47-205ENST00000535722 FOXD1Q16676 465 aa17.61■□□□□ 0.41
DDX47-205ENST00000535722 PLPPR3Q6T4P5 718 aa17.53■□□□□ 0.4
DDX47-205ENST00000535722 PPP6R1Q9UPN7 881 aa16.77■□□□□ 0.28
DDX47-205ENST00000535722 ADRA2BP18089 450 aa16.75■□□□□ 0.27
DDX47-205ENST00000535722 PIAS4Q8N2W9 510 aaPredicted RBP16.59■□□□□ 0.25
DDX47-205ENST00000535722 MSH5O43196 834 aa16.39■□□□□ 0.21
DDX47-205ENST00000535722 SCAF1Q9H7N4 1312 aaKnown RBP15.45■□□□□ 0.06
DDX47-205ENST00000535722 PPP4R3CPQ6ZMV5 832 aa15.38■□□□□ 0.05
DDX47-205ENST00000535722 MAPK8IP2Q13387 824 aaPredicted RBP15.23■□□□□ 0.03
DDX47-205ENST00000535722 POTEDQ86YR6 584 aa15.16■□□□□ 0.02
DDX47-205ENST00000535722 DMRT2Q9Y5R5 561 aa15.14■□□□□ 0.01
DDX47-205ENST00000535722 CNKSR2Q8WXI2 1034 aa15.03■□□□□ -0
DDX47-205ENST00000535722 NCBP3Q53F19 620 aaKnown RBP15□□□□□ -0.01
DDX47-205ENST00000535722 KCNA4P22459 653 aa14.81□□□□□ -0.04
DDX47-205ENST00000535722 RNF216Q9NWF9 866 aaPredicted RBP14.78□□□□□ -0.04
DDX47-205ENST00000535722 HOXD11P31277 338 aaPredicted RBP14.75□□□□□ -0.05
DDX47-205ENST00000535722 NPM3O75607 178 aaKnown RBP14.71□□□□□ -0.05
DDX47-205ENST00000535722 DCAF8L1A6NGE4 600 aa14.47□□□□□ -0.09
DDX47-205ENST00000535722 DNAJC5BQ9UF47 199 aa14.38□□□□□ -0.11
DDX47-205ENST00000535722 SLC4A1APQ9BWU0 796 aaKnown RBP14.1□□□□□ -0.15
DDX47-205ENST00000535722 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.07□□□□□ -0.164e-6■■□□□ 11.6
DDX47-205ENST00000535722 RNF39Q9H2S5 420 aa13.98□□□□□ -0.17
DDX47-205ENST00000535722 SLC4A2P04920 1241 aa13.91□□□□□ -0.18
DDX47-205ENST00000535722 C1QBPQ07021 282 aaKnown RBP13.85□□□□□ -0.19
DDX47-205ENST00000535722 U3KPZ7 1027 aaPredicted RBP13.78□□□□□ -0.2
DDX47-205ENST00000535722 CACNB1Q02641 598 aaPredicted RBP13.75□□□□□ -0.21
DDX47-205ENST00000535722 FOXD4L1Q9NU39 408 aa13.73□□□□□ -0.21
DDX47-205ENST00000535722 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.66□□□□□ -0.22
DDX47-205ENST00000535722 HNRNPUL2Q1KMD3 747 aaKnown RBP13.66□□□□□ -0.22
DDX47-205ENST00000535722 MYCNP04198 464 aaPredicted RBP13.64□□□□□ -0.23
DDX47-205ENST00000535722 ZBTB22O15209 634 aa13.59□□□□□ -0.23
DDX47-205ENST00000535722 APLP2Q06481 763 aa13.57□□□□□ -0.24
DDX47-205ENST00000535722 SAMD1Q6SPF0 538 aaPredicted RBP13.57□□□□□ -0.24
DDX47-205ENST00000535722 EHMT2Q96KQ7 1210 aa13.46□□□□□ -0.25
DDX47-205ENST00000535722 CAPN15O75808 1086 aa13.43□□□□□ -0.26
DDX47-205ENST00000535722 SPINK5Q9NQ38 1064 aaPredicted RBP13.43□□□□□ -0.26
DDX47-205ENST00000535722 CSRNP3Q8WYN3 585 aa13.39□□□□□ -0.27
DDX47-205ENST00000535722 ZNF219Q9P2Y4 722 aaPredicted RBP13.36□□□□□ -0.27
DDX47-205ENST00000535722 TRHP20396 242 aaPredicted RBP13.31□□□□□ -0.28
DDX47-205ENST00000535722 ATXN8OSP0DMR3 200 aa13.3□□□□□ -0.28
DDX47-205ENST00000535722 DSG3P32926 999 aa13.23□□□□□ -0.29
DDX47-205ENST00000535722 ATF5Q9Y2D1 282 aaPredicted RBP13.19□□□□□ -0.3
DDX47-205ENST00000535722 ABCB7O75027 752 aa13.11□□□□□ -0.31
DDX47-205ENST00000535722 POLA2Q14181 598 aa13.07□□□□□ -0.32
DDX47-205ENST00000535722 ZBTB12Q9Y330 459 aaPredicted RBP12.92□□□□□ -0.34
DDX47-205ENST00000535722 FBLN2P98095 1184 aa12.76□□□□□ -0.37
DDX47-205ENST00000535722 RBM42Q9BTD8 480 aaKnown RBP12.69□□□□□ -0.38
DDX47-205ENST00000535722 MKRN4PQ13434 485 aaPredicted RBP12.63□□□□□ -0.39
DDX47-205ENST00000535722 OSCARQ8IYS5 282 aa12.61□□□□□ -0.39
DDX47-205ENST00000535722 SPDYE2BA6NHP3 402 aa12.51□□□□□ -0.41
DDX47-205ENST00000535722 SPDYE6P0CI01 402 aa12.51□□□□□ -0.41
DDX47-205ENST00000535722 SPDYE2Q495Y8 402 aa12.51□□□□□ -0.41
DDX47-205ENST00000535722 AKT1S1Q96B36 256 aa12.47□□□□□ -0.41
DDX47-205ENST00000535722 ZNF692Q9BU19 519 aaPredicted RBP12.42□□□□□ -0.42
DDX47-205ENST00000535722 SSUH2Q9Y2M2 353 aa12.38□□□□□ -0.43
DDX47-205ENST00000535722 SPDYE4A6NLX3 237 aa12.32□□□□□ -0.44
DDX47-205ENST00000535722 REM2Q8IYK8 340 aaPredicted RBP12.31□□□□□ -0.44
DDX47-205ENST00000535722 PABPN1Q86U42 306 aaKnown RBP eCLIP12.23□□□□□ -0.45
DDX47-205ENST00000535722 SPDYE1Q8NFV5 336 aaPredicted RBP12.19□□□□□ -0.46
DDX47-205ENST00000535722 CHRDL2Q6WN34 429 aa12.18□□□□□ -0.46
DDX47-205ENST00000535722 PITPNM1O00562 1244 aa12.17□□□□□ -0.46
DDX47-205ENST00000535722 FKBP8Q14318 412 aa12.14□□□□□ -0.47
DDX47-205ENST00000535722 CLEC11AQ9Y240 323 aa12.1□□□□□ -0.47
DDX47-205ENST00000535722 PROM2Q8N271 834 aa12.09□□□□□ -0.47
DDX47-205ENST00000535722 STAG3Q9UJ98 1225 aa12.06□□□□□ -0.48
DDX47-205ENST00000535722 PRR29P0C7W0 189 aa11.99□□□□□ -0.49
DDX47-205ENST00000535722 POTEHQ6S545 545 aa11.99□□□□□ -0.49
DDX47-205ENST00000535722 NISCHQ9Y2I1 1504 aa11.99□□□□□ -0.49
DDX47-205ENST00000535722 FXR2P51116 673 aaKnown RBP eCLIP11.98□□□□□ -0.49
DDX47-205ENST00000535722 PIP4P2Q8N4L2 257 aa11.96□□□□□ -0.49
DDX47-205ENST00000535722 PRKAR2AP13861 404 aaKnown RBP11.87□□□□□ -0.51
DDX47-205ENST00000535722 FBXO3Q9UK99 471 aa11.84□□□□□ -0.51
DDX47-205ENST00000535722 CHADLQ6NUI6 762 aa11.78□□□□□ -0.52
DDX47-205ENST00000535722 CREBZFQ9NS37 354 aa11.76□□□□□ -0.53
DDX47-205ENST00000535722 PLEKHG5O94827 1062 aa11.73□□□□□ -0.53
DDX47-205ENST00000535722 FARP1Q9Y4F1 1045 aaPredicted RBP11.71□□□□□ -0.53
DDX47-205ENST00000535722 MIER1Q8N108 512 aa11.7□□□□□ -0.54
DDX47-205ENST00000535722 PLCD3Q8N3E9 789 aa11.67□□□□□ -0.54
DDX47-205ENST00000535722 HAX1O00165 279 aa11.64□□□□□ -0.55
DDX47-205ENST00000535722 NPM1P06748 294 aaKnown RBP eCLIP11.64□□□□□ -0.55
DDX47-205ENST00000535722 ABCC9O60706 1549 aa11.62□□□□□ -0.55
DDX47-205ENST00000535722 VASPP50552 380 aaPredicted RBP11.62□□□□□ -0.55
DDX47-205ENST00000535722 ZBTB47Q9UFB7 747 aaPredicted RBP11.62□□□□□ -0.55
DDX47-205ENST00000535722 MNX1P50219 401 aaPredicted RBP11.61□□□□□ -0.55
DDX47-205ENST00000535722 C19orf67A6NJJ6 358 aa11.58□□□□□ -0.56
DDX47-205ENST00000535722 CD44P16070 742 aaKnown RBP11.52□□□□□ -0.57
DDX47-205ENST00000535722 PAK3O75914 559 aaPredicted RBP11.49□□□□□ -0.57
DDX47-205ENST00000535722 KLHL34Q8N239 644 aa11.47□□□□□ -0.57
DDX47-205ENST00000535722 EVX2Q03828 476 aa11.46□□□□□ -0.57
DDX47-205ENST00000535722 SP7Q8TDD2 431 aaPredicted RBP11.46□□□□□ -0.57
DDX47-205ENST00000535722 IFNLR1Q8IU57 520 aaPredicted RBP11.42□□□□□ -0.58
DDX47-205ENST00000535722 ZRANB1Q9UGI0 708 aa11.42□□□□□ -0.58
DDX47-205ENST00000535722 NUBP1P53384 320 aa11.4□□□□□ -0.58
DDX47-205ENST00000535722 CLCN6P51797 869 aa11.38□□□□□ -0.59
DDX47-205ENST00000535722 RASEFQ8IZ41 740 aa11.38□□□□□ -0.59
DDX47-205ENST00000535722 ZNF579Q8NAF0 562 aaKnown RBP11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms