RNA–Protein interactions for RNA: ENST00000581618.1

PSMD12-206, Transcript of proteasome 26S subunit, non-ATPase 12, humanhuman

TSL 4

Gene PSMD12, Length 613 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD12-206ENST00000581618 NISCHQ9Y2I1 1504 aa45.95■■■■■ 4.95
PSMD12-206ENST00000581618 CCDC180Q9P1Z9 1646 aa41.14■■■■■ 4.18
PSMD12-206ENST00000581618 ABCC9O60706 1549 aa40.66■■■■■ 4.1
PSMD12-206ENST00000581618 RB1CC1Q8TDY2 1594 aa38.86■■■■□ 3.81
PSMD12-206ENST00000581618 NACADO15069 1562 aa38.68■■■■□ 3.78
PSMD12-206ENST00000581618 DCAF8L2P0C7V8 631 aa38.34■■■■□ 3.73
PSMD12-206ENST00000581618 MYO15BQ96JP2 1530 aa38.29■■■■□ 3.72
PSMD12-206ENST00000581618 UNC13AQ9UPW8 1703 aa38.26■■■■□ 3.71
PSMD12-206ENST00000581618 ZCCHC6Q5VYS8 1495 aaKnown RBP38.22■■■■□ 3.71
PSMD12-206ENST00000581618 DCAF1Q9Y4B6 1507 aa37.97■■■■□ 3.67
PSMD12-206ENST00000581618 BICRAQ9NZM4 1560 aa37.88■■■■□ 3.65
PSMD12-206ENST00000581618 PABPN1Q86U42 306 aaKnown RBP eCLIP37.84■■■■□ 3.65
PSMD12-206ENST00000581618 DNAJC5BQ9UF47 199 aa37.81■■■■□ 3.64
PSMD12-206ENST00000581618 SCRIBQ14160 1630 aa37.5■■■■□ 3.59
PSMD12-206ENST00000581618 SHROOM4Q9ULL8 1493 aa37.22■■■■□ 3.55
PSMD12-206ENST00000581618 EIF4G1Q04637 1599 aaKnown RBP36.82■■■■□ 3.48
PSMD12-206ENST00000581618 CC2D2AQ9P2K1 1620 aa36.81■■■■□ 3.48
PSMD12-206ENST00000581618 CECR2Q9BXF3 1484 aa36.54■■■■□ 3.44
PSMD12-206ENST00000581618 SMARCA4P51532 1647 aa35.82■■■■□ 3.32
PSMD12-206ENST00000581618 NCAPD3P42695 1498 aa35.69■■■■□ 3.3
PSMD12-206ENST00000581618 ATAD2BQ9ULI0 1458 aa35.67■■■■□ 3.3
PSMD12-206ENST00000581618 BAZ1AQ9NRL2 1556 aaPredicted RBP35.61■■■■□ 3.29
PSMD12-206ENST00000581618 SMARCA2P51531 1590 aa35.56■■■■□ 3.28
PSMD12-206ENST00000581618 HMGXB3Q12766 1538 aa35.53■■■■□ 3.28
PSMD12-206ENST00000581618 MROH2BQ7Z745 1585 aa35.47■■■■□ 3.27
PSMD12-206ENST00000581618 PEG3Q9GZU2 1588 aa35.47■■■■□ 3.27
PSMD12-206ENST00000581618 BAZ1BQ9UIG0 1483 aaKnown RBP35.31■■■■□ 3.24
PSMD12-206ENST00000581618 NESP48681 1621 aa35.11■■■■□ 3.21
PSMD12-206ENST00000581618 WIZO95785 1651 aa35.11■■■■□ 3.21
PSMD12-206ENST00000581618 ERCC6Q03468 1493 aa34.97■■■■□ 3.19
PSMD12-206ENST00000581618 LAMC3Q9Y6N6 1575 aa34.87■■■■□ 3.17
PSMD12-206ENST00000581618 CUX2O14529 1486 aa34.83■■■■□ 3.17
PSMD12-206ENST00000581618 RSF1Q96T23 1441 aaPredicted RBP34.81■■■■□ 3.16
PSMD12-206ENST00000581618 KIF21AQ7Z4S6 1674 aa34.76■■■■□ 3.15
PSMD12-206ENST00000581618 THOC2Q8NI27 1593 aaKnown RBP34.74■■■■□ 3.15
PSMD12-206ENST00000581618 TOP2AP11388 1531 aaKnown RBP34.61■■■■□ 3.13
PSMD12-206ENST00000581618 CADPSQ9ULU8 1353 aa34.58■■■■□ 3.13
PSMD12-206ENST00000581618 PDS5BQ9NTI5 1447 aa34.52■■■■□ 3.12
PSMD12-206ENST00000581618 CFTRP13569 1480 aa34.34■■■■□ 3.09
PSMD12-206ENST00000581618 MRC2Q9UBG0 1479 aa34.3■■■■□ 3.08
PSMD12-206ENST00000581618 DNAJC5Q9H3Z4 198 aa34.29■■■■□ 3.08
PSMD12-206ENST00000581618 WDR62O43379 1518 aa34.27■■■■□ 3.08
PSMD12-206ENST00000581618 FANCD2Q9BXW9 1451 aa34.25■■■■□ 3.07
PSMD12-206ENST00000581618 CEP164Q9UPV0 1460 aa34.23■■■■□ 3.07
PSMD12-206ENST00000581618 PRDM2Q13029 1718 aa34.22■■■■□ 3.07
PSMD12-206ENST00000581618 CCDC88BA6NC98 1476 aa34.19■■■■□ 3.06
PSMD12-206ENST00000581618 URB2Q14146 1524 aaKnown RBP34.03■■■■□ 3.04
PSMD12-206ENST00000581618 TOPBP1Q92547 1522 aa33.68■■■□□ 2.98
PSMD12-206ENST00000581618 DNMBPQ6XZF7 1577 aa33.6■■■□□ 2.97
PSMD12-206ENST00000581618 ZNF608Q9ULD9 1512 aaPredicted RBP33.53■■■□□ 2.96
PSMD12-206ENST00000581618 IFT140Q96RY7 1462 aa33.5■■■□□ 2.95
PSMD12-206ENST00000581618 ABCC8Q09428 1581 aa33.49■■■□□ 2.95
PSMD12-206ENST00000581618 TARBP1Q13395 1621 aaKnown RBP33.44■■■□□ 2.94
PSMD12-206ENST00000581618 EIF4G3O43432 1585 aaKnown RBP33.4■■■□□ 2.94
PSMD12-206ENST00000581618 SUPT5HO00267 1087 aaKnown RBP33.4■■■□□ 2.94
PSMD12-206ENST00000581618 POLA1P09884 1462 aaPredicted RBP33.37■■■□□ 2.93
PSMD12-206ENST00000581618 CUX1P39880 1505 aa33.3■■■□□ 2.92
PSMD12-206ENST00000581618 RAD54L2Q9Y4B4 1467 aa33.24■■■□□ 2.91
PSMD12-206ENST00000581618 FGD5Q6ZNL6 1462 aa33.21■■■□□ 2.91
PSMD12-206ENST00000581618 AQRO60306 1485 aaKnown RBP eCLIP33.2■■■□□ 2.913e-8■■■■■ 30.9
PSMD12-206ENST00000581618 OSCARQ8IYS5 282 aa33.16■■■□□ 2.9
PSMD12-206ENST00000581618 CHD1O14646 1710 aa33.14■■■□□ 2.89
PSMD12-206ENST00000581618 WDR97A6NE52 1622 aa33.12■■■□□ 2.89
PSMD12-206ENST00000581618 SOGA1O94964 1423 aa33.11■■■□□ 2.89
PSMD12-206ENST00000581618 TDRD9Q8NDG6 1382 aaKnown RBP33.03■■■□□ 2.88
PSMD12-206ENST00000581618 RIMBP3CA6NJZ7 1639 aa32.95■■■□□ 2.87
PSMD12-206ENST00000581618 RIMBP3BA6NNM3 1639 aa32.95■■■□□ 2.87
PSMD12-206ENST00000581618 RIMBP3Q9UFD9 1639 aa32.95■■■□□ 2.87
PSMD12-206ENST00000581618 TRIM41Q8WV44 630 aa32.91■■■□□ 2.86
PSMD12-206ENST00000581618 SNAPC4Q5SXM2 1469 aa32.91■■■□□ 2.86
PSMD12-206ENST00000581618 BIVM-ERCC5R4GMW8 1640 aa32.91■■■□□ 2.86
PSMD12-206ENST00000581618 PBRM1Q86U86 1689 aa32.9■■■□□ 2.86
PSMD12-206ENST00000581618 SYNJ1O43426 1573 aa32.89■■■□□ 2.86
PSMD12-206ENST00000581618 TOP2BQ02880 1626 aa32.86■■■□□ 2.85
PSMD12-206ENST00000581618 ABCA5Q8WWZ7 1642 aa32.86■■■□□ 2.85
PSMD12-206ENST00000581618 ABCA10Q8WWZ4 1543 aa32.84■■■□□ 2.85
PSMD12-206ENST00000581618 ARHGEF11O15085 1522 aa32.83■■■□□ 2.85
PSMD12-206ENST00000581618 GRIN2BQ13224 1484 aa32.81■■■□□ 2.84
PSMD12-206ENST00000581618 MAGI1Q96QZ7 1491 aaPredicted RBP32.79■■■□□ 2.84
PSMD12-206ENST00000581618 WRNQ14191 1432 aaPredicted RBP eCLIP32.77■■■□□ 2.84
PSMD12-206ENST00000581618 GAPVD1Q14C86 1478 aa32.76■■■□□ 2.84
PSMD12-206ENST00000581618 FBLN2P98095 1184 aa32.73■■■□□ 2.83
PSMD12-206ENST00000581618 CLASP1Q7Z460 1538 aa32.71■■■□□ 2.83
PSMD12-206ENST00000581618 SYNJ2O15056 1496 aa32.67■■■□□ 2.82
PSMD12-206ENST00000581618 ARAP1Q96P48 1450 aa32.57■■■□□ 2.8
PSMD12-206ENST00000581618 ADAMTS12P58397 1594 aa32.56■■■□□ 2.8
PSMD12-206ENST00000581618 CHMP7Q8WUX9 453 aaPredicted RBP32.55■■■□□ 2.8
PSMD12-206ENST00000581618 GRIN2AQ12879 1464 aa32.43■■■□□ 2.78
PSMD12-206ENST00000581618 ERICH3Q5RHP9 1530 aa32.42■■■□□ 2.78
PSMD12-206ENST00000581618 CEP170Q5SW79 1584 aa32.4■■■□□ 2.78
PSMD12-206ENST00000581618 CYB5RLQ6IPT4 315 aa32.39■■■□□ 2.78
PSMD12-206ENST00000581618 FHAD1B1AJZ9 1412 aa32.34■■■□□ 2.77
PSMD12-206ENST00000581618 NUP160Q12769 1436 aa32.33■■■□□ 2.77
PSMD12-206ENST00000581618 ERCC6L2Q5T890 1561 aa32.28■■■□□ 2.76
PSMD12-206ENST00000581618 SHROOM2Q13796 1616 aa32.23■■■□□ 2.75
PSMD12-206ENST00000581618 RUSC2Q8N2Y8 1516 aa32.11■■■□□ 2.73
PSMD12-206ENST00000581618 CUL7Q14999 1698 aa32.08■■■□□ 2.73
PSMD12-206ENST00000581618 KIF27Q86VH2 1401 aa32.06■■■□□ 2.72
PSMD12-206ENST00000581618 IGF1RP08069 1367 aa32.06■■■□□ 2.72
PSMD12-206ENST00000581618 PRG4Q92954 1404 aaPredicted RBP31.92■■■□□ 2.7
Retrieved 100 of 20,778 RNA–protein pairs in 111 ms