RNA–Protein interactions for RNA: ENST00000584008.5

PSMD12-207, Transcript of proteasome 26S subunit, non-ATPase 12, humanhuman

TSL 1 (best)

Gene PSMD12, Length 1,752 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD12-207ENST00000584008 NISCHQ9Y2I1 1504 aa42.21■■■■■ 4.35
PSMD12-207ENST00000584008 CCDC180Q9P1Z9 1646 aa37■■■■□ 3.51
PSMD12-207ENST00000584008 ZCCHC6Q5VYS8 1495 aaKnown RBP35.44■■■■□ 3.26
PSMD12-207ENST00000584008 ABCC9O60706 1549 aa35.01■■■■□ 3.2
PSMD12-207ENST00000584008 DCAF1Q9Y4B6 1507 aa34.92■■■■□ 3.18
PSMD12-207ENST00000584008 DCAF8L2P0C7V8 631 aa34.85■■■■□ 3.17
PSMD12-207ENST00000584008 MYO15BQ96JP2 1530 aa34.56■■■■□ 3.12
PSMD12-207ENST00000584008 NACADO15069 1562 aa34.43■■■■□ 3.1
PSMD12-207ENST00000584008 SHROOM4Q9ULL8 1493 aa34.27■■■■□ 3.08
PSMD12-207ENST00000584008 RB1CC1Q8TDY2 1594 aa34.19■■■■□ 3.06
PSMD12-207ENST00000584008 SCRIBQ14160 1630 aa33.95■■■■□ 3.02
PSMD12-207ENST00000584008 UNC13AQ9UPW8 1703 aa33.58■■■□□ 2.97
PSMD12-207ENST00000584008 BICRAQ9NZM4 1560 aa33.12■■■□□ 2.89
PSMD12-207ENST00000584008 PABPN1Q86U42 306 aaKnown RBP eCLIP32.93■■■□□ 2.86
PSMD12-207ENST00000584008 SUPT5HO00267 1087 aaKnown RBP32.88■■■□□ 2.85
PSMD12-207ENST00000584008 CECR2Q9BXF3 1484 aa32.77■■■□□ 2.84
PSMD12-207ENST00000584008 RSF1Q96T23 1441 aaPredicted RBP32.64■■■□□ 2.82
PSMD12-207ENST00000584008 BAZ1AQ9NRL2 1556 aaPredicted RBP32.64■■■□□ 2.82
PSMD12-207ENST00000584008 MROH2BQ7Z745 1585 aa32.59■■■□□ 2.81
PSMD12-207ENST00000584008 SMARCA4P51532 1647 aa32.53■■■□□ 2.8
PSMD12-207ENST00000584008 WIZO95785 1651 aa32.37■■■□□ 2.77
PSMD12-207ENST00000584008 EIF4G1Q04637 1599 aaKnown RBP32.15■■■□□ 2.74
PSMD12-207ENST00000584008 PEG3Q9GZU2 1588 aa32.12■■■□□ 2.73
PSMD12-207ENST00000584008 TOP2AP11388 1531 aaKnown RBP32.03■■■□□ 2.72
PSMD12-207ENST00000584008 SMARCA2P51531 1590 aa32.01■■■□□ 2.71
PSMD12-207ENST00000584008 ATAD2BQ9ULI0 1458 aa31.97■■■□□ 2.71
PSMD12-207ENST00000584008 BAZ1BQ9UIG0 1483 aaKnown RBP31.82■■■□□ 2.68
PSMD12-207ENST00000584008 CC2D2AQ9P2K1 1620 aa31.73■■■□□ 2.67
PSMD12-207ENST00000584008 HMGXB3Q12766 1538 aa31.72■■■□□ 2.67
PSMD12-207ENST00000584008 NCAPD3P42695 1498 aa31.72■■■□□ 2.67
PSMD12-207ENST00000584008 CCDC88BA6NC98 1476 aa31.64■■■□□ 2.65
PSMD12-207ENST00000584008 CHIC1Q5VXU3 224 aa31.38■■■□□ 2.61
PSMD12-207ENST00000584008 PRDM2Q13029 1718 aa31.01■■■□□ 2.55
PSMD12-207ENST00000584008 CFTRP13569 1480 aa30.97■■■□□ 2.55
PSMD12-207ENST00000584008 ABCC8Q09428 1581 aa30.95■■■□□ 2.55
PSMD12-207ENST00000584008 TRIM41Q8WV44 630 aa30.94■■■□□ 2.54
PSMD12-207ENST00000584008 DNAJC5BQ9UF47 199 aa30.92■■■□□ 2.54
PSMD12-207ENST00000584008 CADPSQ9ULU8 1353 aa30.89■■■□□ 2.53
PSMD12-207ENST00000584008 WRNQ14191 1432 aaPredicted RBP eCLIP30.76■■■□□ 2.51
PSMD12-207ENST00000584008 LAMC3Q9Y6N6 1575 aa30.74■■■□□ 2.51
PSMD12-207ENST00000584008 NESP48681 1621 aa30.68■■■□□ 2.5
PSMD12-207ENST00000584008 SYNJ1O43426 1573 aa30.67■■■□□ 2.5
PSMD12-207ENST00000584008 BIVM-ERCC5R4GMW8 1640 aa30.58■■■□□ 2.49
PSMD12-207ENST00000584008 TOP2BQ02880 1626 aa30.58■■■□□ 2.49
PSMD12-207ENST00000584008 FANCD2Q9BXW9 1451 aa30.57■■■□□ 2.48
PSMD12-207ENST00000584008 CUX1P39880 1505 aa30.5■■■□□ 2.47
PSMD12-207ENST00000584008 PDS5BQ9NTI5 1447 aa30.46■■■□□ 2.47
PSMD12-207ENST00000584008 CEP164Q9UPV0 1460 aa30.43■■■□□ 2.46
PSMD12-207ENST00000584008 KIF21AQ7Z4S6 1674 aa30.42■■■□□ 2.46
PSMD12-207ENST00000584008 FAM9AQ8IZU1 332 aaPredicted RBP30.36■■■□□ 2.45
PSMD12-207ENST00000584008 DNMBPQ6XZF7 1577 aa30.32■■■□□ 2.45
PSMD12-207ENST00000584008 SOGA1O94964 1423 aa30.28■■■□□ 2.44
PSMD12-207ENST00000584008 EEA1Q15075 1411 aa30.26■■■□□ 2.43
PSMD12-207ENST00000584008 TOPBP1Q92547 1522 aa30.24■■■□□ 2.43
PSMD12-207ENST00000584008 URB2Q14146 1524 aaKnown RBP30.2■■■□□ 2.43
PSMD12-207ENST00000584008 FGD5Q6ZNL6 1462 aa30.2■■■□□ 2.43
PSMD12-207ENST00000584008 RUSC2Q8N2Y8 1516 aa30.18■■■□□ 2.42
PSMD12-207ENST00000584008 LOC105371045A0A1W2PR82 267 aa30.14■■■□□ 2.42
PSMD12-207ENST00000584008 MRC2Q9UBG0 1479 aa30.1■■■□□ 2.41
PSMD12-207ENST00000584008 ERCC6Q03468 1493 aa30.07■■■□□ 2.4
PSMD12-207ENST00000584008 POLA1P09884 1462 aaPredicted RBP30.06■■■□□ 2.4
PSMD12-207ENST00000584008 CSRNP3Q8WYN3 585 aa30.04■■■□□ 2.4
PSMD12-207ENST00000584008 KIF27Q86VH2 1401 aa30■■■□□ 2.39
PSMD12-207ENST00000584008 CUX2O14529 1486 aa29.97■■■□□ 2.39
PSMD12-207ENST00000584008 WDR62O43379 1518 aa29.96■■■□□ 2.39
PSMD12-207ENST00000584008 RAD54L2Q9Y4B4 1467 aa29.95■■■□□ 2.38
PSMD12-207ENST00000584008 WDR97A6NE52 1622 aa29.93■■■□□ 2.38
PSMD12-207ENST00000584008 EHMT2Q96KQ7 1210 aa29.92■■■□□ 2.38
PSMD12-207ENST00000584008 THOC2Q8NI27 1593 aaKnown RBP29.92■■■□□ 2.38
PSMD12-207ENST00000584008 ABCA10Q8WWZ4 1543 aa29.92■■■□□ 2.38
PSMD12-207ENST00000584008 KIF21BO75037 1637 aa29.92■■■□□ 2.38
PSMD12-207ENST00000584008 GOLGA3Q08378 1498 aa29.84■■■□□ 2.37
PSMD12-207ENST00000584008 TARBP1Q13395 1621 aaKnown RBP29.83■■■□□ 2.37
PSMD12-207ENST00000584008 ABCA5Q8WWZ7 1642 aa29.74■■■□□ 2.35
PSMD12-207ENST00000584008 PRXQ9BXM0 1461 aa29.74■■■□□ 2.35
PSMD12-207ENST00000584008 ERICH3Q5RHP9 1530 aa29.73■■■□□ 2.35
PSMD12-207ENST00000584008 IFT140Q96RY7 1462 aa29.7■■■□□ 2.34
PSMD12-207ENST00000584008 RAPGEF2Q9Y4G8 1499 aa29.7■■■□□ 2.34
PSMD12-207ENST00000584008 IGF1RP08069 1367 aa29.69■■■□□ 2.34
PSMD12-207ENST00000584008 TNIKQ9UKE5 1360 aa29.67■■■□□ 2.34
PSMD12-207ENST00000584008 UBTFP17480 764 aaKnown RBP29.67■■■□□ 2.34
PSMD12-207ENST00000584008 TDRD9Q8NDG6 1382 aaKnown RBP29.65■■■□□ 2.34
PSMD12-207ENST00000584008 GAPVD1Q14C86 1478 aa29.64■■■□□ 2.34
PSMD12-207ENST00000584008 CUL7Q14999 1698 aa29.63■■■□□ 2.33
PSMD12-207ENST00000584008 PBRM1Q86U86 1689 aa29.6■■■□□ 2.33
PSMD12-207ENST00000584008 CARMIL1Q5VZK9 1371 aa29.57■■■□□ 2.32
PSMD12-207ENST00000584008 CEP162Q5TB80 1403 aa29.51■■■□□ 2.32
PSMD12-207ENST00000584008 ZNF608Q9ULD9 1512 aaPredicted RBP29.51■■■□□ 2.31
PSMD12-207ENST00000584008 AQRO60306 1485 aaKnown RBP eCLIP29.5■■■□□ 2.311e-7■■■■■ 27
PSMD12-207ENST00000584008 EIF4G3O43432 1585 aaKnown RBP29.48■■■□□ 2.31
PSMD12-207ENST00000584008 GRIN2BQ13224 1484 aa29.44■■■□□ 2.3
PSMD12-207ENST00000584008 ADAMTS12P58397 1594 aa29.37■■■□□ 2.29
PSMD12-207ENST00000584008 CLIP1P30622 1438 aa29.33■■■□□ 2.29
PSMD12-207ENST00000584008 CTTNBP2Q8WZ74 1663 aa29.32■■■□□ 2.28
PSMD12-207ENST00000584008 FHAD1B1AJZ9 1412 aa29.31■■■□□ 2.28
PSMD12-207ENST00000584008 SNAPC4Q5SXM2 1469 aa29.27■■■□□ 2.28
PSMD12-207ENST00000584008 MAGI1Q96QZ7 1491 aaPredicted RBP29.22■■■□□ 2.27
PSMD12-207ENST00000584008 RANGAP1P46060 587 aaPredicted RBP29.21■■■□□ 2.27
PSMD12-207ENST00000584008 SYNJ2O15056 1496 aa29.1■■■□□ 2.25
PSMD12-207ENST00000584008 GRIN2AQ12879 1464 aa29.08■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms