RNA–Protein interactions for RNA: ENST00000488955.1

TBC1D4-206, Transcript of TBC1 domain family member 4, humanhuman

TSL 5

Gene TBC1D4, Length 336 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D4-206ENST00000488955 NISCHQ9Y2I1 1504 aa20.34■□□□□ 0.85
TBC1D4-206ENST00000488955 CCDC180Q9P1Z9 1646 aa18.12■□□□□ 0.49
TBC1D4-206ENST00000488955 ABCC9O60706 1549 aa17.63■□□□□ 0.41
TBC1D4-206ENST00000488955 MYO15BQ96JP2 1530 aa17.06■□□□□ 0.32
TBC1D4-206ENST00000488955 NACADO15069 1562 aa17.06■□□□□ 0.32
TBC1D4-206ENST00000488955 RB1CC1Q8TDY2 1594 aa17.02■□□□□ 0.32
TBC1D4-206ENST00000488955 ZCCHC6Q5VYS8 1495 aaKnown RBP16.93■□□□□ 0.3
TBC1D4-206ENST00000488955 DCAF1Q9Y4B6 1507 aa16.93■□□□□ 0.3
TBC1D4-206ENST00000488955 DCAF8L2P0C7V8 631 aa16.72■□□□□ 0.27
TBC1D4-206ENST00000488955 UNC13AQ9UPW8 1703 aa16.66■□□□□ 0.26
TBC1D4-206ENST00000488955 BICRAQ9NZM4 1560 aa16.6■□□□□ 0.25
TBC1D4-206ENST00000488955 SHROOM4Q9ULL8 1493 aa16.47■□□□□ 0.23
TBC1D4-206ENST00000488955 PABPN1Q86U42 306 aaKnown RBP eCLIP16.45■□□□□ 0.22
TBC1D4-206ENST00000488955 DNAJC5BQ9UF47 199 aa16.37■□□□□ 0.21
TBC1D4-206ENST00000488955 SCRIBQ14160 1630 aa16.36■□□□□ 0.21
TBC1D4-206ENST00000488955 EIF4G1Q04637 1599 aaKnown RBP16.09■□□□□ 0.17
TBC1D4-206ENST00000488955 CC2D2AQ9P2K1 1620 aa16.01■□□□□ 0.15
TBC1D4-206ENST00000488955 CECR2Q9BXF3 1484 aa15.91■□□□□ 0.14
TBC1D4-206ENST00000488955 NCAPD3P42695 1498 aa15.78■□□□□ 0.12
TBC1D4-206ENST00000488955 SMARCA4P51532 1647 aa15.76■□□□□ 0.11
TBC1D4-206ENST00000488955 PEG3Q9GZU2 1588 aa15.73■□□□□ 0.11
TBC1D4-206ENST00000488955 BAZ1AQ9NRL2 1556 aaPredicted RBP15.73■□□□□ 0.11
TBC1D4-206ENST00000488955 ATAD2BQ9ULI0 1458 aa15.72■□□□□ 0.11
TBC1D4-206ENST00000488955 SMARCA2P51531 1590 aa15.67■□□□□ 0.1
TBC1D4-206ENST00000488955 HMGXB3Q12766 1538 aa15.65■□□□□ 0.1
TBC1D4-206ENST00000488955 MROH2BQ7Z745 1585 aa15.63■□□□□ 0.09
TBC1D4-206ENST00000488955 BAZ1BQ9UIG0 1483 aaKnown RBP15.5■□□□□ 0.07
TBC1D4-206ENST00000488955 RSF1Q96T23 1441 aaPredicted RBP15.46■□□□□ 0.07
TBC1D4-206ENST00000488955 WIZO95785 1651 aa15.41■□□□□ 0.06
TBC1D4-206ENST00000488955 LAMC3Q9Y6N6 1575 aa15.31■□□□□ 0.04
TBC1D4-206ENST00000488955 TOP2AP11388 1531 aaKnown RBP15.29■□□□□ 0.04
TBC1D4-206ENST00000488955 NESP48681 1621 aa15.28■□□□□ 0.04
TBC1D4-206ENST00000488955 CADPSQ9ULU8 1353 aa15.25■□□□□ 0.03
TBC1D4-206ENST00000488955 CUX2O14529 1486 aa15.18■□□□□ 0.02
TBC1D4-206ENST00000488955 CFTRP13569 1480 aa15.18■□□□□ 0.02
TBC1D4-206ENST00000488955 PDS5BQ9NTI5 1447 aa15.17■□□□□ 0.02
TBC1D4-206ENST00000488955 ERCC6Q03468 1493 aa15.14■□□□□ 0.01
TBC1D4-206ENST00000488955 THOC2Q8NI27 1593 aaKnown RBP15.12■□□□□ 0.01
TBC1D4-206ENST00000488955 CCDC88BA6NC98 1476 aa15.12■□□□□ 0.01
TBC1D4-206ENST00000488955 KIF21AQ7Z4S6 1674 aa15.09■□□□□ 0.01
TBC1D4-206ENST00000488955 FANCD2Q9BXW9 1451 aa15.01□□□□□ -0.01
TBC1D4-206ENST00000488955 WDR62O43379 1518 aa15.01□□□□□ -0.01
TBC1D4-206ENST00000488955 MRC2Q9UBG0 1479 aa15.01□□□□□ -0.01
TBC1D4-206ENST00000488955 PRDM2Q13029 1718 aa15□□□□□ -0.01
TBC1D4-206ENST00000488955 CEP164Q9UPV0 1460 aa14.98□□□□□ -0.01
TBC1D4-206ENST00000488955 URB2Q14146 1524 aaKnown RBP14.91□□□□□ -0.02
TBC1D4-206ENST00000488955 ABCC8Q09428 1581 aa14.84□□□□□ -0.03
TBC1D4-206ENST00000488955 DNAJC5Q9H3Z4 198 aa14.82□□□□□ -0.04
TBC1D4-206ENST00000488955 TOPBP1Q92547 1522 aa14.8□□□□□ -0.04
TBC1D4-206ENST00000488955 SUPT5HO00267 1087 aaKnown RBP14.78□□□□□ -0.04
TBC1D4-206ENST00000488955 DNMBPQ6XZF7 1577 aa14.77□□□□□ -0.05
TBC1D4-206ENST00000488955 IFT140Q96RY7 1462 aa14.73□□□□□ -0.05
TBC1D4-206ENST00000488955 TARBP1Q13395 1621 aaKnown RBP14.69□□□□□ -0.06
TBC1D4-206ENST00000488955 POLA1P09884 1462 aaPredicted RBP14.67□□□□□ -0.06
TBC1D4-206ENST00000488955 CUX1P39880 1505 aa14.66□□□□□ -0.06
TBC1D4-206ENST00000488955 ZNF608Q9ULD9 1512 aaPredicted RBP14.63□□□□□ -0.07
TBC1D4-206ENST00000488955 WDR97A6NE52 1622 aa14.6□□□□□ -0.07
TBC1D4-206ENST00000488955 FGD5Q6ZNL6 1462 aa14.59□□□□□ -0.07
TBC1D4-206ENST00000488955 SOGA1O94964 1423 aa14.58□□□□□ -0.07
TBC1D4-206ENST00000488955 RAD54L2Q9Y4B4 1467 aa14.56□□□□□ -0.08
TBC1D4-206ENST00000488955 EIF4G3O43432 1585 aaKnown RBP14.56□□□□□ -0.08
TBC1D4-206ENST00000488955 BIVM-ERCC5R4GMW8 1640 aa14.55□□□□□ -0.08
TBC1D4-206ENST00000488955 TOP2BQ02880 1626 aa14.53□□□□□ -0.08
TBC1D4-206ENST00000488955 AQRO60306 1485 aaKnown RBP eCLIP14.53□□□□□ -0.08
TBC1D4-206ENST00000488955 ABCA10Q8WWZ4 1543 aa14.51□□□□□ -0.09
TBC1D4-206ENST00000488955 WRNQ14191 1432 aaPredicted RBP eCLIP14.51□□□□□ -0.09
TBC1D4-206ENST00000488955 OSCARQ8IYS5 282 aa14.49□□□□□ -0.09
TBC1D4-206ENST00000488955 SYNJ1O43426 1573 aa14.48□□□□□ -0.09
TBC1D4-206ENST00000488955 TDRD9Q8NDG6 1382 aaKnown RBP14.47□□□□□ -0.09
TBC1D4-206ENST00000488955 ABCA5Q8WWZ7 1642 aa14.44□□□□□ -0.1
TBC1D4-206ENST00000488955 GRIN2BQ13224 1484 aa14.44□□□□□ -0.1
TBC1D4-206ENST00000488955 MAGI1Q96QZ7 1491 aaPredicted RBP14.43□□□□□ -0.1
TBC1D4-206ENST00000488955 GAPVD1Q14C86 1478 aa14.41□□□□□ -0.1
TBC1D4-206ENST00000488955 CHD1O14646 1710 aa14.37□□□□□ -0.11
TBC1D4-206ENST00000488955 SNAPC4Q5SXM2 1469 aa14.37□□□□□ -0.11
TBC1D4-206ENST00000488955 SYNJ2O15056 1496 aa14.36□□□□□ -0.11
TBC1D4-206ENST00000488955 PBRM1Q86U86 1689 aa14.35□□□□□ -0.11
TBC1D4-206ENST00000488955 ERICH3Q5RHP9 1530 aa14.33□□□□□ -0.12
TBC1D4-206ENST00000488955 CLASP1Q7Z460 1538 aa14.31□□□□□ -0.12
TBC1D4-206ENST00000488955 ADAMTS12P58397 1594 aa14.27□□□□□ -0.12
TBC1D4-206ENST00000488955 FHAD1B1AJZ9 1412 aa14.27□□□□□ -0.12
TBC1D4-206ENST00000488955 NUP160Q12769 1436 aa14.26□□□□□ -0.13
TBC1D4-206ENST00000488955 CHMP7Q8WUX9 453 aaPredicted RBP14.26□□□□□ -0.13
TBC1D4-206ENST00000488955 ARHGEF11O15085 1522 aa14.25□□□□□ -0.13
TBC1D4-206ENST00000488955 RIMBP3CA6NJZ7 1639 aa14.25□□□□□ -0.13
TBC1D4-206ENST00000488955 RIMBP3BA6NNM3 1639 aa14.25□□□□□ -0.13
TBC1D4-206ENST00000488955 RIMBP3Q9UFD9 1639 aa14.25□□□□□ -0.13
TBC1D4-206ENST00000488955 GRIN2AQ12879 1464 aa14.25□□□□□ -0.13
TBC1D4-206ENST00000488955 IGF1RP08069 1367 aa14.24□□□□□ -0.13
TBC1D4-206ENST00000488955 KIF27Q86VH2 1401 aa14.22□□□□□ -0.13
TBC1D4-206ENST00000488955 FBLN2P98095 1184 aa14.21□□□□□ -0.13
TBC1D4-206ENST00000488955 CEP170Q5SW79 1584 aa14.17□□□□□ -0.14
TBC1D4-206ENST00000488955 SHROOM2Q13796 1616 aa14.15□□□□□ -0.14
TBC1D4-206ENST00000488955 CUL7Q14999 1698 aa14.14□□□□□ -0.15
TBC1D4-206ENST00000488955 ARAP1Q96P48 1450 aa14.14□□□□□ -0.15
TBC1D4-206ENST00000488955 CARMIL1Q5VZK9 1371 aa14.09□□□□□ -0.15
TBC1D4-206ENST00000488955 RUSC2Q8N2Y8 1516 aa14.07□□□□□ -0.16
TBC1D4-206ENST00000488955 KIAA0586Q9BVV6 1533 aa14.07□□□□□ -0.16
TBC1D4-206ENST00000488955 CYB5RLQ6IPT4 315 aa14.05□□□□□ -0.16
TBC1D4-206ENST00000488955 JPH4Q96JJ6 628 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms