RNA–Protein interactions for RNA: ENST00000615080.4

LARP4-220, Transcript of La ribonucleoprotein domain family member 4, humanhuman

TSL 5 BASIC

Gene LARP4, Length 856 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LARP4-220ENST00000615080 NISCHQ9Y2I1 1504 aa37.01■■■■□ 3.52
LARP4-220ENST00000615080 CCDC180Q9P1Z9 1646 aa33.02■■■□□ 2.88
LARP4-220ENST00000615080 ABCC9O60706 1549 aa32.42■■■□□ 2.78
LARP4-220ENST00000615080 RB1CC1Q8TDY2 1594 aa31.18■■■□□ 2.58
LARP4-220ENST00000615080 NACADO15069 1562 aa31.1■■■□□ 2.57
LARP4-220ENST00000615080 DCAF8L2P0C7V8 631 aa30.99■■■□□ 2.55
LARP4-220ENST00000615080 MYO15BQ96JP2 1530 aa30.88■■■□□ 2.53
LARP4-220ENST00000615080 ZCCHC6Q5VYS8 1495 aaKnown RBP30.8■■■□□ 2.52
LARP4-220ENST00000615080 DCAF1Q9Y4B6 1507 aa30.67■■■□□ 2.5
LARP4-220ENST00000615080 UNC13AQ9UPW8 1703 aa30.39■■■□□ 2.45
LARP4-220ENST00000615080 PABPN1Q86U42 306 aaKnown RBP eCLIP30.25■■■□□ 2.43
LARP4-220ENST00000615080 DNAJC5BQ9UF47 199 aa30.19■■■□□ 2.42
LARP4-220ENST00000615080 BICRAQ9NZM4 1560 aa30.16■■■□□ 2.42
LARP4-220ENST00000615080 SCRIBQ14160 1630 aa30.07■■■□□ 2.4
LARP4-220ENST00000615080 SHROOM4Q9ULL8 1493 aa29.96■■■□□ 2.39
LARP4-220ENST00000615080 EIF4G1Q04637 1599 aaKnown RBP29.43■■■□□ 2.3
LARP4-220ENST00000615080 CC2D2AQ9P2K1 1620 aa29.34■■■□□ 2.29
LARP4-220ENST00000615080 CECR2Q9BXF3 1484 aa29.19■■■□□ 2.26
LARP4-220ENST00000615080 SMARCA4P51532 1647 aa28.76■■■□□ 2.2
LARP4-220ENST00000615080 BAZ1AQ9NRL2 1556 aaPredicted RBP28.74■■■□□ 2.19
LARP4-220ENST00000615080 NCAPD3P42695 1498 aa28.68■■■□□ 2.18
LARP4-220ENST00000615080 SMARCA2P51531 1590 aa28.66■■■□□ 2.18
LARP4-220ENST00000615080 ATAD2BQ9ULI0 1458 aa28.65■■■□□ 2.18
LARP4-220ENST00000615080 HMGXB3Q12766 1538 aa28.54■■■□□ 2.16
LARP4-220ENST00000615080 PEG3Q9GZU2 1588 aa28.5■■■□□ 2.15
LARP4-220ENST00000615080 MROH2BQ7Z745 1585 aa28.49■■■□□ 2.15
LARP4-220ENST00000615080 BAZ1BQ9UIG0 1483 aaKnown RBP28.43■■■□□ 2.14
LARP4-220ENST00000615080 WIZO95785 1651 aa28.17■■■□□ 2.1
LARP4-220ENST00000615080 RSF1Q96T23 1441 aaPredicted RBP28.12■■■□□ 2.09
LARP4-220ENST00000615080 ERCC6Q03468 1493 aa28.03■■■□□ 2.08
LARP4-220ENST00000615080 DNAJC5Q9H3Z4 198 aa28.02■■■□□ 2.08
LARP4-220ENST00000615080 NESP48681 1621 aa27.99■■■□□ 2.07
LARP4-220ENST00000615080 LAMC3Q9Y6N6 1575 aa27.97■■■□□ 2.07
LARP4-220ENST00000615080 TOP2AP11388 1531 aaKnown RBP27.91■■■□□ 2.06
LARP4-220ENST00000615080 CADPSQ9ULU8 1353 aa27.84■■■□□ 2.05
LARP4-220ENST00000615080 PDS5BQ9NTI5 1447 aa27.81■■■□□ 2.04
LARP4-220ENST00000615080 CUX2O14529 1486 aa27.81■■■□□ 2.04
LARP4-220ENST00000615080 KIF21AQ7Z4S6 1674 aa27.67■■■□□ 2.02
LARP4-220ENST00000615080 THOC2Q8NI27 1593 aaKnown RBP27.63■■■□□ 2.01
LARP4-220ENST00000615080 CFTRP13569 1480 aa27.63■■■□□ 2.01
LARP4-220ENST00000615080 CCDC88BA6NC98 1476 aa27.55■■■□□ 2
LARP4-220ENST00000615080 FANCD2Q9BXW9 1451 aa27.51■■■□□ 2
LARP4-220ENST00000615080 CEP164Q9UPV0 1460 aa27.51■■■□□ 2
LARP4-220ENST00000615080 MRC2Q9UBG0 1479 aa27.51■■□□□ 1.99
LARP4-220ENST00000615080 PRDM2Q13029 1718 aa27.41■■□□□ 1.98
LARP4-220ENST00000615080 WDR62O43379 1518 aa27.41■■□□□ 1.98
LARP4-220ENST00000615080 SUPT5HO00267 1087 aaKnown RBP27.26■■□□□ 1.95
LARP4-220ENST00000615080 URB2Q14146 1524 aaKnown RBP27.21■■□□□ 1.95
LARP4-220ENST00000615080 ABCC8Q09428 1581 aa27.09■■□□□ 1.93
LARP4-220ENST00000615080 TOPBP1Q92547 1522 aa27.04■■□□□ 1.92
LARP4-220ENST00000615080 DNMBPQ6XZF7 1577 aa27.01■■□□□ 1.92
LARP4-220ENST00000615080 IFT140Q96RY7 1462 aa26.94■■□□□ 1.9
LARP4-220ENST00000615080 POLA1P09884 1462 aaPredicted RBP26.8■■□□□ 1.88
LARP4-220ENST00000615080 ZNF608Q9ULD9 1512 aaPredicted RBP26.78■■□□□ 1.88
LARP4-220ENST00000615080 CUX1P39880 1505 aa26.75■■□□□ 1.87
LARP4-220ENST00000615080 TARBP1Q13395 1621 aaKnown RBP26.75■■□□□ 1.87
LARP4-220ENST00000615080 FGD5Q6ZNL6 1462 aa26.7■■□□□ 1.87
LARP4-220ENST00000615080 SOGA1O94964 1423 aa26.7■■□□□ 1.86
LARP4-220ENST00000615080 EIF4G3O43432 1585 aaKnown RBP26.7■■□□□ 1.86
LARP4-220ENST00000615080 TRIM41Q8WV44 630 aa26.68■■□□□ 1.86
LARP4-220ENST00000615080 RAD54L2Q9Y4B4 1467 aa26.65■■□□□ 1.86
LARP4-220ENST00000615080 OSCARQ8IYS5 282 aa26.61■■□□□ 1.85
LARP4-220ENST00000615080 AQRO60306 1485 aaKnown RBP eCLIP26.61■■□□□ 1.854e-8■■■■■ 32.5
LARP4-220ENST00000615080 WDR97A6NE52 1622 aa26.61■■□□□ 1.85
LARP4-220ENST00000615080 WRNQ14191 1432 aaPredicted RBP eCLIP26.55■■□□□ 1.84
LARP4-220ENST00000615080 TDRD9Q8NDG6 1382 aaKnown RBP26.54■■□□□ 1.84
LARP4-220ENST00000615080 TOP2BQ02880 1626 aa26.5■■□□□ 1.83
LARP4-220ENST00000615080 BIVM-ERCC5R4GMW8 1640 aa26.5■■□□□ 1.83
LARP4-220ENST00000615080 ABCA10Q8WWZ4 1543 aa26.45■■□□□ 1.83
LARP4-220ENST00000615080 SYNJ1O43426 1573 aa26.45■■□□□ 1.82
LARP4-220ENST00000615080 GRIN2BQ13224 1484 aa26.42■■□□□ 1.82
LARP4-220ENST00000615080 GAPVD1Q14C86 1478 aa26.39■■□□□ 1.82
LARP4-220ENST00000615080 SNAPC4Q5SXM2 1469 aa26.39■■□□□ 1.82
LARP4-220ENST00000615080 MAGI1Q96QZ7 1491 aaPredicted RBP26.39■■□□□ 1.82
LARP4-220ENST00000615080 CHD1O14646 1710 aa26.38■■□□□ 1.81
LARP4-220ENST00000615080 FBLN2P98095 1184 aa26.36■■□□□ 1.81
LARP4-220ENST00000615080 ABCA5Q8WWZ7 1642 aa26.35■■□□□ 1.81
LARP4-220ENST00000615080 PBRM1Q86U86 1689 aa26.33■■□□□ 1.81
LARP4-220ENST00000615080 CHMP7Q8WUX9 453 aaPredicted RBP26.29■■□□□ 1.8
LARP4-220ENST00000615080 SYNJ2O15056 1496 aa26.28■■□□□ 1.8
LARP4-220ENST00000615080 ERICH3Q5RHP9 1530 aa26.16■■□□□ 1.78
LARP4-220ENST00000615080 RIMBP3CA6NJZ7 1639 aa26.16■■□□□ 1.78
LARP4-220ENST00000615080 RIMBP3BA6NNM3 1639 aa26.16■■□□□ 1.78
LARP4-220ENST00000615080 RIMBP3Q9UFD9 1639 aa26.16■■□□□ 1.78
LARP4-220ENST00000615080 ARHGEF11O15085 1522 aa26.15■■□□□ 1.78
LARP4-220ENST00000615080 ADAMTS12P58397 1594 aa26.12■■□□□ 1.77
LARP4-220ENST00000615080 CLASP1Q7Z460 1538 aa26.1■■□□□ 1.77
LARP4-220ENST00000615080 FHAD1B1AJZ9 1412 aa26.09■■□□□ 1.77
LARP4-220ENST00000615080 GRIN2AQ12879 1464 aa26.07■■□□□ 1.76
LARP4-220ENST00000615080 KIF27Q86VH2 1401 aa26.03■■□□□ 1.76
LARP4-220ENST00000615080 NUP160Q12769 1436 aa25.96■■□□□ 1.75
LARP4-220ENST00000615080 ARAP1Q96P48 1450 aa25.91■■□□□ 1.74
LARP4-220ENST00000615080 CEP170Q5SW79 1584 aa25.91■■□□□ 1.74
LARP4-220ENST00000615080 CYB5RLQ6IPT4 315 aa25.91■■□□□ 1.74
LARP4-220ENST00000615080 IGF1RP08069 1367 aa25.9■■□□□ 1.74
LARP4-220ENST00000615080 CUL7Q14999 1698 aa25.89■■□□□ 1.73
LARP4-220ENST00000615080 SHROOM2Q13796 1616 aa25.77■■□□□ 1.72
LARP4-220ENST00000615080 CARMIL1Q5VZK9 1371 aa25.77■■□□□ 1.72
LARP4-220ENST00000615080 RUSC2Q8N2Y8 1516 aa25.73■■□□□ 1.71
LARP4-220ENST00000615080 JPH4Q96JJ6 628 aa25.69■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms