Protein–RNA interactions for Protein: Q9UN71

PCDHGB4, Protocadherin gamma-B4, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4Q9UN71 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC25.55■■□□□ 1.68
PCDHGB4Q9UN71 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
PCDHGB4Q9UN71 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC25.55■■□□□ 1.68
PCDHGB4Q9UN71 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC25.55■■□□□ 1.68
PCDHGB4Q9UN71 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC25.55■■□□□ 1.68
PCDHGB4Q9UN71 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
PCDHGB4Q9UN71 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC25.54■■□□□ 1.68
PCDHGB4Q9UN71 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
PCDHGB4Q9UN71 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
PCDHGB4Q9UN71 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC25.53■■□□□ 1.68
PCDHGB4Q9UN71 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC25.53■■□□□ 1.68
PCDHGB4Q9UN71 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC25.52■■□□□ 1.68
PCDHGB4Q9UN71 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
PCDHGB4Q9UN71 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC25.51■■□□□ 1.67
PCDHGB4Q9UN71 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC25.51■■□□□ 1.67
PCDHGB4Q9UN71 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC25.49■■□□□ 1.67
PCDHGB4Q9UN71 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC25.49■■□□□ 1.67
PCDHGB4Q9UN71 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC25.49■■□□□ 1.67
PCDHGB4Q9UN71 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
PCDHGB4Q9UN71 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
PCDHGB4Q9UN71 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC25.47■■□□□ 1.67
PCDHGB4Q9UN71 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC25.46■■□□□ 1.67
PCDHGB4Q9UN71 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC25.46■■□□□ 1.67
PCDHGB4Q9UN71 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC25.46■■□□□ 1.67
PCDHGB4Q9UN71 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC25.46■■□□□ 1.67
PCDHGB4Q9UN71 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC25.46■■□□□ 1.67
PCDHGB4Q9UN71 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.67
PCDHGB4Q9UN71 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
PCDHGB4Q9UN71 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC25.45■■□□□ 1.66
PCDHGB4Q9UN71 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
PCDHGB4Q9UN71 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
PCDHGB4Q9UN71 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
PCDHGB4Q9UN71 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
PCDHGB4Q9UN71 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
PCDHGB4Q9UN71 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC25.43■■□□□ 1.66
PCDHGB4Q9UN71 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC25.41■■□□□ 1.66
PCDHGB4Q9UN71 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
PCDHGB4Q9UN71 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC25.4■■□□□ 1.66
PCDHGB4Q9UN71 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC25.39■■□□□ 1.65
PCDHGB4Q9UN71 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
PCDHGB4Q9UN71 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC25.38■■□□□ 1.65
PCDHGB4Q9UN71 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
PCDHGB4Q9UN71 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
PCDHGB4Q9UN71 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC25.37■■□□□ 1.65
PCDHGB4Q9UN71 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
PCDHGB4Q9UN71 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC25.36■■□□□ 1.65
PCDHGB4Q9UN71 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
PCDHGB4Q9UN71 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC25.36■■□□□ 1.65
PCDHGB4Q9UN71 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC25.36■■□□□ 1.65
PCDHGB4Q9UN71 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
PCDHGB4Q9UN71 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
PCDHGB4Q9UN71 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
PCDHGB4Q9UN71 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC25.35■■□□□ 1.65
PCDHGB4Q9UN71 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
PCDHGB4Q9UN71 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC25.34■■□□□ 1.65
PCDHGB4Q9UN71 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
PCDHGB4Q9UN71 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC25.33■■□□□ 1.65
PCDHGB4Q9UN71 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
PCDHGB4Q9UN71 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC25.32■■□□□ 1.64
PCDHGB4Q9UN71 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
PCDHGB4Q9UN71 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
PCDHGB4Q9UN71 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
PCDHGB4Q9UN71 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC25.31■■□□□ 1.64
PCDHGB4Q9UN71 KLF16-203ENST00000592313 508 ntTSL 3 BASIC25.31■■□□□ 1.64
PCDHGB4Q9UN71 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC25.31■■□□□ 1.64
PCDHGB4Q9UN71 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC25.3■■□□□ 1.64
PCDHGB4Q9UN71 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
PCDHGB4Q9UN71 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC25.3■■□□□ 1.64
PCDHGB4Q9UN71 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
PCDHGB4Q9UN71 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC25.3■■□□□ 1.64
PCDHGB4Q9UN71 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC25.3■■□□□ 1.64
PCDHGB4Q9UN71 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
PCDHGB4Q9UN71 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
PCDHGB4Q9UN71 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
PCDHGB4Q9UN71 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC25.28■■□□□ 1.64
PCDHGB4Q9UN71 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC25.27■■□□□ 1.64
PCDHGB4Q9UN71 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
PCDHGB4Q9UN71 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC25.25■■□□□ 1.63
PCDHGB4Q9UN71 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
PCDHGB4Q9UN71 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC25.25■■□□□ 1.63
PCDHGB4Q9UN71 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
PCDHGB4Q9UN71 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC25.25■■□□□ 1.63
PCDHGB4Q9UN71 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC25.24■■□□□ 1.63
PCDHGB4Q9UN71 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
PCDHGB4Q9UN71 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC25.23■■□□□ 1.63
PCDHGB4Q9UN71 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
PCDHGB4Q9UN71 ST7-AS1-201ENST00000456775 1889 ntBASIC25.23■■□□□ 1.63
PCDHGB4Q9UN71 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC25.22■■□□□ 1.63
PCDHGB4Q9UN71 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
PCDHGB4Q9UN71 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC25.22■■□□□ 1.63
PCDHGB4Q9UN71 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
PCDHGB4Q9UN71 AC135731.1-201ENST00000569415 2548 ntBASIC25.21■■□□□ 1.63
PCDHGB4Q9UN71 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC25.21■■□□□ 1.63
PCDHGB4Q9UN71 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
PCDHGB4Q9UN71 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
PCDHGB4Q9UN71 WASH5P-204ENST00000632292 975 ntBASIC25.2■■□□□ 1.62
PCDHGB4Q9UN71 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
PCDHGB4Q9UN71 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
PCDHGB4Q9UN71 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC25.18■■□□□ 1.62
PCDHGB4Q9UN71 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms