Protein–RNA interactions for Protein: Q9UN71

PCDHGB4, Protocadherin gamma-B4, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4Q9UN71 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC32.22■■■□□ 2.75
PCDHGB4Q9UN71 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC31.94■■■□□ 2.7
PCDHGB4Q9UN71 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
PCDHGB4Q9UN71 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC31.66■■■□□ 2.66
PCDHGB4Q9UN71 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC31.25■■■□□ 2.59
PCDHGB4Q9UN71 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC31.23■■■□□ 2.59
PCDHGB4Q9UN71 AL356512.1-201ENST00000607453 1739 ntBASIC31.21■■■□□ 2.59
PCDHGB4Q9UN71 HES6-203ENST00000409160 1600 ntTSL 2 BASIC31.1■■■□□ 2.57
PCDHGB4Q9UN71 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
PCDHGB4Q9UN71 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC31.04■■■□□ 2.56
PCDHGB4Q9UN71 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC30.76■■■□□ 2.52
PCDHGB4Q9UN71 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
PCDHGB4Q9UN71 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
PCDHGB4Q9UN71 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC30.5■■■□□ 2.47
PCDHGB4Q9UN71 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
PCDHGB4Q9UN71 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC30.3■■■□□ 2.44
PCDHGB4Q9UN71 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC30.23■■■□□ 2.43
PCDHGB4Q9UN71 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC30.21■■■□□ 2.43
PCDHGB4Q9UN71 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC30.06■■■□□ 2.4
PCDHGB4Q9UN71 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC30.04■■■□□ 2.4
PCDHGB4Q9UN71 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
PCDHGB4Q9UN71 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
PCDHGB4Q9UN71 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC29.82■■■□□ 2.36
PCDHGB4Q9UN71 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC29.78■■■□□ 2.36
PCDHGB4Q9UN71 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC29.71■■■□□ 2.35
PCDHGB4Q9UN71 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC29.62■■■□□ 2.33
PCDHGB4Q9UN71 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC29.55■■■□□ 2.32
PCDHGB4Q9UN71 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC29.37■■■□□ 2.29
PCDHGB4Q9UN71 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
PCDHGB4Q9UN71 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
PCDHGB4Q9UN71 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC29.16■■■□□ 2.26
PCDHGB4Q9UN71 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
PCDHGB4Q9UN71 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC29.12■■■□□ 2.25
PCDHGB4Q9UN71 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC29.09■■■□□ 2.25
PCDHGB4Q9UN71 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC29.06■■■□□ 2.24
PCDHGB4Q9UN71 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC29.01■■■□□ 2.24
PCDHGB4Q9UN71 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC29.01■■■□□ 2.23
PCDHGB4Q9UN71 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC28.99■■■□□ 2.23
PCDHGB4Q9UN71 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
PCDHGB4Q9UN71 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
PCDHGB4Q9UN71 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC28.92■■■□□ 2.22
PCDHGB4Q9UN71 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC28.91■■■□□ 2.22
PCDHGB4Q9UN71 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
PCDHGB4Q9UN71 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
PCDHGB4Q9UN71 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC28.81■■■□□ 2.2
PCDHGB4Q9UN71 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC28.8■■■□□ 2.2
PCDHGB4Q9UN71 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC28.79■■■□□ 2.2
PCDHGB4Q9UN71 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC28.74■■■□□ 2.19
PCDHGB4Q9UN71 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
PCDHGB4Q9UN71 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC28.71■■■□□ 2.19
PCDHGB4Q9UN71 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.18
PCDHGB4Q9UN71 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC28.58■■■□□ 2.17
PCDHGB4Q9UN71 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC28.56■■■□□ 2.16
PCDHGB4Q9UN71 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
PCDHGB4Q9UN71 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC28.51■■■□□ 2.15
PCDHGB4Q9UN71 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
PCDHGB4Q9UN71 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
PCDHGB4Q9UN71 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
PCDHGB4Q9UN71 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
PCDHGB4Q9UN71 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC28.33■■■□□ 2.13
PCDHGB4Q9UN71 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC28.3■■■□□ 2.12
PCDHGB4Q9UN71 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC28.29■■■□□ 2.12
PCDHGB4Q9UN71 ILK-212ENST00000532063 1617 ntTSL 2 BASIC28.29■■■□□ 2.12
PCDHGB4Q9UN71 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
PCDHGB4Q9UN71 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC28.25■■■□□ 2.11
PCDHGB4Q9UN71 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC28.24■■■□□ 2.11
PCDHGB4Q9UN71 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC28.23■■■□□ 2.11
PCDHGB4Q9UN71 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
PCDHGB4Q9UN71 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC28.19■■■□□ 2.1
PCDHGB4Q9UN71 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
PCDHGB4Q9UN71 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
PCDHGB4Q9UN71 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC28.16■■■□□ 2.1
PCDHGB4Q9UN71 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC28.12■■■□□ 2.09
PCDHGB4Q9UN71 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC28.1■■■□□ 2.09
PCDHGB4Q9UN71 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC28.09■■■□□ 2.09
PCDHGB4Q9UN71 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
PCDHGB4Q9UN71 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
PCDHGB4Q9UN71 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
PCDHGB4Q9UN71 ST7-205ENST00000393446 2114 ntTSL 5 BASIC27.96■■■□□ 2.07
PCDHGB4Q9UN71 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC27.94■■■□□ 2.06
PCDHGB4Q9UN71 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
PCDHGB4Q9UN71 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
PCDHGB4Q9UN71 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
PCDHGB4Q9UN71 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC27.85■■■□□ 2.05
PCDHGB4Q9UN71 ST7-202ENST00000323984 2142 ntTSL 5 BASIC27.85■■■□□ 2.05
PCDHGB4Q9UN71 ST7-207ENST00000393449 2127 ntTSL 5 BASIC27.85■■■□□ 2.05
PCDHGB4Q9UN71 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC27.85■■■□□ 2.05
PCDHGB4Q9UN71 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
PCDHGB4Q9UN71 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC27.79■■■□□ 2.04
PCDHGB4Q9UN71 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC27.79■■■□□ 2.04
PCDHGB4Q9UN71 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC27.79■■■□□ 2.04
PCDHGB4Q9UN71 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC27.78■■■□□ 2.04
PCDHGB4Q9UN71 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC27.77■■■□□ 2.04
PCDHGB4Q9UN71 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
PCDHGB4Q9UN71 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC27.71■■■□□ 2.03
PCDHGB4Q9UN71 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
PCDHGB4Q9UN71 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC27.69■■■□□ 2.02
PCDHGB4Q9UN71 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC27.66■■■□□ 2.02
PCDHGB4Q9UN71 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
PCDHGB4Q9UN71 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC27.66■■■□□ 2.02
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms