Protein–RNA interactions for Protein: Q8N5P1

ZC3H8, Zinc finger CCCH domain-containing protein 8, humanhuman

Known RBP eCLIP

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H8Q8N5P1 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.026e-6■■■■□ 24.9
ZC3H8Q8N5P1 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.356e-6■■■■□ 24.9
ZC3H8Q8N5P1 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC6.6□□□□□ -1.356e-6■■■■□ 24.9
ZC3H8Q8N5P1 CCT4-203ENST00000461540 638 ntTSL 34.19□□□□□ -1.746e-6■■■■□ 24.9
ZC3H8Q8N5P1 LDHA-207ENST00000460405 680 ntTSL 310.13□□□□□ -0.792e-7■■■■□ 24.7
ZC3H8Q8N5P1 LDHA-214ENST00000536528 516 ntTSL 36.91□□□□□ -1.32e-7■■■■□ 24.7
ZC3H8Q8N5P1 SNORD36A-201ENST00000362874 73 ntBASIC0.86□□□□□ -2.274e-7■■■■□ 24.5
ZC3H8Q8N5P1 SNORA12-201ENST00000391162 147 ntBASIC2.69□□□□□ -1.983e-23■■■■□ 24.5
ZC3H8Q8N5P1 SNHG19-201ENST00000563192 342 ntTSL 2 BASIC8.51□□□□□ -1.052e-11■■■■□ 24.2
ZC3H8Q8N5P1 snoR1.1-201ENST00000628177 80 ntBASIC-0.2□□□□□ -2.442e-11■■■■□ 24.2
ZC3H8Q8N5P1 SNORD60-201ENST00000383903 83 ntBASIC-1.31□□□□□ -2.622e-11■■■■□ 24.2
ZC3H8Q8N5P1 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC15.69■□□□□ 0.19e-7■■■■□ 23.4
ZC3H8Q8N5P1 PKN2-203ENST00000370521 6121 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.399e-7■■■■□ 23.4
ZC3H8Q8N5P1 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC6.1□□□□□ -1.439e-7■■■■□ 23.4
ZC3H8Q8N5P1 RCC1-210ENST00000434290 1070 ntTSL 513.56□□□□□ -0.242e-18■■■■□ 23.2
ZC3H8Q8N5P1 RCC1-207ENST00000427469 903 ntTSL 513.02□□□□□ -0.332e-18■■■■□ 23.2
ZC3H8Q8N5P1 RCC1-204ENST00000398958 2715 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.532e-18■■■■□ 23.2
ZC3H8Q8N5P1 SNHG3-202ENST00000437681 2614 ntTSL 2 BASIC11.34□□□□□ -0.592e-18■■■■□ 23.2
ZC3H8Q8N5P1 RCC1-203ENST00000373833 2844 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.662e-18■■■■□ 23.2
ZC3H8Q8N5P1 SNHG3-201ENST00000413987 2201 ntTSL 1 (best)10.12□□□□□ -0.792e-18■■■■□ 23.2
ZC3H8Q8N5P1 SNORA73A-201ENST00000364938 206 ntBASIC8.51□□□□□ -1.052e-18■■■■□ 23.2
ZC3H8Q8N5P1 SNHG3-203ENST00000447507 185 ntTSL 1 (best)1.41□□□□□ -2.182e-18■■■■□ 23.2
ZC3H8Q8N5P1 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.022e-6■■■■□ 22.9
ZC3H8Q8N5P1 LDHA-205ENST00000422447 2416 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.332e-6■■■■□ 22.9
ZC3H8Q8N5P1 LDHA-215ENST00000537296 1511 ntTSL 210.94□□□□□ -0.662e-6■■■■□ 22.9
ZC3H8Q8N5P1 LDHA-216ENST00000538451 1345 ntTSL 210.21□□□□□ -0.782e-6■■■■□ 22.9
ZC3H8Q8N5P1 LDHA-220ENST00000542179 1288 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.922e-6■■■■□ 22.9
ZC3H8Q8N5P1 LDHA-218ENST00000540430 2305 ntTSL 2 BASIC9.18□□□□□ -0.942e-6■■■■□ 22.9
ZC3H8Q8N5P1 LDHA-201ENST00000227157 1887 ntTSL 3 BASIC8.25□□□□□ -1.092e-6■■■■□ 22.9
ZC3H8Q8N5P1 LDHA-204ENST00000396222 1766 ntTSL 2 BASIC7.65□□□□□ -1.182e-6■■■■□ 22.9
ZC3H8Q8N5P1 LDHA-202ENST00000375710 2169 ntTSL 27.3□□□□□ -1.242e-6■■■■□ 22.9
ZC3H8Q8N5P1 LDHA-210ENST00000486690 664 ntTSL 57.2□□□□□ -1.262e-6■■■■□ 22.9
ZC3H8Q8N5P1 LDHA-206ENST00000430553 1310 ntTSL 2 BASIC7.08□□□□□ -1.282e-6■■■■□ 22.9
ZC3H8Q8N5P1 LDHA-219ENST00000541097 582 ntTSL 36.76□□□□□ -1.332e-6■■■■□ 22.9
ZC3H8Q8N5P1 LDHA-223ENST00000545215 1340 ntTSL 1 (best)6.32□□□□□ -1.42e-6■■■■□ 22.9
ZC3H8Q8N5P1 RPL3-207ENST00000459859 447 ntTSL 320.17■□□□□ 0.822e-12■■■■□ 22.9
ZC3H8Q8N5P1 RPL3-218ENST00000498462 669 ntTSL 318.57■□□□□ 0.562e-12■■■■□ 22.9
ZC3H8Q8N5P1 RPL3-208ENST00000460589 630 ntTSL 216.83■□□□□ 0.282e-12■■■■□ 22.9
ZC3H8Q8N5P1 RPL3-205ENST00000427905 782 ntTSL 514.1□□□□□ -0.152e-12■■■■□ 22.9
ZC3H8Q8N5P1 RPL3-206ENST00000453303 916 ntTSL 513.64□□□□□ -0.232e-12■■■■□ 22.9
ZC3H8Q8N5P1 RPL3-209ENST00000461967 767 ntTSL 213.04□□□□□ -0.322e-12■■■■□ 22.9
ZC3H8Q8N5P1 RPL3-217ENST00000484615 827 ntTSL 212.99□□□□□ -0.332e-12■■■■□ 22.9
ZC3H8Q8N5P1 RPL3-204ENST00000420536 711 ntTSL 59.19□□□□□ -0.942e-12■■■■□ 22.9
ZC3H8Q8N5P1 HSPA8-208ENST00000526686 740 ntTSL 1 (best)3.93□□□□□ -1.786e-11■■■■□ 22.8
ZC3H8Q8N5P1 GTF2A1-201ENST00000298173 1677 ntTSL 225■■□□□ 1.591e-12■■■■□ 22.4
ZC3H8Q8N5P1 GTF2A1-203ENST00000553612 6306 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.771e-12■■■■□ 22.4
ZC3H8Q8N5P1 GTF2A1-204ENST00000556268 864 ntTSL 58.73□□□□□ -1.011e-12■■■■□ 22.4
ZC3H8Q8N5P1 GTF2A1-202ENST00000434192 1199 ntTSL 1 (best) BASIC6.94□□□□□ -1.31e-12■■■■□ 22.4
ZC3H8Q8N5P1 SNORA79-201ENST00000408376 140 ntBASIC2.01□□□□□ -2.091e-12■■■■□ 22.4
ZC3H8Q8N5P1 DDX39B-206ENST00000419338 928 ntTSL 513.73□□□□□ -0.215e-12■■■■□ 22.4
ZC3H8Q8N5P1 DDX39B-219ENST00000481456 5158 ntTSL 212□□□□□ -0.495e-12■■■■□ 22.4
ZC3H8Q8N5P1 ATP6V1G2-DDX39B-201ENST00000376185 2039 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.495e-12■■■■□ 22.4
ZC3H8Q8N5P1 DDX39B-210ENST00000431908 914 ntTSL 511.8□□□□□ -0.525e-12■■■■□ 22.4
ZC3H8Q8N5P1 DDX39B-208ENST00000428098 817 ntTSL 311.53□□□□□ -0.565e-12■■■■□ 22.4
ZC3H8Q8N5P1 DDX39B-212ENST00000456662 932 ntTSL 511.53□□□□□ -0.565e-12■■■■□ 22.4
ZC3H8Q8N5P1 DDX39B-214ENST00000458640 2003 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.595e-12■■■■□ 22.4
ZC3H8Q8N5P1 DDX39B-220ENST00000482195 1232 ntTSL 210.25□□□□□ -0.775e-12■■■■□ 22.4
ZC3H8Q8N5P1 DDX39B-202ENST00000396172 2133 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.815e-12■■■■□ 22.4
ZC3H8Q8N5P1 DDX39B-215ENST00000462256 4027 ntTSL 29.72□□□□□ -0.855e-12■■■■□ 22.4
ZC3H8Q8N5P1 DDX39B-207ENST00000427214 1005 ntTSL 56.68□□□□□ -1.345e-12■■■■□ 22.4
ZC3H8Q8N5P1 NSD2-204ENST00000382891 7534 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.054e-18■■■■□ 22.1
ZC3H8Q8N5P1 NSD2-206ENST00000382895 7827 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.184e-18■■■■□ 22.1
ZC3H8Q8N5P1 NSD2-203ENST00000382888 2666 ntTSL 1 (best) BASIC13.89□□□□□ -0.194e-18■■■■□ 22.1
ZC3H8Q8N5P1 NSD2-210ENST00000482415 3602 ntTSL 1 (best)13.36□□□□□ -0.274e-18■■■■□ 22.1
ZC3H8Q8N5P1 NSD2-205ENST00000382892 7706 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.374e-18■■■■□ 22.1
ZC3H8Q8N5P1 NSD2-202ENST00000353275 7980 ntTSL 1 (best)12.15□□□□□ -0.464e-18■■■■□ 22.1
ZC3H8Q8N5P1 NSD2-201ENST00000312087 8050 ntTSL 1 (best)11.44□□□□□ -0.584e-18■■■■□ 22.1
ZC3H8Q8N5P1 NSD2-219ENST00000508803 4251 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.934e-18■■■■□ 22.1
ZC3H8Q8N5P1 SCARNA22-201ENST00000503991 125 ntBASIC4.76□□□□□ -1.654e-18■■■■□ 22.1
ZC3H8Q8N5P1 ATP5B-203ENST00000547808 705 ntTSL 518.97■□□□□ 0.638e-9■■■■□ 22.1
ZC3H8Q8N5P1 ATP5B-207ENST00000551020 856 ntTSL 318.92■□□□□ 0.628e-9■■■■□ 22.1
ZC3H8Q8N5P1 ATP5B-211ENST00000553007 814 ntTSL 518.92■□□□□ 0.628e-9■■■■□ 22.1
ZC3H8Q8N5P1 ATP5B-210ENST00000552959 1085 ntTSL 318.46■□□□□ 0.558e-9■■■■□ 22.1
ZC3H8Q8N5P1 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.168e-9■■■■□ 22.1
ZC3H8Q8N5P1 ATP5B-205ENST00000548647 682 ntTSL 515.97■□□□□ 0.158e-9■■■■□ 22.1
ZC3H8Q8N5P1 ATP5B-204ENST00000548474 449 ntTSL 36.31□□□□□ -1.48e-9■■■■□ 22.1
ZC3H8Q8N5P1 SNRPB-203ENST00000474384 985 ntTSL 518.36■□□□□ 0.533e-6■■■■□ 21.7
ZC3H8Q8N5P1 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.213e-6■■■■□ 21.7
ZC3H8Q8N5P1 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.213e-6■■■■□ 21.7
ZC3H8Q8N5P1 TAF1D-219ENST00000534079 656 ntTSL 26.25□□□□□ -1.413e-6■■■■□ 21.7
ZC3H8Q8N5P1 TAF1D-213ENST00000529900 1066 ntTSL 25.05□□□□□ -1.63e-6■■■■□ 21.7
ZC3H8Q8N5P1 RPL23A-208ENST00000580755 412 ntTSL 215.75■□□□□ 0.112e-6■■■■□ 21.3
ZC3H8Q8N5P1 SCARNA18.1-201ENST00000516330 83 ntBASIC5.92□□□□□ -1.466e-19■■■■□ 21.2
ZC3H8Q8N5P1 RNU6-9-201ENST00000384776 107 ntBASIC3.37□□□□□ -1.874e-9■■■■□ 21.2
ZC3H8Q8N5P1 EIF4G2-218ENST00000531416 1969 ntTSL 215.99■□□□□ 0.151e-73■■■■□ 21.1
ZC3H8Q8N5P1 EIF4G2-225ENST00000532383 6769 ntTSL 1 (best)10.46□□□□□ -0.731e-73■■■■□ 21.1
ZC3H8Q8N5P1 EIF4G2-201ENST00000339995 3978 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.761e-73■■■■□ 21.1
ZC3H8Q8N5P1 EIF4G2-232ENST00000640650 2724 ntAPPRIS P2 TSL 1 (best) BASIC9.66□□□□□ -0.861e-73■■■■□ 21.1
ZC3H8Q8N5P1 EIF4G2-202ENST00000396525 3346 ntAPPRIS ALT2 TSL 5 BASIC8.34□□□□□ -1.071e-73■■■■□ 21.1
ZC3H8Q8N5P1 EIF4G2-205ENST00000525681 3654 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.111e-73■■■■□ 21.1
ZC3H8Q8N5P1 EIF4G2-208ENST00000526148 4001 ntAPPRIS ALT2 TSL 1 (best) BASIC7.77□□□□□ -1.171e-73■■■■□ 21.1
ZC3H8Q8N5P1 EIF4G2-215ENST00000530564 849 ntTSL 26.94□□□□□ -1.31e-73■■■■□ 21.1
ZC3H8Q8N5P1 SNORD97-201ENST00000459187 142 ntBASIC3.97□□□□□ -1.771e-73■■■■□ 21.1
ZC3H8Q8N5P1 EIF4G2-222ENST00000532120 223 ntTSL 32.94□□□□□ -1.941e-73■■■■□ 21.1
ZC3H8Q8N5P1 GAS5-225ENST00000454813 621 ntTSL 36.11□□□□□ -1.437e-10■■■■□ 20.9
ZC3H8Q8N5P1 GAS5-207ENST00000422207 643 ntTSL 25.59□□□□□ -1.517e-10■■■■□ 20.9
ZC3H8Q8N5P1 GAS5-217ENST00000444470 424 ntTSL 25.59□□□□□ -1.517e-10■■■■□ 20.9
ZC3H8Q8N5P1 GAS5-212ENST00000434796 575 ntTSL 22.96□□□□□ -1.947e-10■■■■□ 20.9
ZC3H8Q8N5P1 RPL23A-207ENST00000578181 593 ntTSL 23.46□□□□□ -1.861e-6■■■■□ 20.8
ZC3H8Q8N5P1 EIF4A2-215ENST00000467585 570 ntTSL 213.13□□□□□ -0.312e-10■■■■□ 20.3
Retrieved 100 of 950 protein–RNA pairs in 18.8 ms