RNA–Protein interactions for RNA: ENST00000516330.1

SCARNA18.1-201, small Cajal body-specific RNA 18, humanhuman

BASIC

Gene SCARNA18, Length 83 nt, Biotype scaRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA18.1-201ENST00000516330 NISCHQ9Y2I1 1504 aa14.92□□□□□ -0.02
SCARNA18.1-201ENST00000516330 CCDC180Q9P1Z9 1646 aa13.45□□□□□ -0.26
SCARNA18.1-201ENST00000516330 ABCC9O60706 1549 aa12.99□□□□□ -0.33
SCARNA18.1-201ENST00000516330 RB1CC1Q8TDY2 1594 aa12.62□□□□□ -0.39
SCARNA18.1-201ENST00000516330 NACADO15069 1562 aa12.6□□□□□ -0.39
SCARNA18.1-201ENST00000516330 MYO15BQ96JP2 1530 aa12.57□□□□□ -0.4
SCARNA18.1-201ENST00000516330 DCAF1Q9Y4B6 1507 aa12.46□□□□□ -0.42
SCARNA18.1-201ENST00000516330 ZCCHC6Q5VYS8 1495 aaKnown RBP12.46□□□□□ -0.42
SCARNA18.1-201ENST00000516330 UNC13AQ9UPW8 1703 aa12.3□□□□□ -0.44
SCARNA18.1-201ENST00000516330 SHROOM4Q9ULL8 1493 aa12.26□□□□□ -0.45
SCARNA18.1-201ENST00000516330 DCAF8L2P0C7V8 631 aa12.2□□□□□ -0.46
SCARNA18.1-201ENST00000516330 BICRAQ9NZM4 1560 aa12.18□□□□□ -0.46
SCARNA18.1-201ENST00000516330 SCRIBQ14160 1630 aa12.09□□□□□ -0.47
SCARNA18.1-201ENST00000516330 PABPN1Q86U42 306 aaKnown RBP eCLIP12□□□□□ -0.49
SCARNA18.1-201ENST00000516330 EIF4G1Q04637 1599 aaKnown RBP11.9□□□□□ -0.5
SCARNA18.1-201ENST00000516330 DNAJC5BQ9UF47 199 aa11.86□□□□□ -0.51
SCARNA18.1-201ENST00000516330 CC2D2AQ9P2K1 1620 aa11.83□□□□□ -0.52
SCARNA18.1-201ENST00000516330 CECR2Q9BXF3 1484 aa11.75□□□□□ -0.53
SCARNA18.1-201ENST00000516330 SMARCA4P51532 1647 aa11.63□□□□□ -0.55
SCARNA18.1-201ENST00000516330 BAZ1AQ9NRL2 1556 aaPredicted RBP11.62□□□□□ -0.55
SCARNA18.1-201ENST00000516330 SMARCA2P51531 1590 aa11.6□□□□□ -0.55
SCARNA18.1-201ENST00000516330 HMGXB3Q12766 1538 aa11.6□□□□□ -0.55
SCARNA18.1-201ENST00000516330 PEG3Q9GZU2 1588 aa11.58□□□□□ -0.55
SCARNA18.1-201ENST00000516330 NCAPD3P42695 1498 aa11.57□□□□□ -0.56
SCARNA18.1-201ENST00000516330 ATAD2BQ9ULI0 1458 aa11.53□□□□□ -0.56
SCARNA18.1-201ENST00000516330 BAZ1BQ9UIG0 1483 aaKnown RBP11.45□□□□□ -0.58
SCARNA18.1-201ENST00000516330 MROH2BQ7Z745 1585 aa11.43□□□□□ -0.58
SCARNA18.1-201ENST00000516330 LAMC3Q9Y6N6 1575 aa11.35□□□□□ -0.59
SCARNA18.1-201ENST00000516330 WIZO95785 1651 aa11.31□□□□□ -0.6
SCARNA18.1-201ENST00000516330 CUX2O14529 1486 aa11.29□□□□□ -0.6
SCARNA18.1-201ENST00000516330 TOP2AP11388 1531 aaKnown RBP11.28□□□□□ -0.6
SCARNA18.1-201ENST00000516330 ERCC6Q03468 1493 aa11.27□□□□□ -0.6
SCARNA18.1-201ENST00000516330 RSF1Q96T23 1441 aaPredicted RBP11.26□□□□□ -0.61
SCARNA18.1-201ENST00000516330 THOC2Q8NI27 1593 aaKnown RBP11.22□□□□□ -0.61
SCARNA18.1-201ENST00000516330 NESP48681 1621 aa11.2□□□□□ -0.62
SCARNA18.1-201ENST00000516330 PDS5BQ9NTI5 1447 aa11.2□□□□□ -0.62
SCARNA18.1-201ENST00000516330 CADPSQ9ULU8 1353 aa11.18□□□□□ -0.62
SCARNA18.1-201ENST00000516330 KIF21AQ7Z4S6 1674 aa11.17□□□□□ -0.62
SCARNA18.1-201ENST00000516330 PRDM2Q13029 1718 aa11.17□□□□□ -0.62
SCARNA18.1-201ENST00000516330 CFTRP13569 1480 aa11.14□□□□□ -0.63
SCARNA18.1-201ENST00000516330 WDR62O43379 1518 aa11.12□□□□□ -0.63
SCARNA18.1-201ENST00000516330 MRC2Q9UBG0 1479 aa11.11□□□□□ -0.63
SCARNA18.1-201ENST00000516330 CEP164Q9UPV0 1460 aa11.11□□□□□ -0.63
SCARNA18.1-201ENST00000516330 FANCD2Q9BXW9 1451 aa11.07□□□□□ -0.64
SCARNA18.1-201ENST00000516330 CCDC88BA6NC98 1476 aa11.03□□□□□ -0.64
SCARNA18.1-201ENST00000516330 ABCC8Q09428 1581 aa10.95□□□□□ -0.66
SCARNA18.1-201ENST00000516330 URB2Q14146 1524 aaKnown RBP10.94□□□□□ -0.66
SCARNA18.1-201ENST00000516330 DNMBPQ6XZF7 1577 aa10.92□□□□□ -0.66
SCARNA18.1-201ENST00000516330 TOPBP1Q92547 1522 aa10.89□□□□□ -0.67
SCARNA18.1-201ENST00000516330 IFT140Q96RY7 1462 aa10.88□□□□□ -0.67
SCARNA18.1-201ENST00000516330 WDR97A6NE52 1622 aa10.87□□□□□ -0.67
SCARNA18.1-201ENST00000516330 DNAJC5Q9H3Z4 198 aa10.85□□□□□ -0.67
SCARNA18.1-201ENST00000516330 EIF4G3O43432 1585 aaKnown RBP10.82□□□□□ -0.68
SCARNA18.1-201ENST00000516330 TARBP1Q13395 1621 aaKnown RBP10.81□□□□□ -0.68
SCARNA18.1-201ENST00000516330 POLA1P09884 1462 aaPredicted RBP10.8□□□□□ -0.68
SCARNA18.1-201ENST00000516330 CUX1P39880 1505 aa10.75□□□□□ -0.69
SCARNA18.1-201ENST00000516330 FGD5Q6ZNL6 1462 aa10.74□□□□□ -0.69
SCARNA18.1-201ENST00000516330 ZNF608Q9ULD9 1512 aaPredicted RBP10.74□□□□□ -0.69
SCARNA18.1-201ENST00000516330 BIVM-ERCC5R4GMW8 1640 aa10.73□□□□□ -0.69
SCARNA18.1-201ENST00000516330 SUPT5HO00267 1087 aaKnown RBP10.71□□□□□ -0.69
SCARNA18.1-201ENST00000516330 TOP2BQ02880 1626 aa10.7□□□□□ -0.7
SCARNA18.1-201ENST00000516330 ABCA5Q8WWZ7 1642 aa10.69□□□□□ -0.7
SCARNA18.1-201ENST00000516330 ABCA10Q8WWZ4 1543 aa10.68□□□□□ -0.7
SCARNA18.1-201ENST00000516330 SOGA1O94964 1423 aa10.68□□□□□ -0.7
SCARNA18.1-201ENST00000516330 MAGI1Q96QZ7 1491 aaPredicted RBP10.68□□□□□ -0.7
SCARNA18.1-201ENST00000516330 WRNQ14191 1432 aaPredicted RBP eCLIP10.67□□□□□ -0.7
SCARNA18.1-201ENST00000516330 PBRM1Q86U86 1689 aa10.66□□□□□ -0.7
SCARNA18.1-201ENST00000516330 CHD1O14646 1710 aa10.66□□□□□ -0.7
SCARNA18.1-201ENST00000516330 GRIN2BQ13224 1484 aa10.65□□□□□ -0.7
SCARNA18.1-201ENST00000516330 RAD54L2Q9Y4B4 1467 aa10.65□□□□□ -0.7
SCARNA18.1-201ENST00000516330 SYNJ1O43426 1573 aa10.64□□□□□ -0.71
SCARNA18.1-201ENST00000516330 AQRO60306 1485 aaKnown RBP eCLIP10.62□□□□□ -0.71
SCARNA18.1-201ENST00000516330 SNAPC4Q5SXM2 1469 aa10.62□□□□□ -0.71
SCARNA18.1-201ENST00000516330 OSCARQ8IYS5 282 aa10.62□□□□□ -0.71
SCARNA18.1-201ENST00000516330 SYNJ2O15056 1496 aa10.61□□□□□ -0.71
SCARNA18.1-201ENST00000516330 GAPVD1Q14C86 1478 aa10.61□□□□□ -0.71
SCARNA18.1-201ENST00000516330 ERICH3Q5RHP9 1530 aa10.58□□□□□ -0.72
SCARNA18.1-201ENST00000516330 ADAMTS12P58397 1594 aa10.58□□□□□ -0.72
SCARNA18.1-201ENST00000516330 TDRD9Q8NDG6 1382 aaKnown RBP10.58□□□□□ -0.72
SCARNA18.1-201ENST00000516330 CLASP1Q7Z460 1538 aa10.58□□□□□ -0.72
SCARNA18.1-201ENST00000516330 ARHGEF11O15085 1522 aa10.57□□□□□ -0.72
SCARNA18.1-201ENST00000516330 RIMBP3CA6NJZ7 1639 aa10.56□□□□□ -0.72
SCARNA18.1-201ENST00000516330 RIMBP3BA6NNM3 1639 aa10.56□□□□□ -0.72
SCARNA18.1-201ENST00000516330 RIMBP3Q9UFD9 1639 aa10.56□□□□□ -0.72
SCARNA18.1-201ENST00000516330 GRIN2AQ12879 1464 aa10.52□□□□□ -0.73
SCARNA18.1-201ENST00000516330 CUL7Q14999 1698 aa10.5□□□□□ -0.73
SCARNA18.1-201ENST00000516330 FHAD1B1AJZ9 1412 aa10.5□□□□□ -0.73
SCARNA18.1-201ENST00000516330 NUP160Q12769 1436 aa10.48□□□□□ -0.73
SCARNA18.1-201ENST00000516330 CHMP7Q8WUX9 453 aaPredicted RBP10.47□□□□□ -0.73
SCARNA18.1-201ENST00000516330 CEP170Q5SW79 1584 aa10.46□□□□□ -0.74
SCARNA18.1-201ENST00000516330 SHROOM2Q13796 1616 aa10.46□□□□□ -0.74
SCARNA18.1-201ENST00000516330 ARAP1Q96P48 1450 aa10.45□□□□□ -0.74
SCARNA18.1-201ENST00000516330 KIF27Q86VH2 1401 aa10.45□□□□□ -0.74
SCARNA18.1-201ENST00000516330 RUSC2Q8N2Y8 1516 aa10.44□□□□□ -0.74
SCARNA18.1-201ENST00000516330 FBLN2P98095 1184 aa10.44□□□□□ -0.74
SCARNA18.1-201ENST00000516330 TRIM41Q8WV44 630 aa10.36□□□□□ -0.75
SCARNA18.1-201ENST00000516330 KIAA0586Q9BVV6 1533 aa10.34□□□□□ -0.75
SCARNA18.1-201ENST00000516330 IGF1RP08069 1367 aa10.33□□□□□ -0.76
SCARNA18.1-201ENST00000516330 IQGAP2Q13576 1575 aa10.31□□□□□ -0.76
SCARNA18.1-201ENST00000516330 ERCC6L2Q5T890 1561 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms