RNA–Protein interactions for RNA: ENST00000316005.11

PKN2-201, Transcript of protein kinase N2, humanhuman

TSL 5 BASIC

Gene PKN2, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKN2-201ENST00000316005 NISCHQ9Y2I1 1504 aa32.14■■■□□ 2.74
PKN2-201ENST00000316005 CCDC180Q9P1Z9 1646 aa27.61■■■□□ 2.01
PKN2-201ENST00000316005 SHROOM4Q9ULL8 1493 aa27.48■■□□□ 1.99
PKN2-201ENST00000316005 ZCCHC6Q5VYS8 1495 aaKnown RBP27.13■■□□□ 1.93
PKN2-201ENST00000316005 DCAF8L2P0C7V8 631 aa26.95■■□□□ 1.9
PKN2-201ENST00000316005 SUPT5HO00267 1087 aaKnown RBP26.81■■□□□ 1.88
PKN2-201ENST00000316005 ABCC9O60706 1549 aa26.3■■□□□ 1.8
PKN2-201ENST00000316005 DCAF1Q9Y4B6 1507 aa26.24■■□□□ 1.79
PKN2-201ENST00000316005 CHIC1Q5VXU3 224 aa25.87■■□□□ 1.73
PKN2-201ENST00000316005 MYO15BQ96JP2 1530 aa25.78■■□□□ 1.72
PKN2-201ENST00000316005 SCRIBQ14160 1630 aa25.77■■□□□ 1.72
PKN2-201ENST00000316005 NACADO15069 1562 aa25.72■■□□□ 1.71
PKN2-201ENST00000316005 RB1CC1Q8TDY2 1594 aa25.51■■□□□ 1.67
PKN2-201ENST00000316005 RSF1Q96T23 1441 aaPredicted RBP25.4■■□□□ 1.66
PKN2-201ENST00000316005 LOC105371045A0A1W2PR82 267 aa25.21■■□□□ 1.63
PKN2-201ENST00000316005 CECR2Q9BXF3 1484 aa25.21■■□□□ 1.63
PKN2-201ENST00000316005 UNC13AQ9UPW8 1703 aa25.12■■□□□ 1.61
PKN2-201ENST00000316005 MROH2BQ7Z745 1585 aa25.05■■□□□ 1.6
PKN2-201ENST00000316005 PABPN1Q86U42 306 aaKnown RBP eCLIP24.97■■□□□ 1.59
PKN2-201ENST00000316005 WIZO95785 1651 aa24.92■■□□□ 1.58
PKN2-201ENST00000316005 PCGF6Q9BYE7 350 aa24.91■■□□□ 1.58
PKN2-201ENST00000316005 TRIM41Q8WV44 630 aa24.89■■□□□ 1.58
PKN2-201ENST00000316005 FAM9AQ8IZU1 332 aaPredicted RBP24.83■■□□□ 1.57
PKN2-201ENST00000316005 BICRAQ9NZM4 1560 aa24.8■■□□□ 1.56
PKN2-201ENST00000316005 EHMT2Q96KQ7 1210 aa24.73■■□□□ 1.55
PKN2-201ENST00000316005 BAZ1AQ9NRL2 1556 aaPredicted RBP24.67■■□□□ 1.54
PKN2-201ENST00000316005 HRCP23327 699 aa24.64■■□□□ 1.54
PKN2-201ENST00000316005 SMARCA4P51532 1647 aa24.54■■□□□ 1.52
PKN2-201ENST00000316005 TOP2AP11388 1531 aaKnown RBP24.42■■□□□ 1.5
PKN2-201ENST00000316005 EIF4G1Q04637 1599 aaKnown RBP24.4■■□□□ 1.5
PKN2-201ENST00000316005 CCDC88BA6NC98 1476 aa24.39■■□□□ 1.49
PKN2-201ENST00000316005 PPARGC1BQ86YN6 1023 aaKnown RBP24.37■■□□□ 1.49
PKN2-201ENST00000316005 TRIM26Q12899 539 aaPredicted RBP24.34■■□□□ 1.49
PKN2-201ENST00000316005 SMARCA2P51531 1590 aa24.33■■□□□ 1.48
PKN2-201ENST00000316005 ABCC8Q09428 1581 aa24.33■■□□□ 1.48
PKN2-201ENST00000316005 ATAD2BQ9ULI0 1458 aa24.09■■□□□ 1.45
PKN2-201ENST00000316005 PEG3Q9GZU2 1588 aa24.08■■□□□ 1.45
PKN2-201ENST00000316005 SOGA1O94964 1423 aa24.05■■□□□ 1.44
PKN2-201ENST00000316005 BAZ1BQ9UIG0 1483 aaKnown RBP24■■□□□ 1.43
PKN2-201ENST00000316005 RUSC2Q8N2Y8 1516 aa23.98■■□□□ 1.43
PKN2-201ENST00000316005 TTBK1Q5TCY1 1321 aaPredicted RBP23.86■■□□□ 1.41
PKN2-201ENST00000316005 WRNQ14191 1432 aaPredicted RBP eCLIP23.85■■□□□ 1.41
PKN2-201ENST00000316005 CSRNP3Q8WYN3 585 aa23.82■■□□□ 1.4
PKN2-201ENST00000316005 SYNJ1O43426 1573 aa23.78■■□□□ 1.4
PKN2-201ENST00000316005 UBTFP17480 764 aaKnown RBP23.78■■□□□ 1.4
PKN2-201ENST00000316005 NCAPD3P42695 1498 aa23.77■■□□□ 1.4
PKN2-201ENST00000316005 CEP162Q5TB80 1403 aa23.77■■□□□ 1.4
PKN2-201ENST00000316005 HMGXB3Q12766 1538 aa23.71■■□□□ 1.39
PKN2-201ENST00000316005 CC2D2AQ9P2K1 1620 aa23.69■■□□□ 1.38
PKN2-201ENST00000316005 TNIKQ9UKE5 1360 aa23.68■■□□□ 1.38
PKN2-201ENST00000316005 EEA1Q15075 1411 aa23.67■■□□□ 1.38
PKN2-201ENST00000316005 GOLGA3Q08378 1498 aa23.59■■□□□ 1.37
PKN2-201ENST00000316005 ZEB1P37275 1124 aaPredicted RBP23.59■■□□□ 1.37
PKN2-201ENST00000316005 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.59■■□□□ 1.37
PKN2-201ENST00000316005 RANGAP1P46060 587 aaPredicted RBP23.52■■□□□ 1.36
PKN2-201ENST00000316005 CEP164Q9UPV0 1460 aa23.47■■□□□ 1.35
PKN2-201ENST00000316005 RAPGEF2Q9Y4G8 1499 aa23.44■■□□□ 1.34
PKN2-201ENST00000316005 TOP2BQ02880 1626 aa23.42■■□□□ 1.34
PKN2-201ENST00000316005 CCER1Q8TC90 406 aaPredicted RBP23.42■■□□□ 1.34
PKN2-201ENST00000316005 KIF21BO75037 1637 aa23.41■■□□□ 1.34
PKN2-201ENST00000316005 CLIP1P30622 1438 aa23.37■■□□□ 1.33
PKN2-201ENST00000316005 CFTRP13569 1480 aa23.34■■□□□ 1.33
PKN2-201ENST00000316005 BIVM-ERCC5R4GMW8 1640 aa23.32■■□□□ 1.32
PKN2-201ENST00000316005 CUX1P39880 1505 aa23.32■■□□□ 1.32
PKN2-201ENST00000316005 DNAJC5BQ9UF47 199 aa23.3■■□□□ 1.32
PKN2-201ENST00000316005 CADPSQ9ULU8 1353 aa23.26■■□□□ 1.31
PKN2-201ENST00000316005 VPS8Q8N3P4 1428 aa23.2■■□□□ 1.3
PKN2-201ENST00000316005 PRDM2Q13029 1718 aa23.18■■□□□ 1.3
PKN2-201ENST00000316005 HNRNPUL2Q1KMD3 747 aaKnown RBP23.17■■□□□ 1.3
PKN2-201ENST00000316005 NESP48681 1621 aa23.16■■□□□ 1.3
PKN2-201ENST00000316005 PRXQ9BXM0 1461 aa23.16■■□□□ 1.3
PKN2-201ENST00000316005 APLP2Q06481 763 aa23.11■■□□□ 1.29
PKN2-201ENST00000316005 KIF27Q86VH2 1401 aa23.1■■□□□ 1.29
PKN2-201ENST00000316005 ERICH3Q5RHP9 1530 aa23.06■■□□□ 1.28
PKN2-201ENST00000316005 FANCD2Q9BXW9 1451 aa23.05■■□□□ 1.28
PKN2-201ENST00000316005 ARAP1Q96P48 1450 aa23.02■■□□□ 1.28
PKN2-201ENST00000316005 CUX2O14529 1486 aa23■■□□□ 1.27
PKN2-201ENST00000316005 KANK4Q5T7N3 995 aaPredicted RBP22.96■■□□□ 1.27
PKN2-201ENST00000316005 FGD5Q6ZNL6 1462 aa22.94■■□□□ 1.26
PKN2-201ENST00000316005 LAMC3Q9Y6N6 1575 aa22.92■■□□□ 1.26
PKN2-201ENST00000316005 IGF1RP08069 1367 aa22.92■■□□□ 1.26
PKN2-201ENST00000316005 ARHGAP35Q9NRY4 1499 aa22.87■■□□□ 1.25
PKN2-201ENST00000316005 CARMIL1Q5VZK9 1371 aa22.82■■□□□ 1.24
PKN2-201ENST00000316005 DIEXFQ68CQ4 756 aaKnown RBP22.8■■□□□ 1.24
PKN2-201ENST00000316005 PDS5BQ9NTI5 1447 aa22.8■■□□□ 1.24
PKN2-201ENST00000316005 RAD54L2Q9Y4B4 1467 aa22.8■■□□□ 1.24
PKN2-201ENST00000316005 TOPBP1Q92547 1522 aa22.8■■□□□ 1.24
PKN2-201ENST00000316005 KIF21AQ7Z4S6 1674 aa22.8■■□□□ 1.24
PKN2-201ENST00000316005 DNMBPQ6XZF7 1577 aa22.79■■□□□ 1.24
PKN2-201ENST00000316005 URB2Q14146 1524 aaKnown RBP22.75■■□□□ 1.23
PKN2-201ENST00000316005 P3H3Q8IVL6 736 aa22.74■■□□□ 1.23
PKN2-201ENST00000316005 POLA1P09884 1462 aaPredicted RBP22.72■■□□□ 1.23
PKN2-201ENST00000316005 ITGAEP38570 1179 aa22.69■■□□□ 1.22
PKN2-201ENST00000316005 ZNF316A6NFI3 1004 aaPredicted RBP22.66■■□□□ 1.22
PKN2-201ENST00000316005 SCAF1Q9H7N4 1312 aaKnown RBP22.63■■□□□ 1.21
PKN2-201ENST00000316005 ATP1B4Q9UN42 357 aaPredicted RBP22.61■■□□□ 1.21
PKN2-201ENST00000316005 RRBP1Q9P2E9 1410 aaKnown RBP22.6■■□□□ 1.21
PKN2-201ENST00000316005 ABCA10Q8WWZ4 1543 aa22.59■■□□□ 1.21
PKN2-201ENST00000316005 DHX57Q6P158 1386 aaKnown RBP22.58■■□□□ 1.2
PKN2-201ENST00000316005 CCNB3Q8WWL7 1395 aa22.57■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms