RNA–Protein interactions for RNA: ENST00000461540.2

CCT4-203, Transcript of chaperonin containing TCP1 subunit 4, humanhuman

TSL 3

Gene CCT4, Length 638 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT4-203ENST00000461540 AEBP2Q6ZN18 517 aaPredicted RBP30.31■■■□□ 2.44
CCT4-203ENST00000461540 CHIC1Q5VXU3 224 aa28.43■■■□□ 2.14
CCT4-203ENST00000461540 SENP3Q9H4L4 574 aaPredicted RBP26.06■■□□□ 1.76
CCT4-203ENST00000461540 PHF23Q9BUL5 403 aaPredicted RBP25.6■■□□□ 1.69
CCT4-203ENST00000461540 FOXD1Q16676 465 aa24.32■■□□□ 1.48
CCT4-203ENST00000461540 POTEDQ86YR6 584 aa23.63■■□□□ 1.37
CCT4-203ENST00000461540 MSH5O43196 834 aa23.09■■□□□ 1.29
CCT4-203ENST00000461540 PIAS4Q8N2W9 510 aaPredicted RBP22.62■■□□□ 1.21
CCT4-203ENST00000461540 PLPPR3Q6T4P5 718 aa22.26■■□□□ 1.15
CCT4-203ENST00000461540 PPP6R1Q9UPN7 881 aa22.19■■□□□ 1.14
CCT4-203ENST00000461540 ADRA2BP18089 450 aa22.11■■□□□ 1.13
CCT4-203ENST00000461540 DMRT2Q9Y5R5 561 aa20.52■□□□□ 0.88
CCT4-203ENST00000461540 MAPK8IP2Q13387 824 aaPredicted RBP20.5■□□□□ 0.87
CCT4-203ENST00000461540 SCAF1Q9H7N4 1312 aaKnown RBP20.32■□□□□ 0.84
CCT4-203ENST00000461540 CACNB1Q02641 598 aaPredicted RBP20.24■□□□□ 0.83
CCT4-203ENST00000461540 DCAF8L1A6NGE4 600 aa19.81■□□□□ 0.76
CCT4-203ENST00000461540 RNF39Q9H2S5 420 aa19.59■□□□□ 0.73
CCT4-203ENST00000461540 HOXD11P31277 338 aaPredicted RBP19.49■□□□□ 0.71
CCT4-203ENST00000461540 PPP4R3CPQ6ZMV5 832 aa19.4■□□□□ 0.7
CCT4-203ENST00000461540 C1QBPQ07021 282 aaKnown RBP19.31■□□□□ 0.68
CCT4-203ENST00000461540 CNKSR2Q8WXI2 1034 aa19.21■□□□□ 0.67
CCT4-203ENST00000461540 RNF216Q9NWF9 866 aaPredicted RBP19.19■□□□□ 0.66
CCT4-203ENST00000461540 DNAJC5BQ9UF47 199 aa18.97■□□□□ 0.63
CCT4-203ENST00000461540 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.65■□□□□ 0.58
CCT4-203ENST00000461540 NCBP3Q53F19 620 aaKnown RBP18.51■□□□□ 0.55
CCT4-203ENST00000461540 POTEHQ6S545 545 aa18.42■□□□□ 0.54
CCT4-203ENST00000461540 NPM3O75607 178 aaKnown RBP18.16■□□□□ 0.5
CCT4-203ENST00000461540 CAPN15O75808 1086 aa18.13■□□□□ 0.49
CCT4-203ENST00000461540 DSG3P32926 999 aa18.11■□□□□ 0.49
CCT4-203ENST00000461540 U3KPZ7 1027 aaPredicted RBP18.11■□□□□ 0.49
CCT4-203ENST00000461540 SPINK5Q9NQ38 1064 aaPredicted RBP18.05■□□□□ 0.48
CCT4-203ENST00000461540 TRHP20396 242 aaPredicted RBP17.67■□□□□ 0.42
CCT4-203ENST00000461540 APLP2Q06481 763 aa17.64■□□□□ 0.41
CCT4-203ENST00000461540 ABCB7O75027 752 aa17.62■□□□□ 0.41
CCT4-203ENST00000461540 ZNF219Q9P2Y4 722 aaPredicted RBP17.61■□□□□ 0.41
CCT4-203ENST00000461540 SLC4A2P04920 1241 aa17.49■□□□□ 0.39
CCT4-203ENST00000461540 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.45■□□□□ 0.38
CCT4-203ENST00000461540 HNRNPUL2Q1KMD3 747 aaKnown RBP17.45■□□□□ 0.38
CCT4-203ENST00000461540 RBM42Q9BTD8 480 aaKnown RBP17.37■□□□□ 0.37
CCT4-203ENST00000461540 SAMD1Q6SPF0 538 aaPredicted RBP17.3■□□□□ 0.36
CCT4-203ENST00000461540 CHRDL2Q6WN34 429 aa17.23■□□□□ 0.35
CCT4-203ENST00000461540 KCNA4P22459 653 aa17.21■□□□□ 0.35
CCT4-203ENST00000461540 POLA2Q14181 598 aa17.02■□□□□ 0.32
CCT4-203ENST00000461540 SP7Q8TDD2 431 aaPredicted RBP16.94■□□□□ 0.3
CCT4-203ENST00000461540 MYCNP04198 464 aaPredicted RBP16.85■□□□□ 0.29
CCT4-203ENST00000461540 AKT1S1Q96B36 256 aa16.8■□□□□ 0.28
CCT4-203ENST00000461540 ZBTB12Q9Y330 459 aaPredicted RBP16.66■□□□□ 0.26
CCT4-203ENST00000461540 PIP4P2Q8N4L2 257 aa16.65■□□□□ 0.26
CCT4-203ENST00000461540 REM2Q8IYK8 340 aaPredicted RBP16.62■□□□□ 0.25
CCT4-203ENST00000461540 HAX1O00165 279 aa16.59■□□□□ 0.25
CCT4-203ENST00000461540 OSCARQ8IYS5 282 aa16.48■□□□□ 0.23
CCT4-203ENST00000461540 PITPNM1O00562 1244 aa16.45■□□□□ 0.22
CCT4-203ENST00000461540 ATF5Q9Y2D1 282 aaPredicted RBP16.45■□□□□ 0.22
CCT4-203ENST00000461540 FXR2P51116 673 aaKnown RBP eCLIP16.43■□□□□ 0.22
CCT4-203ENST00000461540 FOXD4L1Q9NU39 408 aa16.31■□□□□ 0.2
CCT4-203ENST00000461540 EVX2Q03828 476 aa16.23■□□□□ 0.19
CCT4-203ENST00000461540 SLC4A1APQ9BWU0 796 aaKnown RBP16.15■□□□□ 0.18
CCT4-203ENST00000461540 SPDYE2BA6NHP3 402 aa16.06■□□□□ 0.16
CCT4-203ENST00000461540 SPDYE6P0CI01 402 aa16.06■□□□□ 0.16
CCT4-203ENST00000461540 SPDYE2Q495Y8 402 aa16.06■□□□□ 0.16
CCT4-203ENST00000461540 PRKAR2AP13861 404 aaKnown RBP16.05■□□□□ 0.16
CCT4-203ENST00000461540 CLEC11AQ9Y240 323 aa15.99■□□□□ 0.15
CCT4-203ENST00000461540 FBLN2P98095 1184 aa15.96■□□□□ 0.15
CCT4-203ENST00000461540 SPDYE1Q8NFV5 336 aaPredicted RBP15.96■□□□□ 0.15
CCT4-203ENST00000461540 C19orf67A6NJJ6 358 aa15.93■□□□□ 0.14
CCT4-203ENST00000461540 LHX8Q68G74 356 aa15.89■□□□□ 0.13
CCT4-203ENST00000461540 GABBR2O75899 941 aa15.88■□□□□ 0.13
CCT4-203ENST00000461540 ATXN8OSP0DMR3 200 aa15.87■□□□□ 0.13
CCT4-203ENST00000461540 ZBTB22O15209 634 aa15.77■□□□□ 0.12
CCT4-203ENST00000461540 ZNF692Q9BU19 519 aaPredicted RBP15.77■□□□□ 0.12
CCT4-203ENST00000461540 SSUH2Q9Y2M2 353 aa15.72■□□□□ 0.11
CCT4-203ENST00000461540 CHADLQ6NUI6 762 aa15.7■□□□□ 0.1
CCT4-203ENST00000461540 MKRN4PQ13434 485 aaPredicted RBP15.66■□□□□ 0.1
CCT4-203ENST00000461540 PRR29P0C7W0 189 aa15.62■□□□□ 0.09
CCT4-203ENST00000461540 CD44P16070 742 aaKnown RBP15.5■□□□□ 0.07
CCT4-203ENST00000461540 POTEIP0CG38 1075 aa15.49■□□□□ 0.07
CCT4-203ENST00000461540 PABPN1Q86U42 306 aaKnown RBP eCLIP15.49■□□□□ 0.07
CCT4-203ENST00000461540 PLSCR2Q9NRY7 297 aa15.49■□□□□ 0.07
CCT4-203ENST00000461540 CLCN6P51797 869 aa15.45■□□□□ 0.06
CCT4-203ENST00000461540 FARP1Q9Y4F1 1045 aaPredicted RBP15.41■□□□□ 0.06
CCT4-203ENST00000461540 DCBLD2Q96PD2 775 aa15.38■□□□□ 0.05
CCT4-203ENST00000461540 ZNF579Q8NAF0 562 aaKnown RBP15.2■□□□□ 0.02
CCT4-203ENST00000461540 ZRANB1Q9UGI0 708 aa15.19■□□□□ 0.02
CCT4-203ENST00000461540 OTUD5Q96G74 571 aa15.08■□□□□ 0
CCT4-203ENST00000461540 GALR2O43603 387 aaPredicted RBP15.06■□□□□ 0
CCT4-203ENST00000461540 POTEMA6NI47 508 aa15□□□□□ -0.01
CCT4-203ENST00000461540 CREBZFQ9NS37 354 aa15□□□□□ -0.01
CCT4-203ENST00000461540 POTEB2H3BUK9 544 aa14.97□□□□□ -0.01
CCT4-203ENST00000461540 PAK3O75914 559 aaPredicted RBP14.97□□□□□ -0.01
CCT4-203ENST00000461540 STAG3Q9UJ98 1225 aa14.97□□□□□ -0.01
CCT4-203ENST00000461540 POTEGQ6S5H5 508 aa14.94□□□□□ -0.02
CCT4-203ENST00000461540 PHF12Q96QT6 1004 aa14.88□□□□□ -0.03
CCT4-203ENST00000461540 PCDH10Q9P2E7 1040 aa14.82□□□□□ -0.04
CCT4-203ENST00000461540 PELP1Q8IZL8 1130 aaKnown RBP14.8□□□□□ -0.04
CCT4-203ENST00000461540 NPM1P06748 294 aaKnown RBP eCLIP14.79□□□□□ -0.04
CCT4-203ENST00000461540 METRNQ9UJH8 293 aa14.75□□□□□ -0.05
CCT4-203ENST00000461540 SLC39A7Q92504 469 aa14.72□□□□□ -0.05
CCT4-203ENST00000461540 MAMSTRQ6ZN01 415 aa14.71□□□□□ -0.05
CCT4-203ENST00000461540 C7P10643 843 aa14.7□□□□□ -0.06
CCT4-203ENST00000461540 ASTLQ6HA08 431 aaPredicted RBP14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms