RNA–Protein interactions for RNA: ENST00000486690.6

LDHA-210, Transcript of lactate dehydrogenase A, humanhuman

TSL 5

Gene LDHA, Length 664 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-210ENST00000486690 AEBP2Q6ZN18 517 aaPredicted RBP21.71■■□□□ 1.07
LDHA-210ENST00000486690 CHIC1Q5VXU3 224 aa21.16■□□□□ 0.98
LDHA-210ENST00000486690 PHF23Q9BUL5 403 aaPredicted RBP18.56■□□□□ 0.56
LDHA-210ENST00000486690 NISCHQ9Y2I1 1504 aa18.53■□□□□ 0.56
LDHA-210ENST00000486690 SENP3Q9H4L4 574 aaPredicted RBP18.51■□□□□ 0.55
LDHA-210ENST00000486690 POTEDQ86YR6 584 aa17.58■□□□□ 0.4
LDHA-210ENST00000486690 PLPPR3Q6T4P5 718 aa17.16■□□□□ 0.34
LDHA-210ENST00000486690 FOXD1Q16676 465 aa17.15■□□□□ 0.34
LDHA-210ENST00000486690 CCDC180Q9P1Z9 1646 aa16.65■□□□□ 0.26
LDHA-210ENST00000486690 ABCC9O60706 1549 aa16.58■□□□□ 0.24
LDHA-210ENST00000486690 PPP6R1Q9UPN7 881 aa16.41■□□□□ 0.22
LDHA-210ENST00000486690 ADRA2BP18089 450 aa16.38■□□□□ 0.21
LDHA-210ENST00000486690 MSH5O43196 834 aa16.33■□□□□ 0.2
LDHA-210ENST00000486690 PIAS4Q8N2W9 510 aaPredicted RBP16.15■□□□□ 0.18
LDHA-210ENST00000486690 RB1CC1Q8TDY2 1594 aa15.81■□□□□ 0.12
LDHA-210ENST00000486690 NACADO15069 1562 aa15.73■□□□□ 0.11
LDHA-210ENST00000486690 DNAJC5BQ9UF47 199 aa15.65■□□□□ 0.1
LDHA-210ENST00000486690 MYO15BQ96JP2 1530 aa15.56■□□□□ 0.08
LDHA-210ENST00000486690 UNC13AQ9UPW8 1703 aa15.54■□□□□ 0.08
LDHA-210ENST00000486690 DCAF8L2P0C7V8 631 aa15.52■□□□□ 0.08
LDHA-210ENST00000486690 PABPN1Q86U42 306 aaKnown RBP eCLIP15.43■□□□□ 0.06
LDHA-210ENST00000486690 BICRAQ9NZM4 1560 aa15.42■□□□□ 0.06
LDHA-210ENST00000486690 ZCCHC6Q5VYS8 1495 aaKnown RBP15.34■□□□□ 0.05
LDHA-210ENST00000486690 DCAF1Q9Y4B6 1507 aa15.34■□□□□ 0.05
LDHA-210ENST00000486690 SHROOM4Q9ULL8 1493 aa15.18■□□□□ 0.02
LDHA-210ENST00000486690 SCAF1Q9H7N4 1312 aaKnown RBP15.09■□□□□ 0.01
LDHA-210ENST00000486690 SCRIBQ14160 1630 aa15.08■□□□□ 0
LDHA-210ENST00000486690 PPP4R3CPQ6ZMV5 832 aa15.08■□□□□ 0
LDHA-210ENST00000486690 CC2D2AQ9P2K1 1620 aa15.02□□□□□ -0.01
LDHA-210ENST00000486690 EIF4G1Q04637 1599 aaKnown RBP14.99□□□□□ -0.01
LDHA-210ENST00000486690 CECR2Q9BXF3 1484 aa14.95□□□□□ -0.02
LDHA-210ENST00000486690 MAPK8IP2Q13387 824 aaPredicted RBP14.9□□□□□ -0.02
LDHA-210ENST00000486690 DMRT2Q9Y5R5 561 aa14.74□□□□□ -0.05
LDHA-210ENST00000486690 CNKSR2Q8WXI2 1034 aa14.71□□□□□ -0.05
LDHA-210ENST00000486690 NCBP3Q53F19 620 aaKnown RBP14.7□□□□□ -0.06
LDHA-210ENST00000486690 KCNA4P22459 653 aa14.57□□□□□ -0.08
LDHA-210ENST00000486690 CACNB1Q02641 598 aaPredicted RBP14.57□□□□□ -0.08
LDHA-210ENST00000486690 NCAPD3P42695 1498 aa14.55□□□□□ -0.08
LDHA-210ENST00000486690 DNAJC5Q9H3Z4 198 aa14.49□□□□□ -0.09
LDHA-210ENST00000486690 ATAD2BQ9ULI0 1458 aa14.47□□□□□ -0.09
LDHA-210ENST00000486690 SMARCA4P51532 1647 aa14.44□□□□□ -0.1
LDHA-210ENST00000486690 RNF216Q9NWF9 866 aaPredicted RBP14.44□□□□□ -0.1
LDHA-210ENST00000486690 NPM3O75607 178 aaKnown RBP14.42□□□□□ -0.1
LDHA-210ENST00000486690 HOXD11P31277 338 aaPredicted RBP14.41□□□□□ -0.1
LDHA-210ENST00000486690 SMARCA2P51531 1590 aa14.41□□□□□ -0.1
LDHA-210ENST00000486690 HMGXB3Q12766 1538 aa14.41□□□□□ -0.1
LDHA-210ENST00000486690 PEG3Q9GZU2 1588 aa14.36□□□□□ -0.11
LDHA-210ENST00000486690 BAZ1AQ9NRL2 1556 aaPredicted RBP14.36□□□□□ -0.11
LDHA-210ENST00000486690 CUX2O14529 1486 aa14.33□□□□□ -0.12
LDHA-210ENST00000486690 NESP48681 1621 aa14.27□□□□□ -0.12
LDHA-210ENST00000486690 MROH2BQ7Z745 1585 aa14.27□□□□□ -0.12
LDHA-210ENST00000486690 ERCC6Q03468 1493 aa14.27□□□□□ -0.12
LDHA-210ENST00000486690 BAZ1BQ9UIG0 1483 aaKnown RBP14.27□□□□□ -0.12
LDHA-210ENST00000486690 LAMC3Q9Y6N6 1575 aa14.19□□□□□ -0.14
LDHA-210ENST00000486690 THOC2Q8NI27 1593 aaKnown RBP14.15□□□□□ -0.14
LDHA-210ENST00000486690 KIF21AQ7Z4S6 1674 aa14.11□□□□□ -0.15
LDHA-210ENST00000486690 WIZO95785 1651 aa14.1□□□□□ -0.15
LDHA-210ENST00000486690 DCAF8L1A6NGE4 600 aa14.09□□□□□ -0.15
LDHA-210ENST00000486690 CADPSQ9ULU8 1353 aa14.07□□□□□ -0.16
LDHA-210ENST00000486690 PDS5BQ9NTI5 1447 aa14.07□□□□□ -0.16
LDHA-210ENST00000486690 RSF1Q96T23 1441 aaPredicted RBP13.97□□□□□ -0.17
LDHA-210ENST00000486690 WDR62O43379 1518 aa13.95□□□□□ -0.18
LDHA-210ENST00000486690 MRC2Q9UBG0 1479 aa13.95□□□□□ -0.18
LDHA-210ENST00000486690 CFTRP13569 1480 aa13.93□□□□□ -0.18
LDHA-210ENST00000486690 TOP2AP11388 1531 aaKnown RBP13.9□□□□□ -0.19
LDHA-210ENST00000486690 SLC4A1APQ9BWU0 796 aaKnown RBP13.88□□□□□ -0.19
LDHA-210ENST00000486690 FANCD2Q9BXW9 1451 aa13.87□□□□□ -0.19
LDHA-210ENST00000486690 CEP164Q9UPV0 1460 aa13.87□□□□□ -0.19
LDHA-210ENST00000486690 RNF39Q9H2S5 420 aa13.83□□□□□ -0.2
LDHA-210ENST00000486690 PRDM2Q13029 1718 aa13.79□□□□□ -0.2
LDHA-210ENST00000486690 URB2Q14146 1524 aaKnown RBP13.79□□□□□ -0.2
LDHA-210ENST00000486690 CCDC88BA6NC98 1476 aa13.76□□□□□ -0.21
LDHA-210ENST00000486690 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.72□□□□□ -0.21
LDHA-210ENST00000486690 OSCARQ8IYS5 282 aa13.66□□□□□ -0.22
LDHA-210ENST00000486690 EHMT2Q96KQ7 1210 aa13.65□□□□□ -0.22
LDHA-210ENST00000486690 SLC4A2P04920 1241 aa13.64□□□□□ -0.23
LDHA-210ENST00000486690 TOPBP1Q92547 1522 aa13.63□□□□□ -0.23
LDHA-210ENST00000486690 IFT140Q96RY7 1462 aa13.62□□□□□ -0.23
LDHA-210ENST00000486690 ZNF608Q9ULD9 1512 aaPredicted RBP13.61□□□□□ -0.23
LDHA-210ENST00000486690 TRIM41Q8WV44 630 aa13.61□□□□□ -0.23
LDHA-210ENST00000486690 ABCC8Q09428 1581 aa13.61□□□□□ -0.23
LDHA-210ENST00000486690 POTEHQ6S545 545 aa13.59□□□□□ -0.23
LDHA-210ENST00000486690 C1QBPQ07021 282 aaKnown RBP13.58□□□□□ -0.24
LDHA-210ENST00000486690 DNMBPQ6XZF7 1577 aa13.58□□□□□ -0.24
LDHA-210ENST00000486690 TARBP1Q13395 1621 aaKnown RBP13.56□□□□□ -0.24
LDHA-210ENST00000486690 EIF4G3O43432 1585 aaKnown RBP13.53□□□□□ -0.24
LDHA-210ENST00000486690 RIMBP3CA6NJZ7 1639 aa13.5□□□□□ -0.25
LDHA-210ENST00000486690 RIMBP3BA6NNM3 1639 aa13.5□□□□□ -0.25
LDHA-210ENST00000486690 RIMBP3Q9UFD9 1639 aa13.5□□□□□ -0.25
LDHA-210ENST00000486690 POLA1P09884 1462 aaPredicted RBP13.49□□□□□ -0.25
LDHA-210ENST00000486690 AQRO60306 1485 aaKnown RBP eCLIP13.48□□□□□ -0.252e-8■■■■□ 26.4
LDHA-210ENST00000486690 FOXD4L1Q9NU39 408 aa13.48□□□□□ -0.25
LDHA-210ENST00000486690 U3KPZ7 1027 aaPredicted RBP13.46□□□□□ -0.25
LDHA-210ENST00000486690 CHD1O14646 1710 aa13.44□□□□□ -0.26
LDHA-210ENST00000486690 ARHGEF11O15085 1522 aa13.44□□□□□ -0.26
LDHA-210ENST00000486690 RAD54L2Q9Y4B4 1467 aa13.43□□□□□ -0.26
LDHA-210ENST00000486690 SOGA1O94964 1423 aa13.42□□□□□ -0.26
LDHA-210ENST00000486690 WDR97A6NE52 1622 aa13.4□□□□□ -0.26
LDHA-210ENST00000486690 CUX1P39880 1505 aa13.39□□□□□ -0.27
LDHA-210ENST00000486690 TDRD9Q8NDG6 1382 aaKnown RBP13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms