Protein–RNA interactions for Protein: O15371

EIF3D, Eukaryotic translation initiation factor 3 subunit D, humanhuman

Known RBP eCLIP

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3DO15371 PRKCA-201ENST00000284384 2718 ntTSL 58.63□□□□□ -1.036e-6■■■■□ 21
EIF3DO15371 POLQ-201ENST00000264233 8775 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.066e-6■■■■□ 21
EIF3DO15371 RNF213-203ENST00000427003 3552 ntTSL 1 (best)8.09□□□□□ -1.126e-6■■■■□ 21
EIF3DO15371 SCN9A-201ENST00000303354 9786 ntAPPRIS ALT1 TSL 5 BASIC8.01□□□□□ -1.136e-6■■■■□ 21
EIF3DO15371 PRKCA-202ENST00000413366 8751 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.146e-6■■■■□ 21
EIF3DO15371 POLQ-204ENST00000621776 9055 ntTSL 5 BASIC7.81□□□□□ -1.166e-6■■■■□ 21
EIF3DO15371 SCN9A-202ENST00000409435 5967 ntAPPRIS ALT1 TSL 5 BASIC7.7□□□□□ -1.186e-6■■■■□ 21
EIF3DO15371 RNF213-210ENST00000560083 4212 ntTSL 27.53□□□□□ -1.26e-6■■■■□ 21
EIF3DO15371 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.062e-6■■■■□ 20.7
EIF3DO15371 MEGF6-205ENST00000485002 4705 ntTSL 516.57■□□□□ 0.242e-6■■■■□ 20.7
EIF3DO15371 ZC3H11A-206ENST00000453771 1892 ntTSL 512.59□□□□□ -0.395e-6■■■■□ 20.7
EIF3DO15371 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.373e-7■■■■□ 20.7
EIF3DO15371 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.653e-7■■■■□ 20.7
EIF3DO15371 ZNF638-217ENST00000483421 2076 ntTSL 24.77□□□□□ -1.653e-7■■■■□ 20.7
EIF3DO15371 ZNF638-225ENST00000494241 703 ntTSL 33.96□□□□□ -1.783e-7■■■■□ 20.7
EIF3DO15371 ZC3H11A-209ENST00000480354 501 ntTSL 53.85□□□□□ -1.795e-6■■■■□ 20.7
EIF3DO15371 ZNF638-219ENST00000487638 4233 ntTSL 1 (best)1.81□□□□□ -2.123e-7■■■■□ 20.7
EIF3DO15371 ZNF638-202ENST00000409407 4470 ntTSL 21.79□□□□□ -2.123e-7■■■■□ 20.7
EIF3DO15371 RTEL1-TNFRSF6B-201ENST00000480273 5751 ntTSL 217.9■□□□□ 0.464e-7■■■■□ 20.6
EIF3DO15371 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC17.48■□□□□ 0.394e-7■■■■□ 20.6
EIF3DO15371 RTEL1-TNFRSF6B-203ENST00000492259 4824 ntAPPRIS ALT2 TSL 515.99■□□□□ 0.154e-7■■■■□ 20.6
EIF3DO15371 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC15.9■□□□□ 0.144e-7■■■■□ 20.6
EIF3DO15371 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC15.78■□□□□ 0.124e-7■■■■□ 20.6
EIF3DO15371 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.074e-7■■■■□ 20.6
EIF3DO15371 RTEL1-211ENST00000508582 4273 ntTSL 2 BASIC13.73□□□□□ -0.214e-7■■■■□ 20.6
EIF3DO15371 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC20.15■□□□□ 0.829e-11■■■■□ 20.5
EIF3DO15371 MAD1L1-221ENST00000486340 646 ntTSL 318.29■□□□□ 0.528e-7■■■■□ 20.5
EIF3DO15371 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC17.79■□□□□ 0.449e-11■■■■□ 20.5
EIF3DO15371 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC17.39■□□□□ 0.379e-11■■■■□ 20.5
EIF3DO15371 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.249e-11■■■■□ 20.5
EIF3DO15371 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.29e-11■■■■□ 20.5
EIF3DO15371 MAD1L1-214ENST00000459731 371 ntTSL 311.63□□□□□ -0.558e-7■■■■□ 20.5
EIF3DO15371 MSI2-212ENST00000579590 452 ntTSL 54.83□□□□□ -1.649e-11■■■■□ 20.5
EIF3DO15371 MSI2-215ENST00000582453 496 ntTSL 33.12□□□□□ -1.919e-11■■■■□ 20.5
EIF3DO15371 DST-215ENST00000517840 844 ntTSL 317.59■□□□□ 0.415e-11■■■■□ 20.3
EIF3DO15371 MOV10-204ENST00000413052 3641 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.31e-7■■■■□ 20.3
EIF3DO15371 MOV10-203ENST00000369645 3552 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.41e-7■■■■□ 20.3
EIF3DO15371 MOV10-201ENST00000357443 3383 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.661e-7■■■■□ 20.3
EIF3DO15371 MOV10-202ENST00000369644 4100 ntTSL 1 (best) BASIC10.31□□□□□ -0.761e-7■■■■□ 20.3
EIF3DO15371 MOV10-206ENST00000468624 4689 ntTSL 59.45□□□□□ -0.91e-7■■■■□ 20.3
EIF3DO15371 MOV10-217ENST00000496577 4312 ntTSL 29.24□□□□□ -0.931e-7■■■■□ 20.3
EIF3DO15371 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.355e-7■■■■□ 20.3
EIF3DO15371 CACYBP-207ENST00000473925 804 ntTSL 221.37■■□□□ 1.015e-7■■■■□ 20.3
EIF3DO15371 CACYBP-208ENST00000483307 688 ntTSL 221.06■□□□□ 0.965e-7■■■■□ 20.3
EIF3DO15371 CACYBP-204ENST00000426793 499 ntTSL 313.98□□□□□ -0.175e-7■■■■□ 20.3
EIF3DO15371 CACYBP-205ENST00000461977 574 ntTSL 29.7□□□□□ -0.865e-7■■■■□ 20.3
EIF3DO15371 CACYBP-209ENST00000613570 2835 ntTSL 2 BASIC8.78□□□□□ -15e-7■■■■□ 20.3
EIF3DO15371 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC23.46■■□□□ 1.354e-8■■■■□ 20.1
EIF3DO15371 CALM1-206ENST00000553630 1420 ntTSL 519.92■□□□□ 0.784e-8■■■■□ 20.1
EIF3DO15371 CALM1-215ENST00000557123 569 ntTSL 317.93■□□□□ 0.464e-8■■■■□ 20.1
EIF3DO15371 CALM1-208ENST00000553995 583 ntTSL 217.93■□□□□ 0.464e-8■■■■□ 20.1
EIF3DO15371 CALM1-205ENST00000553542 877 ntTSL 5 BASIC17.93■□□□□ 0.464e-8■■■■□ 20.1
EIF3DO15371 CALM1-213ENST00000556757 588 ntTSL 217.93■□□□□ 0.464e-8■■■■□ 20.1
EIF3DO15371 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC14.55□□□□□ -0.084e-8■■■■□ 20.1
EIF3DO15371 CALM1-214ENST00000557020 557 ntTSL 413.99□□□□□ -0.174e-8■■■■□ 20.1
EIF3DO15371 CALM1-201ENST00000356978 4242 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.294e-8■■■■□ 20.1
EIF3DO15371 IGF1R-210ENST00000559925 2280 ntTSL 1 (best)16.09■□□□□ 0.179e-6■■■■□ 19.9
EIF3DO15371 IGF1R-204ENST00000558355 572 ntTSL 212.17□□□□□ -0.469e-6■■■■□ 19.9
EIF3DO15371 IGF1R-201ENST00000268035 11803 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.639e-6■■■■□ 19.9
EIF3DO15371 IGF1R-203ENST00000557938 574 ntTSL 410.51□□□□□ -0.739e-6■■■■□ 19.9
EIF3DO15371 IGF1R-206ENST00000558762 11726 ntAPPRIS ALT1 TSL 1 (best) BASIC8.01□□□□□ -1.139e-6■■■■□ 19.9
EIF3DO15371 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.689e-6■■■■□ 19.9
EIF3DO15371 CEP72-203ENST00000512038 656 ntTSL 218.27■□□□□ 0.522e-7■■■■□ 19.8
EIF3DO15371 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.482e-7■■■■□ 19.8
EIF3DO15371 MAD1L1-205ENST00000421113 564 ntTSL 420.62■□□□□ 0.893e-6■■■■□ 19.7
EIF3DO15371 CHD2-223ENST00000636306 1755 ntTSL 511.32□□□□□ -0.61e-7■■■■□ 19.3
EIF3DO15371 CHD2-229ENST00000637789 904 ntTSL 59.78□□□□□ -0.841e-7■■■■□ 19.3
EIF3DO15371 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC24.02■■□□□ 1.444e-7■■■□□ 19.1
EIF3DO15371 FAM120B-205ENST00000630384 3721 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.234e-7■■■□□ 19.1
EIF3DO15371 FAM120B-201ENST00000476287 5155 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.844e-7■■■□□ 19.1
EIF3DO15371 FAM120B-203ENST00000537664 3212 ntAPPRIS ALT2 TSL 2 BASIC8.76□□□□□ -1.014e-7■■■□□ 19.1
EIF3DO15371 MAD1L1-209ENST00000438959 839 ntTSL 315.02■□□□□ -06e-7■■■□□ 19.1
EIF3DO15371 BIRC6-210ENST00000483194 702 ntTSL 33.78□□□□□ -1.83e-6■■■□□ 18.9
EIF3DO15371 PCNA-202ENST00000379160 1359 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.069e-39■■■□□ 18.9
EIF3DO15371 PCNA-201ENST00000379143 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.329e-39■■■□□ 18.9
EIF3DO15371 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.882e-7■■■□□ 18.9
EIF3DO15371 LRRC27-209ENST00000475747 2660 ntTSL 218.05■□□□□ 0.482e-7■■■□□ 18.9
EIF3DO15371 LRRC27-202ENST00000368612 1765 ntTSL 2 BASIC13.13□□□□□ -0.312e-7■■■□□ 18.9
EIF3DO15371 LRRC27-206ENST00000462656 2302 ntTSL 211.51□□□□□ -0.572e-7■■■□□ 18.9
EIF3DO15371 LRRC27-204ENST00000368614 6374 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.782e-7■■■□□ 18.9
EIF3DO15371 LRRC27-208ENST00000472556 646 ntTSL 1 (best)9.89□□□□□ -0.832e-7■■■□□ 18.9
EIF3DO15371 FRAS1-203ENST00000508900 2169 ntTSL 1 (best)13.62□□□□□ -0.231e-6■■■□□ 18.6
EIF3DO15371 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC23.94■■□□□ 1.421e-6■■■□□ 18.6
EIF3DO15371 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.271e-6■■■□□ 18.6
EIF3DO15371 C22orf39-204ENST00000509549 2979 ntTSL 213.29□□□□□ -0.281e-6■■■□□ 18.6
EIF3DO15371 RNF123-203ENST00000433785 1555 ntTSL 5 BASIC15.33■□□□□ 0.051e-6■■■□□ 18.3
EIF3DO15371 RNF123-210ENST00000487805 5882 ntTSL 214.02□□□□□ -0.171e-6■■■□□ 18.3
EIF3DO15371 RNF123-209ENST00000486102 4564 ntTSL 1 (best)12.96□□□□□ -0.331e-6■■■□□ 18.3
EIF3DO15371 RNF123-207ENST00000457726 4506 ntTSL 1 (best)11.27□□□□□ -0.611e-6■■■□□ 18.3
EIF3DO15371 RNF123-201ENST00000327697 4311 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.641e-6■■■□□ 18.3
EIF3DO15371 RNF123-213ENST00000498376 746 ntTSL 310.17□□□□□ -0.781e-6■■■□□ 18.3
EIF3DO15371 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC15.82■□□□□ 0.129e-7■■■□□ 18.2
EIF3DO15371 PKD1P6-NPIPP1-201ENST00000340301 547 ntTSL 513.64□□□□□ -0.239e-7■■■□□ 18.2
EIF3DO15371 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.368e-9■■■□□ 18.2
EIF3DO15371 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC16.31■□□□□ 0.28e-9■■■□□ 18.2
EIF3DO15371 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC15.69■□□□□ 0.18e-9■■■□□ 18.2
EIF3DO15371 STIP1-204ENST00000536973 738 ntTSL 514.37□□□□□ -0.118e-9■■■□□ 18.2
EIF3DO15371 STIP1-211ENST00000543847 772 ntTSL 1 (best) BASIC11.69□□□□□ -0.548e-9■■■□□ 18.2
EIF3DO15371 STIP1-209ENST00000540736 399 ntTSL 26.06□□□□□ -1.448e-9■■■□□ 18.2
EIF3DO15371 PDE9A-214ENST00000460905 715 ntTSL 524.92■■□□□ 1.583e-6■■■□□ 18.1
Retrieved 100 of 4,069 protein–RNA pairs in 269.3 ms