RNA–Protein interactions for RNA: ENST00000475747.5

LRRC27-209, Transcript of leucine rich repeat containing 27, humanhuman

TSL 2

Gene LRRC27, Length 2,660 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC27-209ENST00000475747 NISCHQ9Y2I1 1504 aa36.29■■■■□ 3.4
LRRC27-209ENST00000475747 CCDC180Q9P1Z9 1646 aa31.04■■■□□ 2.56
LRRC27-209ENST00000475747 DCAF8L2P0C7V8 631 aa30.92■■■□□ 2.54
LRRC27-209ENST00000475747 SHROOM4Q9ULL8 1493 aa30.84■■■□□ 2.53
LRRC27-209ENST00000475747 ZCCHC6Q5VYS8 1495 aaKnown RBP30.48■■■□□ 2.47
LRRC27-209ENST00000475747 ABCC9O60706 1549 aa30.05■■■□□ 2.4
LRRC27-209ENST00000475747 SUPT5HO00267 1087 aaKnown RBP29.76■■■□□ 2.35
LRRC27-209ENST00000475747 DCAF1Q9Y4B6 1507 aa29.5■■■□□ 2.31
LRRC27-209ENST00000475747 SCRIBQ14160 1630 aa29.38■■■□□ 2.29
LRRC27-209ENST00000475747 NACADO15069 1562 aa28.98■■■□□ 2.23
LRRC27-209ENST00000475747 MYO15BQ96JP2 1530 aa28.92■■■□□ 2.22
LRRC27-209ENST00000475747 RB1CC1Q8TDY2 1594 aa28.78■■■□□ 2.2
LRRC27-209ENST00000475747 PABPN1Q86U42 306 aaKnown RBP eCLIP28.69■■■□□ 2.18
LRRC27-209ENST00000475747 CECR2Q9BXF3 1484 aa28.59■■■□□ 2.17
LRRC27-209ENST00000475747 RSF1Q96T23 1441 aaPredicted RBP28.47■■■□□ 2.15
LRRC27-209ENST00000475747 UNC13AQ9UPW8 1703 aa28.41■■■□□ 2.14
LRRC27-209ENST00000475747 MROH2BQ7Z745 1585 aa28.31■■■□□ 2.12
LRRC27-209ENST00000475747 CHIC1Q5VXU3 224 aa28.26■■■□□ 2.11
LRRC27-209ENST00000475747 WIZO95785 1651 aa28.13■■■□□ 2.09
LRRC27-209ENST00000475747 BICRAQ9NZM4 1560 aa28.12■■■□□ 2.09
LRRC27-209ENST00000475747 BAZ1AQ9NRL2 1556 aaPredicted RBP27.89■■■□□ 2.05
LRRC27-209ENST00000475747 SMARCA4P51532 1647 aa27.82■■■□□ 2.04
LRRC27-209ENST00000475747 EHMT2Q96KQ7 1210 aa27.67■■■□□ 2.02
LRRC27-209ENST00000475747 FAM9AQ8IZU1 332 aaPredicted RBP27.63■■■□□ 2.01
LRRC27-209ENST00000475747 LOC105371045A0A1W2PR82 267 aa27.62■■■□□ 2.01
LRRC27-209ENST00000475747 TRIM41Q8WV44 630 aa27.58■■■□□ 2.01
LRRC27-209ENST00000475747 CCDC88BA6NC98 1476 aa27.49■■□□□ 1.99
LRRC27-209ENST00000475747 TOP2AP11388 1531 aaKnown RBP27.48■■□□□ 1.99
LRRC27-209ENST00000475747 SMARCA2P51531 1590 aa27.38■■□□□ 1.97
LRRC27-209ENST00000475747 ATAD2BQ9ULI0 1458 aa27.38■■□□□ 1.97
LRRC27-209ENST00000475747 ABCC8Q09428 1581 aa27.28■■□□□ 1.96
LRRC27-209ENST00000475747 BAZ1BQ9UIG0 1483 aaKnown RBP27.28■■□□□ 1.96
LRRC27-209ENST00000475747 EIF4G1Q04637 1599 aaKnown RBP27.26■■□□□ 1.96
LRRC27-209ENST00000475747 PEG3Q9GZU2 1588 aa27.15■■□□□ 1.94
LRRC27-209ENST00000475747 DNAJC5BQ9UF47 199 aa26.89■■□□□ 1.9
LRRC27-209ENST00000475747 NCAPD3P42695 1498 aa26.89■■□□□ 1.89
LRRC27-209ENST00000475747 CC2D2AQ9P2K1 1620 aa26.87■■□□□ 1.89
LRRC27-209ENST00000475747 SOGA1O94964 1423 aa26.84■■□□□ 1.89
LRRC27-209ENST00000475747 RUSC2Q8N2Y8 1516 aa26.8■■□□□ 1.88
LRRC27-209ENST00000475747 WRNQ14191 1432 aaPredicted RBP eCLIP26.77■■□□□ 1.88
LRRC27-209ENST00000475747 HMGXB3Q12766 1538 aa26.75■■□□□ 1.87
LRRC27-209ENST00000475747 SYNJ1O43426 1573 aa26.7■■□□□ 1.87
LRRC27-209ENST00000475747 HRCP23327 699 aa26.66■■□□□ 1.86
LRRC27-209ENST00000475747 PPARGC1BQ86YN6 1023 aaKnown RBP26.66■■□□□ 1.86
LRRC27-209ENST00000475747 PCGF6Q9BYE7 350 aa26.64■■□□□ 1.86
LRRC27-209ENST00000475747 RANGAP1P46060 587 aaPredicted RBP26.55■■□□□ 1.84
LRRC27-209ENST00000475747 NESP48681 1621 aa26.5■■□□□ 1.83
LRRC27-209ENST00000475747 CSRNP3Q8WYN3 585 aa26.49■■□□□ 1.83
LRRC27-209ENST00000475747 UBTFP17480 764 aaKnown RBP26.48■■□□□ 1.83
LRRC27-209ENST00000475747 TTBK1Q5TCY1 1321 aaPredicted RBP26.47■■□□□ 1.83
LRRC27-209ENST00000475747 CFTRP13569 1480 aa26.47■■□□□ 1.83
LRRC27-209ENST00000475747 CADPSQ9ULU8 1353 aa26.42■■□□□ 1.82
LRRC27-209ENST00000475747 CUX1P39880 1505 aa26.38■■□□□ 1.81
LRRC27-209ENST00000475747 TOP2BQ02880 1626 aa26.29■■□□□ 1.8
LRRC27-209ENST00000475747 FANCD2Q9BXW9 1451 aa26.21■■□□□ 1.79
LRRC27-209ENST00000475747 CEP162Q5TB80 1403 aa26.18■■□□□ 1.78
LRRC27-209ENST00000475747 RAPGEF2Q9Y4G8 1499 aa26.17■■□□□ 1.78
LRRC27-209ENST00000475747 BIVM-ERCC5R4GMW8 1640 aa26.16■■□□□ 1.78
LRRC27-209ENST00000475747 EEA1Q15075 1411 aa26.13■■□□□ 1.77
LRRC27-209ENST00000475747 GOLGA3Q08378 1498 aa26.1■■□□□ 1.77
LRRC27-209ENST00000475747 FGD5Q6ZNL6 1462 aa26.08■■□□□ 1.76
LRRC27-209ENST00000475747 TNIKQ9UKE5 1360 aa26.05■■□□□ 1.76
LRRC27-209ENST00000475747 RAD54L2Q9Y4B4 1467 aa26.05■■□□□ 1.76
LRRC27-209ENST00000475747 TRIM26Q12899 539 aaPredicted RBP26.05■■□□□ 1.76
LRRC27-209ENST00000475747 CUX2O14529 1486 aa26.04■■□□□ 1.76
LRRC27-209ENST00000475747 PRDM2Q13029 1718 aa26.02■■□□□ 1.76
LRRC27-209ENST00000475747 CEP164Q9UPV0 1460 aa26.02■■□□□ 1.76
LRRC27-209ENST00000475747 KIF27Q86VH2 1401 aa25.96■■□□□ 1.75
LRRC27-209ENST00000475747 TOPBP1Q92547 1522 aa25.91■■□□□ 1.74
LRRC27-209ENST00000475747 URB2Q14146 1524 aaKnown RBP25.9■■□□□ 1.74
LRRC27-209ENST00000475747 KIF21BO75037 1637 aa25.89■■□□□ 1.74
LRRC27-209ENST00000475747 CLIP1P30622 1438 aa25.87■■□□□ 1.73
LRRC27-209ENST00000475747 POLA1P09884 1462 aaPredicted RBP25.87■■□□□ 1.73
LRRC27-209ENST00000475747 KIF21AQ7Z4S6 1674 aa25.86■■□□□ 1.73
LRRC27-209ENST00000475747 LAMC3Q9Y6N6 1575 aa25.85■■□□□ 1.73
LRRC27-209ENST00000475747 TDRD9Q8NDG6 1382 aaKnown RBP25.84■■□□□ 1.73
LRRC27-209ENST00000475747 IGF1RP08069 1367 aa25.84■■□□□ 1.73
LRRC27-209ENST00000475747 PRXQ9BXM0 1461 aa25.83■■□□□ 1.73
LRRC27-209ENST00000475747 PDS5BQ9NTI5 1447 aa25.81■■□□□ 1.72
LRRC27-209ENST00000475747 DNMBPQ6XZF7 1577 aa25.8■■□□□ 1.72
LRRC27-209ENST00000475747 P3H3Q8IVL6 736 aa25.75■■□□□ 1.71
LRRC27-209ENST00000475747 CARMIL1Q5VZK9 1371 aa25.72■■□□□ 1.71
LRRC27-209ENST00000475747 PELP1Q8IZL8 1130 aaKnown RBP25.65■■□□□ 1.7
LRRC27-209ENST00000475747 ERICH3Q5RHP9 1530 aa25.6■■□□□ 1.69
LRRC27-209ENST00000475747 ABCA10Q8WWZ4 1543 aa25.6■■□□□ 1.69
LRRC27-209ENST00000475747 ARAP1Q96P48 1450 aa25.58■■□□□ 1.69
LRRC27-209ENST00000475747 AQRO60306 1485 aaKnown RBP eCLIP25.57■■□□□ 1.68
LRRC27-209ENST00000475747 ERCC6Q03468 1493 aa25.57■■□□□ 1.68
LRRC27-209ENST00000475747 ATP1B4Q9UN42 357 aaPredicted RBP25.55■■□□□ 1.68
LRRC27-209ENST00000475747 VPS8Q8N3P4 1428 aa25.55■■□□□ 1.68
LRRC27-209ENST00000475747 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.53■■□□□ 1.68
LRRC27-209ENST00000475747 APLP2Q06481 763 aa25.53■■□□□ 1.68
LRRC27-209ENST00000475747 KANK4Q5T7N3 995 aaPredicted RBP25.5■■□□□ 1.67
LRRC27-209ENST00000475747 GAPVD1Q14C86 1478 aa25.48■■□□□ 1.67
LRRC27-209ENST00000475747 ARHGAP35Q9NRY4 1499 aa25.48■■□□□ 1.67
LRRC27-209ENST00000475747 MRC2Q9UBG0 1479 aa25.48■■□□□ 1.67
LRRC27-209ENST00000475747 ZNF608Q9ULD9 1512 aaPredicted RBP25.47■■□□□ 1.67
LRRC27-209ENST00000475747 HNRNPUL2Q1KMD3 747 aaKnown RBP25.46■■□□□ 1.67
LRRC27-209ENST00000475747 WDR97A6NE52 1622 aa25.39■■□□□ 1.66
LRRC27-209ENST00000475747 TARBP1Q13395 1621 aaKnown RBP25.39■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms