RNA–Protein interactions for RNA: ENST00000427003.7

RNF213-203, Transcript of ring finger protein 213, humanhuman

TSL 1 (best)

Gene RNF213, Length 3,552 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF213-203ENST00000427003 NISCHQ9Y2I1 1504 aa13.52□□□□□ -0.24
RNF213-203ENST00000427003 PELP1Q8IZL8 1130 aaKnown RBP13.34□□□□□ -0.27
RNF213-203ENST00000427003 HRCP23327 699 aa13.15□□□□□ -0.3
RNF213-203ENST00000427003 MYT1Q01538 1121 aa12.97□□□□□ -0.33
RNF213-203ENST00000427003 PPARGC1BQ86YN6 1023 aaKnown RBP12.95□□□□□ -0.34
RNF213-203ENST00000427003 PCGF6Q9BYE7 350 aa12.95□□□□□ -0.34
RNF213-203ENST00000427003 SUPT5HO00267 1087 aaKnown RBP12.73□□□□□ -0.37
RNF213-203ENST00000427003 SCAF1Q9H7N4 1312 aaKnown RBP12.59□□□□□ -0.39
RNF213-203ENST00000427003 SHROOM4Q9ULL8 1493 aa12.57□□□□□ -0.4
RNF213-203ENST00000427003 ZEB1P37275 1124 aaPredicted RBP12.44□□□□□ -0.42
RNF213-203ENST00000427003 SLC24A1O60721 1099 aa12.43□□□□□ -0.42
RNF213-203ENST00000427003 MYO15BQ96JP2 1530 aa12.39□□□□□ -0.43
RNF213-203ENST00000427003 CHIC1Q5VXU3 224 aa12.38□□□□□ -0.43
RNF213-203ENST00000427003 CENPBP07199 599 aaPredicted RBP12.35□□□□□ -0.43
RNF213-203ENST00000427003 TRIM26Q12899 539 aaPredicted RBP12.34□□□□□ -0.43
RNF213-203ENST00000427003 GTF3C3Q9Y5Q9 886 aa12.29□□□□□ -0.44
RNF213-203ENST00000427003 ACIN1Q9UKV3 1341 aaKnown RBP12.28□□□□□ -0.44
RNF213-203ENST00000427003 LOC105371045A0A1W2PR82 267 aa12.22□□□□□ -0.45
RNF213-203ENST00000427003 NEUROD1Q13562 356 aa12.2□□□□□ -0.46
RNF213-203ENST00000427003 DCAF1Q9Y4B6 1507 aa12.18□□□□□ -0.46
RNF213-203ENST00000427003 TTBK1Q5TCY1 1321 aaPredicted RBP12.14□□□□□ -0.47
RNF213-203ENST00000427003 YTHDC1Q96MU7 727 aaKnown RBP12.06□□□□□ -0.48
RNF213-203ENST00000427003 CCDC180Q9P1Z9 1646 aa12.03□□□□□ -0.48
RNF213-203ENST00000427003 DIEXFQ68CQ4 756 aaKnown RBP12.01□□□□□ -0.49
RNF213-203ENST00000427003 CCER1Q8TC90 406 aaPredicted RBP12□□□□□ -0.49
RNF213-203ENST00000427003 BCL11AQ9H165 835 aa11.96□□□□□ -0.5
RNF213-203ENST00000427003 EHMT2Q96KQ7 1210 aa11.94□□□□□ -0.5
RNF213-203ENST00000427003 DCAF8L2P0C7V8 631 aa11.88□□□□□ -0.51
RNF213-203ENST00000427003 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.87□□□□□ -0.51
RNF213-203ENST00000427003 FAM9AQ8IZU1 332 aaPredicted RBP11.85□□□□□ -0.51
RNF213-203ENST00000427003 ANP32EQ9BTT0 268 aa11.78□□□□□ -0.52
RNF213-203ENST00000427003 TRIM41Q8WV44 630 aa11.68□□□□□ -0.54
RNF213-203ENST00000427003 ZNF316A6NFI3 1004 aaPredicted RBP11.66□□□□□ -0.54
RNF213-203ENST00000427003 CSRNP3Q8WYN3 585 aa11.63□□□□□ -0.55
RNF213-203ENST00000427003 ERICH6Q7L0X2 663 aa11.62□□□□□ -0.55
RNF213-203ENST00000427003 PRKCSHP14314 528 aaPredicted RBP11.61□□□□□ -0.55
RNF213-203ENST00000427003 MIER1Q8N108 512 aa11.58□□□□□ -0.56
RNF213-203ENST00000427003 CLSPNQ9HAW4 1339 aa11.52□□□□□ -0.57
RNF213-203ENST00000427003 BCANQ96GW7 911 aa11.52□□□□□ -0.57
RNF213-203ENST00000427003 TSHZ2Q9NRE2 1034 aa11.51□□□□□ -0.57
RNF213-203ENST00000427003 SUPT16HQ9Y5B9 1047 aaKnown RBP11.51□□□□□ -0.57
RNF213-203ENST00000427003 ZCCHC6Q5VYS8 1495 aaKnown RBP11.51□□□□□ -0.57
RNF213-203ENST00000427003 NEFLP07196 543 aa11.45□□□□□ -0.58
RNF213-203ENST00000427003 PLPPR3Q6T4P5 718 aa11.41□□□□□ -0.58
RNF213-203ENST00000427003 HNRNPUL2Q1KMD3 747 aaKnown RBP11.33□□□□□ -0.6
RNF213-203ENST00000427003 FKBP8Q14318 412 aa11.33□□□□□ -0.6
RNF213-203ENST00000427003 RBM19Q9Y4C8 960 aaKnown RBP11.29□□□□□ -0.6
RNF213-203ENST00000427003 RTN4Q9NQC3 1192 aaKnown RBP11.27□□□□□ -0.61
RNF213-203ENST00000427003 MYT1LQ9UL68 1186 aa11.25□□□□□ -0.61
RNF213-203ENST00000427003 ITGAEP38570 1179 aa11.24□□□□□ -0.61
RNF213-203ENST00000427003 APLP2Q06481 763 aa11.2□□□□□ -0.62
RNF213-203ENST00000427003 DEKP35659 375 aaKnown RBP11.2□□□□□ -0.62
RNF213-203ENST00000427003 CDK11AQ9UQ88 783 aaPredicted RBP11.19□□□□□ -0.62
RNF213-203ENST00000427003 ANO8Q9HCE9 1232 aaPredicted RBP11.18□□□□□ -0.62
RNF213-203ENST00000427003 UBTFP17480 764 aaKnown RBP11.17□□□□□ -0.62
RNF213-203ENST00000427003 ABCC9O60706 1549 aa11.16□□□□□ -0.62
RNF213-203ENST00000427003 RTL5Q5HYW3 569 aaPredicted RBP11.16□□□□□ -0.62
RNF213-203ENST00000427003 DAXXQ9UER7 740 aaPredicted RBP11.16□□□□□ -0.62
RNF213-203ENST00000427003 NBR1Q14596 966 aa11.14□□□□□ -0.63
RNF213-203ENST00000427003 MSH5O43196 834 aa11.1□□□□□ -0.63
RNF213-203ENST00000427003 CCDC136Q96JN2 1154 aa11.1□□□□□ -0.63
RNF213-203ENST00000427003 EIF5BO60841 1220 aaKnown RBP11.07□□□□□ -0.64
RNF213-203ENST00000427003 KCNH8Q96L42 1107 aa11.07□□□□□ -0.64
RNF213-203ENST00000427003 RSF1Q96T23 1441 aaPredicted RBP11.06□□□□□ -0.64
RNF213-203ENST00000427003 TRIM52Q96A61 297 aa11.05□□□□□ -0.64
RNF213-203ENST00000427003 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.04□□□□□ -0.64
RNF213-203ENST00000427003 SALL2Q9Y467 1007 aaPredicted RBP11.04□□□□□ -0.64
RNF213-203ENST00000427003 CEP162Q5TB80 1403 aa11.03□□□□□ -0.64
RNF213-203ENST00000427003 RB1CC1Q8TDY2 1594 aa11.03□□□□□ -0.64
RNF213-203ENST00000427003 RANGAP1P46060 587 aaPredicted RBP11.01□□□□□ -0.65
RNF213-203ENST00000427003 FANCIQ9NVI1 1328 aa11.01□□□□□ -0.65
RNF213-203ENST00000427003 WRNQ14191 1432 aaPredicted RBP eCLIP11.01□□□□□ -0.65
RNF213-203ENST00000427003 ERICH6BQ5W0A0 696 aa11□□□□□ -0.65
RNF213-203ENST00000427003 IRX6P78412 446 aaPredicted RBP11□□□□□ -0.65
RNF213-203ENST00000427003 DDX10Q13206 875 aaKnown RBP10.97□□□□□ -0.65
RNF213-203ENST00000427003 ANP32CO43423 234 aa10.95□□□□□ -0.66
RNF213-203ENST00000427003 NOP58Q9Y2X3 529 aaKnown RBP10.95□□□□□ -0.66
RNF213-203ENST00000427003 ANP32AP39687 249 aaKnown RBP10.93□□□□□ -0.66
RNF213-203ENST00000427003 NCBP3Q53F19 620 aaKnown RBP10.92□□□□□ -0.66
RNF213-203ENST00000427003 ZBTB47Q9UFB7 747 aaPredicted RBP10.89□□□□□ -0.67
RNF213-203ENST00000427003 TNIKQ9UKE5 1360 aa10.89□□□□□ -0.67
RNF213-203ENST00000427003 HNRNPUQ00839 825 aaKnown RBP eCLIP10.88□□□□□ -0.67
RNF213-203ENST00000427003 IL27Q8NEV9 243 aa10.87□□□□□ -0.67
RNF213-203ENST00000427003 UBE2Q2Q8WVN8 375 aa10.87□□□□□ -0.67
RNF213-203ENST00000427003 AEBP2Q6ZN18 517 aaPredicted RBP10.83□□□□□ -0.68
RNF213-203ENST00000427003 DHX57Q6P158 1386 aaKnown RBP10.82□□□□□ -0.68
RNF213-203ENST00000427003 PPP4R2Q9NY27 417 aa10.82□□□□□ -0.68
RNF213-203ENST00000427003 NPM2Q86SE8 214 aaKnown RBP10.81□□□□□ -0.68
RNF213-203ENST00000427003 GLIPR1L2Q4G1C9 344 aa10.81□□□□□ -0.68
RNF213-203ENST00000427003 B4GALNT3Q6L9W6 998 aa10.8□□□□□ -0.68
RNF213-203ENST00000427003 AMER1Q5JTC6 1135 aaPredicted RBP10.8□□□□□ -0.68
RNF213-203ENST00000427003 HIRIP3Q9BW71 556 aaPredicted RBP10.8□□□□□ -0.68
RNF213-203ENST00000427003 SOGA1O94964 1423 aa10.78□□□□□ -0.68
RNF213-203ENST00000427003 PAK3O75914 559 aaPredicted RBP10.78□□□□□ -0.68
RNF213-203ENST00000427003 KCNA4P22459 653 aa10.77□□□□□ -0.68
RNF213-203ENST00000427003 NEFMP07197 916 aa10.76□□□□□ -0.69
RNF213-203ENST00000427003 PKNOX2Q96KN3 472 aa10.76□□□□□ -0.69
RNF213-203ENST00000427003 CCDC88BA6NC98 1476 aa10.76□□□□□ -0.69
RNF213-203ENST00000427003 SCRIBQ14160 1630 aa10.75□□□□□ -0.69
RNF213-203ENST00000427003 CCER2I3L3R5 266 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms