RNA–Protein interactions for RNA: ENST00000560083.1

RNF213-210, Transcript of ring finger protein 213, humanhuman

TSL 2

Gene RNF213, Length 4,212 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF213-210ENST00000560083 NISCHQ9Y2I1 1504 aa15.4■□□□□ 0.06
RNF213-210ENST00000560083 CCDC180Q9P1Z9 1646 aa13.7□□□□□ -0.22
RNF213-210ENST00000560083 DCAF1Q9Y4B6 1507 aa12.98□□□□□ -0.33
RNF213-210ENST00000560083 MYO15BQ96JP2 1530 aa12.95□□□□□ -0.34
RNF213-210ENST00000560083 ZCCHC6Q5VYS8 1495 aaKnown RBP12.91□□□□□ -0.34
RNF213-210ENST00000560083 NACADO15069 1562 aa12.8□□□□□ -0.36
RNF213-210ENST00000560083 RB1CC1Q8TDY2 1594 aa12.68□□□□□ -0.38
RNF213-210ENST00000560083 ABCC9O60706 1549 aa12.68□□□□□ -0.38
RNF213-210ENST00000560083 DCAF8L2P0C7V8 631 aa12.5□□□□□ -0.41
RNF213-210ENST00000560083 SHROOM4Q9ULL8 1493 aa12.43□□□□□ -0.42
RNF213-210ENST00000560083 SCRIBQ14160 1630 aa12.22□□□□□ -0.45
RNF213-210ENST00000560083 UNC13AQ9UPW8 1703 aa12.07□□□□□ -0.48
RNF213-210ENST00000560083 BAZ1AQ9NRL2 1556 aaPredicted RBP12.01□□□□□ -0.49
RNF213-210ENST00000560083 BICRAQ9NZM4 1560 aa12.01□□□□□ -0.49
RNF213-210ENST00000560083 SMARCA2P51531 1590 aa11.87□□□□□ -0.51
RNF213-210ENST00000560083 SMARCA4P51532 1647 aa11.85□□□□□ -0.51
RNF213-210ENST00000560083 PEG3Q9GZU2 1588 aa11.83□□□□□ -0.52
RNF213-210ENST00000560083 PABPN1Q86U42 306 aaKnown RBP eCLIP11.82□□□□□ -0.52
RNF213-210ENST00000560083 RSF1Q96T23 1441 aaPredicted RBP11.8□□□□□ -0.52
RNF213-210ENST00000560083 EIF4G1Q04637 1599 aaKnown RBP11.76□□□□□ -0.53
RNF213-210ENST00000560083 HMGXB3Q12766 1538 aa11.74□□□□□ -0.53
RNF213-210ENST00000560083 NCAPD3P42695 1498 aa11.72□□□□□ -0.53
RNF213-210ENST00000560083 CECR2Q9BXF3 1484 aa11.72□□□□□ -0.53
RNF213-210ENST00000560083 MROH2BQ7Z745 1585 aa11.72□□□□□ -0.53
RNF213-210ENST00000560083 TOP2AP11388 1531 aaKnown RBP11.71□□□□□ -0.53
RNF213-210ENST00000560083 ATAD2BQ9ULI0 1458 aa11.68□□□□□ -0.54
RNF213-210ENST00000560083 BAZ1BQ9UIG0 1483 aaKnown RBP11.67□□□□□ -0.54
RNF213-210ENST00000560083 SUPT5HO00267 1087 aaKnown RBP11.65□□□□□ -0.55
RNF213-210ENST00000560083 WIZO95785 1651 aa11.58□□□□□ -0.56
RNF213-210ENST00000560083 CC2D2AQ9P2K1 1620 aa11.57□□□□□ -0.56
RNF213-210ENST00000560083 CCDC88BA6NC98 1476 aa11.44□□□□□ -0.58
RNF213-210ENST00000560083 LAMC3Q9Y6N6 1575 aa11.39□□□□□ -0.59
RNF213-210ENST00000560083 PRDM2Q13029 1718 aa11.37□□□□□ -0.59
RNF213-210ENST00000560083 CADPSQ9ULU8 1353 aa11.37□□□□□ -0.59
RNF213-210ENST00000560083 CFTRP13569 1480 aa11.36□□□□□ -0.59
RNF213-210ENST00000560083 ABCC8Q09428 1581 aa11.36□□□□□ -0.59
RNF213-210ENST00000560083 PDS5BQ9NTI5 1447 aa11.34□□□□□ -0.59
RNF213-210ENST00000560083 EEA1Q15075 1411 aa11.25□□□□□ -0.61
RNF213-210ENST00000560083 DNAJC5BQ9UF47 199 aa11.25□□□□□ -0.61
RNF213-210ENST00000560083 WRNQ14191 1432 aaPredicted RBP eCLIP11.21□□□□□ -0.62
RNF213-210ENST00000560083 CEP164Q9UPV0 1460 aa11.2□□□□□ -0.62
RNF213-210ENST00000560083 TRIM41Q8WV44 630 aa11.19□□□□□ -0.62
RNF213-210ENST00000560083 FANCD2Q9BXW9 1451 aa11.18□□□□□ -0.62
RNF213-210ENST00000560083 CHIC1Q5VXU3 224 aa11.17□□□□□ -0.62
RNF213-210ENST00000560083 BIVM-ERCC5R4GMW8 1640 aa11.15□□□□□ -0.62
RNF213-210ENST00000560083 WDR97A6NE52 1622 aa11.15□□□□□ -0.62
RNF213-210ENST00000560083 TOP2BQ02880 1626 aa11.14□□□□□ -0.63
RNF213-210ENST00000560083 DNMBPQ6XZF7 1577 aa11.14□□□□□ -0.63
RNF213-210ENST00000560083 MRC2Q9UBG0 1479 aa11.12□□□□□ -0.63
RNF213-210ENST00000560083 ERCC6Q03468 1493 aa11.09□□□□□ -0.63
RNF213-210ENST00000560083 KIF27Q86VH2 1401 aa11.04□□□□□ -0.64
RNF213-210ENST00000560083 WDR62O43379 1518 aa11.03□□□□□ -0.64
RNF213-210ENST00000560083 TOPBP1Q92547 1522 aa11.03□□□□□ -0.64
RNF213-210ENST00000560083 IFT140Q96RY7 1462 aa11.02□□□□□ -0.65
RNF213-210ENST00000560083 CUX1P39880 1505 aa11.01□□□□□ -0.65
RNF213-210ENST00000560083 NESP48681 1621 aa10.99□□□□□ -0.65
RNF213-210ENST00000560083 SYNJ1O43426 1573 aa10.99□□□□□ -0.65
RNF213-210ENST00000560083 ABCA10Q8WWZ4 1543 aa10.98□□□□□ -0.65
RNF213-210ENST00000560083 KIF21AQ7Z4S6 1674 aa10.98□□□□□ -0.65
RNF213-210ENST00000560083 CUX2O14529 1486 aa10.98□□□□□ -0.65
RNF213-210ENST00000560083 FGD5Q6ZNL6 1462 aa10.96□□□□□ -0.65
RNF213-210ENST00000560083 SOGA1O94964 1423 aa10.96□□□□□ -0.65
RNF213-210ENST00000560083 URB2Q14146 1524 aaKnown RBP10.95□□□□□ -0.66
RNF213-210ENST00000560083 CSRNP3Q8WYN3 585 aa10.93□□□□□ -0.66
RNF213-210ENST00000560083 POLA1P09884 1462 aaPredicted RBP10.93□□□□□ -0.66
RNF213-210ENST00000560083 THOC2Q8NI27 1593 aaKnown RBP10.93□□□□□ -0.66
RNF213-210ENST00000560083 ERICH3Q5RHP9 1530 aa10.92□□□□□ -0.66
RNF213-210ENST00000560083 CUL7Q14999 1698 aa10.92□□□□□ -0.66
RNF213-210ENST00000560083 KIF21BO75037 1637 aa10.91□□□□□ -0.66
RNF213-210ENST00000560083 GOLGA3Q08378 1498 aa10.89□□□□□ -0.67
RNF213-210ENST00000560083 FAM9AQ8IZU1 332 aaPredicted RBP10.89□□□□□ -0.67
RNF213-210ENST00000560083 GRIN2BQ13224 1484 aa10.87□□□□□ -0.67
RNF213-210ENST00000560083 GAPVD1Q14C86 1478 aa10.85□□□□□ -0.67
RNF213-210ENST00000560083 TARBP1Q13395 1621 aaKnown RBP10.85□□□□□ -0.67
RNF213-210ENST00000560083 MAGI1Q96QZ7 1491 aaPredicted RBP10.84□□□□□ -0.67
RNF213-210ENST00000560083 ABCA5Q8WWZ7 1642 aa10.83□□□□□ -0.67
RNF213-210ENST00000560083 TNIKQ9UKE5 1360 aa10.82□□□□□ -0.68
RNF213-210ENST00000560083 RAPGEF2Q9Y4G8 1499 aa10.82□□□□□ -0.68
RNF213-210ENST00000560083 FHAD1B1AJZ9 1412 aa10.82□□□□□ -0.68
RNF213-210ENST00000560083 PRXQ9BXM0 1461 aa10.81□□□□□ -0.68
RNF213-210ENST00000560083 CARMIL1Q5VZK9 1371 aa10.8□□□□□ -0.68
RNF213-210ENST00000560083 IGF1RP08069 1367 aa10.78□□□□□ -0.68
RNF213-210ENST00000560083 RAD54L2Q9Y4B4 1467 aa10.76□□□□□ -0.69
RNF213-210ENST00000560083 PBRM1Q86U86 1689 aa10.76□□□□□ -0.69
RNF213-210ENST00000560083 SYNJ2O15056 1496 aa10.73□□□□□ -0.69
RNF213-210ENST00000560083 ADAMTS12P58397 1594 aa10.72□□□□□ -0.69
RNF213-210ENST00000560083 EFCAB5A4FU69 1503 aa10.72□□□□□ -0.69
RNF213-210ENST00000560083 UBTFP17480 764 aaKnown RBP10.72□□□□□ -0.69
RNF213-210ENST00000560083 EIF4G3O43432 1585 aaKnown RBP10.72□□□□□ -0.69
RNF213-210ENST00000560083 TDRD9Q8NDG6 1382 aaKnown RBP10.7□□□□□ -0.7
RNF213-210ENST00000560083 CHMP7Q8WUX9 453 aaPredicted RBP10.66□□□□□ -0.7
RNF213-210ENST00000560083 KIAA0586Q9BVV6 1533 aa10.66□□□□□ -0.7
RNF213-210ENST00000560083 CTTNBP2Q8WZ74 1663 aa10.65□□□□□ -0.7
RNF213-210ENST00000560083 SNAPC4Q5SXM2 1469 aa10.65□□□□□ -0.7
RNF213-210ENST00000560083 GRIN2AQ12879 1464 aa10.65□□□□□ -0.7
RNF213-210ENST00000560083 AQRO60306 1485 aaKnown RBP eCLIP10.65□□□□□ -0.711e-6■■■■■ 44.8
RNF213-210ENST00000560083 RUSC2Q8N2Y8 1516 aa10.64□□□□□ -0.71
RNF213-210ENST00000560083 EHMT2Q96KQ7 1210 aa10.64□□□□□ -0.71
RNF213-210ENST00000560083 CARMIL2Q6F5E8 1435 aa10.64□□□□□ -0.71
RNF213-210ENST00000560083 AEBP2Q6ZN18 517 aaPredicted RBP10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms