RNA–Protein interactions for RNA: ENST00000540736.1

STIP1-209, Transcript of stress induced phosphoprotein 1, humanhuman

TSL 2

Gene STIP1, Length 399 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STIP1-209ENST00000540736 NISCHQ9Y2I1 1504 aa14.37□□□□□ -0.11
STIP1-209ENST00000540736 CCDC180Q9P1Z9 1646 aa12.79□□□□□ -0.36
STIP1-209ENST00000540736 ABCC9O60706 1549 aa12.57□□□□□ -0.4
STIP1-209ENST00000540736 NACADO15069 1562 aa12□□□□□ -0.49
STIP1-209ENST00000540736 ZCCHC6Q5VYS8 1495 aaKnown RBP11.99□□□□□ -0.49
STIP1-209ENST00000540736 RB1CC1Q8TDY2 1594 aa11.99□□□□□ -0.49
STIP1-209ENST00000540736 MYO15BQ96JP2 1530 aa11.96□□□□□ -0.49
STIP1-209ENST00000540736 UNC13AQ9UPW8 1703 aa11.94□□□□□ -0.5
STIP1-209ENST00000540736 BICRAQ9NZM4 1560 aa11.9□□□□□ -0.5
STIP1-209ENST00000540736 DCAF1Q9Y4B6 1507 aa11.89□□□□□ -0.51
STIP1-209ENST00000540736 DNAJC5BQ9UF47 199 aa11.81□□□□□ -0.52
STIP1-209ENST00000540736 PABPN1Q86U42 306 aaKnown RBP eCLIP11.71□□□□□ -0.53
STIP1-209ENST00000540736 DCAF8L2P0C7V8 631 aa11.7□□□□□ -0.54
STIP1-209ENST00000540736 SCRIBQ14160 1630 aa11.66□□□□□ -0.54
STIP1-209ENST00000540736 SHROOM4Q9ULL8 1493 aa11.53□□□□□ -0.56
STIP1-209ENST00000540736 EIF4G1Q04637 1599 aaKnown RBP11.45□□□□□ -0.58
STIP1-209ENST00000540736 CC2D2AQ9P2K1 1620 aa11.42□□□□□ -0.58
STIP1-209ENST00000540736 CECR2Q9BXF3 1484 aa11.29□□□□□ -0.6
STIP1-209ENST00000540736 SMARCA4P51532 1647 aa11.17□□□□□ -0.62
STIP1-209ENST00000540736 ATAD2BQ9ULI0 1458 aa11.13□□□□□ -0.63
STIP1-209ENST00000540736 MROH2BQ7Z745 1585 aa11.13□□□□□ -0.63
STIP1-209ENST00000540736 NCAPD3P42695 1498 aa11.12□□□□□ -0.63
STIP1-209ENST00000540736 PEG3Q9GZU2 1588 aa11.11□□□□□ -0.63
STIP1-209ENST00000540736 HMGXB3Q12766 1538 aa11.06□□□□□ -0.64
STIP1-209ENST00000540736 BAZ1AQ9NRL2 1556 aaPredicted RBP11.05□□□□□ -0.64
STIP1-209ENST00000540736 SMARCA2P51531 1590 aa11.01□□□□□ -0.65
STIP1-209ENST00000540736 WIZO95785 1651 aa10.98□□□□□ -0.65
STIP1-209ENST00000540736 NESP48681 1621 aa10.95□□□□□ -0.66
STIP1-209ENST00000540736 BAZ1BQ9UIG0 1483 aaKnown RBP10.93□□□□□ -0.66
STIP1-209ENST00000540736 RSF1Q96T23 1441 aaPredicted RBP10.92□□□□□ -0.66
STIP1-209ENST00000540736 THOC2Q8NI27 1593 aaKnown RBP10.84□□□□□ -0.67
STIP1-209ENST00000540736 TOP2AP11388 1531 aaKnown RBP10.8□□□□□ -0.68
STIP1-209ENST00000540736 KIF21AQ7Z4S6 1674 aa10.8□□□□□ -0.68
STIP1-209ENST00000540736 LAMC3Q9Y6N6 1575 aa10.79□□□□□ -0.68
STIP1-209ENST00000540736 CADPSQ9ULU8 1353 aa10.74□□□□□ -0.69
STIP1-209ENST00000540736 CUX2O14529 1486 aa10.73□□□□□ -0.69
STIP1-209ENST00000540736 CFTRP13569 1480 aa10.72□□□□□ -0.69
STIP1-209ENST00000540736 CCDC88BA6NC98 1476 aa10.69□□□□□ -0.7
STIP1-209ENST00000540736 ERCC6Q03468 1493 aa10.68□□□□□ -0.7
STIP1-209ENST00000540736 WDR62O43379 1518 aa10.67□□□□□ -0.7
STIP1-209ENST00000540736 URB2Q14146 1524 aaKnown RBP10.63□□□□□ -0.71
STIP1-209ENST00000540736 PDS5BQ9NTI5 1447 aa10.62□□□□□ -0.71
STIP1-209ENST00000540736 FANCD2Q9BXW9 1451 aa10.61□□□□□ -0.71
STIP1-209ENST00000540736 MRC2Q9UBG0 1479 aa10.61□□□□□ -0.71
STIP1-209ENST00000540736 PRDM2Q13029 1718 aa10.61□□□□□ -0.71
STIP1-209ENST00000540736 CEP164Q9UPV0 1460 aa10.56□□□□□ -0.72
STIP1-209ENST00000540736 DNAJC5Q9H3Z4 198 aa10.52□□□□□ -0.73
STIP1-209ENST00000540736 TOPBP1Q92547 1522 aa10.48□□□□□ -0.73
STIP1-209ENST00000540736 ZNF608Q9ULD9 1512 aaPredicted RBP10.47□□□□□ -0.73
STIP1-209ENST00000540736 TARBP1Q13395 1621 aaKnown RBP10.47□□□□□ -0.73
STIP1-209ENST00000540736 DNMBPQ6XZF7 1577 aa10.44□□□□□ -0.74
STIP1-209ENST00000540736 CUX1P39880 1505 aa10.44□□□□□ -0.74
STIP1-209ENST00000540736 POLA1P09884 1462 aaPredicted RBP10.41□□□□□ -0.74
STIP1-209ENST00000540736 WDR97A6NE52 1622 aa10.38□□□□□ -0.75
STIP1-209ENST00000540736 EIF4G3O43432 1585 aaKnown RBP10.38□□□□□ -0.75
STIP1-209ENST00000540736 IFT140Q96RY7 1462 aa10.36□□□□□ -0.75
STIP1-209ENST00000540736 RAD54L2Q9Y4B4 1467 aa10.36□□□□□ -0.75
STIP1-209ENST00000540736 FGD5Q6ZNL6 1462 aa10.33□□□□□ -0.76
STIP1-209ENST00000540736 SYNJ1O43426 1573 aa10.32□□□□□ -0.76
STIP1-209ENST00000540736 AQRO60306 1485 aaKnown RBP eCLIP10.32□□□□□ -0.763e-12■■■■□ 25.7
STIP1-209ENST00000540736 SUPT5HO00267 1087 aaKnown RBP10.32□□□□□ -0.76
STIP1-209ENST00000540736 ABCC8Q09428 1581 aa10.31□□□□□ -0.76
STIP1-209ENST00000540736 BIVM-ERCC5R4GMW8 1640 aa10.29□□□□□ -0.76
STIP1-209ENST00000540736 ABCA5Q8WWZ7 1642 aa10.27□□□□□ -0.77
STIP1-209ENST00000540736 CHD1O14646 1710 aa10.26□□□□□ -0.77
STIP1-209ENST00000540736 TOP2BQ02880 1626 aa10.25□□□□□ -0.77
STIP1-209ENST00000540736 TDRD9Q8NDG6 1382 aaKnown RBP10.25□□□□□ -0.77
STIP1-209ENST00000540736 SOGA1O94964 1423 aa10.24□□□□□ -0.77
STIP1-209ENST00000540736 ABCA10Q8WWZ4 1543 aa10.24□□□□□ -0.77
STIP1-209ENST00000540736 SNAPC4Q5SXM2 1469 aa10.21□□□□□ -0.78
STIP1-209ENST00000540736 CLASP1Q7Z460 1538 aa10.21□□□□□ -0.78
STIP1-209ENST00000540736 PBRM1Q86U86 1689 aa10.2□□□□□ -0.78
STIP1-209ENST00000540736 RIMBP3CA6NJZ7 1639 aa10.19□□□□□ -0.78
STIP1-209ENST00000540736 RIMBP3BA6NNM3 1639 aa10.19□□□□□ -0.78
STIP1-209ENST00000540736 RIMBP3Q9UFD9 1639 aa10.19□□□□□ -0.78
STIP1-209ENST00000540736 WRNQ14191 1432 aaPredicted RBP eCLIP10.18□□□□□ -0.786e-7■■■■■ 33.4
STIP1-209ENST00000540736 ARHGEF11O15085 1522 aa10.16□□□□□ -0.78
STIP1-209ENST00000540736 GRIN2BQ13224 1484 aa10.16□□□□□ -0.78
STIP1-209ENST00000540736 ADAMTS12P58397 1594 aa10.15□□□□□ -0.78
STIP1-209ENST00000540736 GAPVD1Q14C86 1478 aa10.15□□□□□ -0.78
STIP1-209ENST00000540736 MAGI1Q96QZ7 1491 aaPredicted RBP10.15□□□□□ -0.78
STIP1-209ENST00000540736 ARAP1Q96P48 1450 aa10.13□□□□□ -0.79
STIP1-209ENST00000540736 OSCARQ8IYS5 282 aa10.13□□□□□ -0.79
STIP1-209ENST00000540736 ERCC6L2Q5T890 1561 aa10.12□□□□□ -0.79
STIP1-209ENST00000540736 SYNJ2O15056 1496 aa10.11□□□□□ -0.79
STIP1-209ENST00000540736 CEP170Q5SW79 1584 aa10.11□□□□□ -0.79
STIP1-209ENST00000540736 NUP160Q12769 1436 aa10.09□□□□□ -0.79
STIP1-209ENST00000540736 ERICH3Q5RHP9 1530 aa10.07□□□□□ -0.8
STIP1-209ENST00000540736 GRIN2AQ12879 1464 aa10.07□□□□□ -0.8
STIP1-209ENST00000540736 SHROOM2Q13796 1616 aa10.07□□□□□ -0.8
STIP1-209ENST00000540736 RUSC2Q8N2Y8 1516 aa10.03□□□□□ -0.8
STIP1-209ENST00000540736 IGF1RP08069 1367 aa10.02□□□□□ -0.8
STIP1-209ENST00000540736 FHAD1B1AJZ9 1412 aa10.02□□□□□ -0.81
STIP1-209ENST00000540736 TRIM41Q8WV44 630 aa9.98□□□□□ -0.81
STIP1-209ENST00000540736 FBLN2P98095 1184 aa9.96□□□□□ -0.82
STIP1-209ENST00000540736 CHMP7Q8WUX9 453 aaPredicted RBP9.95□□□□□ -0.82
STIP1-209ENST00000540736 CUL7Q14999 1698 aa9.93□□□□□ -0.82
STIP1-209ENST00000540736 KIF27Q86VH2 1401 aa9.91□□□□□ -0.82
STIP1-209ENST00000540736 CYB5RLQ6IPT4 315 aa9.91□□□□□ -0.82
STIP1-209ENST00000540736 KIAA0586Q9BVV6 1533 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 103.8 ms