RNA–Protein interactions for RNA: ENST00000368613.8

LRRC27-203, Transcript of leucine rich repeat containing 27, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LRRC27, Length 2,113 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC27-203ENST00000368613 NISCHQ9Y2I1 1504 aa39.05■■■■□ 3.84
LRRC27-203ENST00000368613 CCDC180Q9P1Z9 1646 aa33.91■■■■□ 3.02
LRRC27-203ENST00000368613 ZCCHC6Q5VYS8 1495 aaKnown RBP33.12■■■□□ 2.89
LRRC27-203ENST00000368613 SHROOM4Q9ULL8 1493 aa32.87■■■□□ 2.85
LRRC27-203ENST00000368613 ABCC9O60706 1549 aa32.5■■■□□ 2.79
LRRC27-203ENST00000368613 DCAF8L2P0C7V8 631 aa32.42■■■□□ 2.78
LRRC27-203ENST00000368613 SUPT5HO00267 1087 aaKnown RBP32.29■■■□□ 2.76
LRRC27-203ENST00000368613 DCAF1Q9Y4B6 1507 aa32.29■■■□□ 2.76
LRRC27-203ENST00000368613 MYO15BQ96JP2 1530 aa31.7■■■□□ 2.67
LRRC27-203ENST00000368613 CHIC1Q5VXU3 224 aa31.69■■■□□ 2.66
LRRC27-203ENST00000368613 NACADO15069 1562 aa31.66■■■□□ 2.66
LRRC27-203ENST00000368613 RB1CC1Q8TDY2 1594 aa31.47■■■□□ 2.63
LRRC27-203ENST00000368613 SCRIBQ14160 1630 aa31.35■■■□□ 2.61
LRRC27-203ENST00000368613 HRCP23327 699 aa30.97■■■□□ 2.55
LRRC27-203ENST00000368613 UNC13AQ9UPW8 1703 aa30.92■■■□□ 2.54
LRRC27-203ENST00000368613 RSF1Q96T23 1441 aaPredicted RBP30.85■■■□□ 2.53
LRRC27-203ENST00000368613 PABPN1Q86U42 306 aaKnown RBP eCLIP30.67■■■□□ 2.5
LRRC27-203ENST00000368613 PCGF6Q9BYE7 350 aa30.64■■■□□ 2.49
LRRC27-203ENST00000368613 BICRAQ9NZM4 1560 aa30.6■■■□□ 2.49
LRRC27-203ENST00000368613 LOC105371045A0A1W2PR82 267 aa30.53■■■□□ 2.48
LRRC27-203ENST00000368613 CECR2Q9BXF3 1484 aa30.36■■■□□ 2.45
LRRC27-203ENST00000368613 TRIM26Q12899 539 aaPredicted RBP30.28■■■□□ 2.44
LRRC27-203ENST00000368613 MROH2BQ7Z745 1585 aa30.25■■■□□ 2.43
LRRC27-203ENST00000368613 TRIM41Q8WV44 630 aa30.24■■■□□ 2.43
LRRC27-203ENST00000368613 BAZ1AQ9NRL2 1556 aaPredicted RBP30.12■■■□□ 2.41
LRRC27-203ENST00000368613 WIZO95785 1651 aa30.1■■■□□ 2.41
LRRC27-203ENST00000368613 PPARGC1BQ86YN6 1023 aaKnown RBP29.98■■■□□ 2.39
LRRC27-203ENST00000368613 EIF4G1Q04637 1599 aaKnown RBP29.98■■■□□ 2.39
LRRC27-203ENST00000368613 SMARCA4P51532 1647 aa29.96■■■□□ 2.39
LRRC27-203ENST00000368613 ZEB1P37275 1124 aaPredicted RBP29.81■■■□□ 2.36
LRRC27-203ENST00000368613 TOP2AP11388 1531 aaKnown RBP29.79■■■□□ 2.36
LRRC27-203ENST00000368613 FAM9AQ8IZU1 332 aaPredicted RBP29.75■■■□□ 2.35
LRRC27-203ENST00000368613 SMARCA2P51531 1590 aa29.58■■■□□ 2.33
LRRC27-203ENST00000368613 ATAD2BQ9ULI0 1458 aa29.53■■■□□ 2.32
LRRC27-203ENST00000368613 PEG3Q9GZU2 1588 aa29.52■■■□□ 2.32
LRRC27-203ENST00000368613 CCDC88BA6NC98 1476 aa29.51■■■□□ 2.31
LRRC27-203ENST00000368613 ABCC8Q09428 1581 aa29.38■■■□□ 2.29
LRRC27-203ENST00000368613 BAZ1BQ9UIG0 1483 aaKnown RBP29.35■■■□□ 2.29
LRRC27-203ENST00000368613 CC2D2AQ9P2K1 1620 aa29.33■■■□□ 2.29
LRRC27-203ENST00000368613 WRNQ14191 1432 aaPredicted RBP eCLIP29.32■■■□□ 2.28
LRRC27-203ENST00000368613 EEA1Q15075 1411 aa29.32■■■□□ 2.28
LRRC27-203ENST00000368613 EHMT2Q96KQ7 1210 aa29.27■■■□□ 2.28
LRRC27-203ENST00000368613 NCAPD3P42695 1498 aa29.26■■■□□ 2.27
LRRC27-203ENST00000368613 HMGXB3Q12766 1538 aa29.17■■■□□ 2.26
LRRC27-203ENST00000368613 TNIKQ9UKE5 1360 aa29.16■■■□□ 2.26
LRRC27-203ENST00000368613 CEP162Q5TB80 1403 aa29.13■■■□□ 2.25
LRRC27-203ENST00000368613 SOGA1O94964 1423 aa29.1■■■□□ 2.25
LRRC27-203ENST00000368613 GOLGA3Q08378 1498 aa28.99■■■□□ 2.23
LRRC27-203ENST00000368613 CSRNP3Q8WYN3 585 aa28.99■■■□□ 2.23
LRRC27-203ENST00000368613 DNAJC5BQ9UF47 199 aa28.93■■■□□ 2.22
LRRC27-203ENST00000368613 RUSC2Q8N2Y8 1516 aa28.92■■■□□ 2.22
LRRC27-203ENST00000368613 KIF21BO75037 1637 aa28.91■■■□□ 2.22
LRRC27-203ENST00000368613 SYNJ1O43426 1573 aa28.85■■■□□ 2.21
LRRC27-203ENST00000368613 CEP164Q9UPV0 1460 aa28.83■■■□□ 2.21
LRRC27-203ENST00000368613 CCER1Q8TC90 406 aaPredicted RBP28.82■■■□□ 2.2
LRRC27-203ENST00000368613 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.8■■■□□ 2.2
LRRC27-203ENST00000368613 UBTFP17480 764 aaKnown RBP28.73■■■□□ 2.19
LRRC27-203ENST00000368613 TOP2BQ02880 1626 aa28.61■■■□□ 2.17
LRRC27-203ENST00000368613 CFTRP13569 1480 aa28.57■■■□□ 2.16
LRRC27-203ENST00000368613 BIVM-ERCC5R4GMW8 1640 aa28.57■■■□□ 2.16
LRRC27-203ENST00000368613 CLIP1P30622 1438 aa28.57■■■□□ 2.16
LRRC27-203ENST00000368613 VPS8Q8N3P4 1428 aa28.54■■■□□ 2.16
LRRC27-203ENST00000368613 CADPSQ9ULU8 1353 aa28.54■■■□□ 2.16
LRRC27-203ENST00000368613 NESP48681 1621 aa28.48■■■□□ 2.15
LRRC27-203ENST00000368613 SCAF1Q9H7N4 1312 aaKnown RBP28.46■■■□□ 2.15
LRRC27-203ENST00000368613 RAPGEF2Q9Y4G8 1499 aa28.45■■■□□ 2.14
LRRC27-203ENST00000368613 TTBK1Q5TCY1 1321 aaPredicted RBP28.43■■■□□ 2.14
LRRC27-203ENST00000368613 ERICH3Q5RHP9 1530 aa28.43■■■□□ 2.14
LRRC27-203ENST00000368613 DIEXFQ68CQ4 756 aaKnown RBP28.37■■■□□ 2.13
LRRC27-203ENST00000368613 PRDM2Q13029 1718 aa28.36■■■□□ 2.13
LRRC27-203ENST00000368613 PELP1Q8IZL8 1130 aaKnown RBP28.34■■■□□ 2.13
LRRC27-203ENST00000368613 PRXQ9BXM0 1461 aa28.31■■■□□ 2.12
LRRC27-203ENST00000368613 LAMC3Q9Y6N6 1575 aa28.28■■■□□ 2.12
LRRC27-203ENST00000368613 ACIN1Q9UKV3 1341 aaKnown RBP28.28■■■□□ 2.12
LRRC27-203ENST00000368613 FANCD2Q9BXW9 1451 aa28.25■■■□□ 2.11
LRRC27-203ENST00000368613 ZNF316A6NFI3 1004 aaPredicted RBP28.22■■■□□ 2.11
LRRC27-203ENST00000368613 APLP2Q06481 763 aa28.2■■■□□ 2.1
LRRC27-203ENST00000368613 CUX1P39880 1505 aa28.19■■■□□ 2.1
LRRC27-203ENST00000368613 CENPBP07199 599 aaPredicted RBP28.16■■■□□ 2.1
LRRC27-203ENST00000368613 ARAP1Q96P48 1450 aa28.14■■■□□ 2.1
LRRC27-203ENST00000368613 NEUROD1Q13562 356 aa28.1■■■□□ 2.09
LRRC27-203ENST00000368613 KIF27Q86VH2 1401 aa28.1■■■□□ 2.09
LRRC27-203ENST00000368613 PDS5BQ9NTI5 1447 aa28.1■■■□□ 2.09
LRRC27-203ENST00000368613 HNRNPUL2Q1KMD3 747 aaKnown RBP28.09■■■□□ 2.09
LRRC27-203ENST00000368613 KIF21AQ7Z4S6 1674 aa28.07■■■□□ 2.08
LRRC27-203ENST00000368613 CLSPNQ9HAW4 1339 aa28.03■■■□□ 2.08
LRRC27-203ENST00000368613 RRBP1Q9P2E9 1410 aaKnown RBP27.93■■■□□ 2.06
LRRC27-203ENST00000368613 URB2Q14146 1524 aaKnown RBP27.93■■■□□ 2.06
LRRC27-203ENST00000368613 TOPBP1Q92547 1522 aa27.91■■■□□ 2.06
LRRC27-203ENST00000368613 DNMBPQ6XZF7 1577 aa27.9■■■□□ 2.06
LRRC27-203ENST00000368613 FGD5Q6ZNL6 1462 aa27.88■■■□□ 2.05
LRRC27-203ENST00000368613 CUX2O14529 1486 aa27.88■■■□□ 2.05
LRRC27-203ENST00000368613 ARHGAP35Q9NRY4 1499 aa27.87■■■□□ 2.05
LRRC27-203ENST00000368613 DHX57Q6P158 1386 aaKnown RBP27.83■■■□□ 2.05
LRRC27-203ENST00000368613 RANGAP1P46060 587 aaPredicted RBP27.83■■■□□ 2.05
LRRC27-203ENST00000368613 ERCC6Q03468 1493 aa27.83■■■□□ 2.04
LRRC27-203ENST00000368613 GTF3C3Q9Y5Q9 886 aa27.82■■■□□ 2.04
LRRC27-203ENST00000368613 MAP3K1Q13233 1512 aa27.81■■■□□ 2.04
LRRC27-203ENST00000368613 POLA1P09884 1462 aaPredicted RBP27.78■■■□□ 2.04
LRRC27-203ENST00000368613 KANK4Q5T7N3 995 aaPredicted RBP27.77■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms