RNA–Protein interactions for RNA: ENST00000543847.1

STIP1-211, Transcript of stress induced phosphoprotein 1, humanhuman

TSL 1 (best) BASIC

Gene STIP1, Length 772 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STIP1-211ENST00000543847 NISCHQ9Y2I1 1504 aa23.92■■□□□ 1.42
STIP1-211ENST00000543847 CCDC180Q9P1Z9 1646 aa20.83■□□□□ 0.93
STIP1-211ENST00000543847 ZCCHC6Q5VYS8 1495 aaKnown RBP20.06■□□□□ 0.8
STIP1-211ENST00000543847 CHIC1Q5VXU3 224 aa19.89■□□□□ 0.77
STIP1-211ENST00000543847 DCAF1Q9Y4B6 1507 aa19.85■□□□□ 0.77
STIP1-211ENST00000543847 DCAF8L2P0C7V8 631 aa19.82■□□□□ 0.76
STIP1-211ENST00000543847 AEBP2Q6ZN18 517 aaPredicted RBP19.8■□□□□ 0.76
STIP1-211ENST00000543847 ABCC9O60706 1549 aa19.78■□□□□ 0.76
STIP1-211ENST00000543847 MYO15BQ96JP2 1530 aa19.68■□□□□ 0.74
STIP1-211ENST00000543847 NACADO15069 1562 aa19.53■□□□□ 0.72
STIP1-211ENST00000543847 SHROOM4Q9ULL8 1493 aa19.37■□□□□ 0.69
STIP1-211ENST00000543847 RB1CC1Q8TDY2 1594 aa19.34■□□□□ 0.69
STIP1-211ENST00000543847 SCRIBQ14160 1630 aa19.08■□□□□ 0.65
STIP1-211ENST00000543847 SUPT5HO00267 1087 aaKnown RBP18.69■□□□□ 0.58
STIP1-211ENST00000543847 PABPN1Q86U42 306 aaKnown RBP eCLIP18.68■□□□□ 0.58
STIP1-211ENST00000543847 BICRAQ9NZM4 1560 aa18.65■□□□□ 0.58
STIP1-211ENST00000543847 UNC13AQ9UPW8 1703 aa18.65■□□□□ 0.58
STIP1-211ENST00000543847 RSF1Q96T23 1441 aaPredicted RBP18.54■□□□□ 0.56
STIP1-211ENST00000543847 CECR2Q9BXF3 1484 aa18.53■□□□□ 0.56
STIP1-211ENST00000543847 BAZ1AQ9NRL2 1556 aaPredicted RBP18.5■□□□□ 0.55
STIP1-211ENST00000543847 MROH2BQ7Z745 1585 aa18.42■□□□□ 0.54
STIP1-211ENST00000543847 SMARCA4P51532 1647 aa18.33■□□□□ 0.52
STIP1-211ENST00000543847 PEG3Q9GZU2 1588 aa18.18■□□□□ 0.5
STIP1-211ENST00000543847 WIZO95785 1651 aa18.18■□□□□ 0.5
STIP1-211ENST00000543847 SMARCA2P51531 1590 aa18.15■□□□□ 0.5
STIP1-211ENST00000543847 ATAD2BQ9ULI0 1458 aa18.14■□□□□ 0.5
STIP1-211ENST00000543847 EIF4G1Q04637 1599 aaKnown RBP18.14■□□□□ 0.49
STIP1-211ENST00000543847 TOP2AP11388 1531 aaKnown RBP18.11■□□□□ 0.49
STIP1-211ENST00000543847 NCAPD3P42695 1498 aa18.06■□□□□ 0.48
STIP1-211ENST00000543847 BAZ1BQ9UIG0 1483 aaKnown RBP18.03■□□□□ 0.48
STIP1-211ENST00000543847 HMGXB3Q12766 1538 aa17.96■□□□□ 0.47
STIP1-211ENST00000543847 CCDC88BA6NC98 1476 aa17.94■□□□□ 0.46
STIP1-211ENST00000543847 DNAJC5BQ9UF47 199 aa17.91■□□□□ 0.46
STIP1-211ENST00000543847 CC2D2AQ9P2K1 1620 aa17.87■□□□□ 0.45
STIP1-211ENST00000543847 TRIM41Q8WV44 630 aa17.66■□□□□ 0.42
STIP1-211ENST00000543847 CFTRP13569 1480 aa17.6■□□□□ 0.41
STIP1-211ENST00000543847 CADPSQ9ULU8 1353 aa17.59■□□□□ 0.41
STIP1-211ENST00000543847 PHF23Q9BUL5 403 aaPredicted RBP17.57■□□□□ 0.4
STIP1-211ENST00000543847 WRNQ14191 1432 aaPredicted RBP eCLIP17.47■□□□□ 0.396e-7■■■■■ 33.4
STIP1-211ENST00000543847 ABCC8Q09428 1581 aa17.41■□□□□ 0.38
STIP1-211ENST00000543847 LAMC3Q9Y6N6 1575 aa17.39■□□□□ 0.37
STIP1-211ENST00000543847 PDS5BQ9NTI5 1447 aa17.36■□□□□ 0.37
STIP1-211ENST00000543847 FANCD2Q9BXW9 1451 aa17.34■□□□□ 0.37
STIP1-211ENST00000543847 NESP48681 1621 aa17.29■□□□□ 0.36
STIP1-211ENST00000543847 EEA1Q15075 1411 aa17.28■□□□□ 0.36
STIP1-211ENST00000543847 PRDM2Q13029 1718 aa17.27■□□□□ 0.35
STIP1-211ENST00000543847 TOP2BQ02880 1626 aa17.26■□□□□ 0.35
STIP1-211ENST00000543847 SYNJ1O43426 1573 aa17.26■□□□□ 0.35
STIP1-211ENST00000543847 CEP164Q9UPV0 1460 aa17.24■□□□□ 0.35
STIP1-211ENST00000543847 CUX1P39880 1505 aa17.23■□□□□ 0.35
STIP1-211ENST00000543847 FAM9AQ8IZU1 332 aaPredicted RBP17.22■□□□□ 0.35
STIP1-211ENST00000543847 BIVM-ERCC5R4GMW8 1640 aa17.2■□□□□ 0.34
STIP1-211ENST00000543847 CSRNP3Q8WYN3 585 aa17.17■□□□□ 0.34
STIP1-211ENST00000543847 SOGA1O94964 1423 aa17.16■□□□□ 0.34
STIP1-211ENST00000543847 LOC105371045A0A1W2PR82 267 aa17.13■□□□□ 0.33
STIP1-211ENST00000543847 DNMBPQ6XZF7 1577 aa17.13■□□□□ 0.33
STIP1-211ENST00000543847 TOPBP1Q92547 1522 aa17.11■□□□□ 0.33
STIP1-211ENST00000543847 KIF27Q86VH2 1401 aa17.09■□□□□ 0.33
STIP1-211ENST00000543847 FGD5Q6ZNL6 1462 aa17.08■□□□□ 0.32
STIP1-211ENST00000543847 URB2Q14146 1524 aaKnown RBP17.07■□□□□ 0.32
STIP1-211ENST00000543847 MRC2Q9UBG0 1479 aa17.06■□□□□ 0.32
STIP1-211ENST00000543847 ERCC6Q03468 1493 aa17.05■□□□□ 0.32
STIP1-211ENST00000543847 RUSC2Q8N2Y8 1516 aa17.04■□□□□ 0.32
STIP1-211ENST00000543847 POLA1P09884 1462 aaPredicted RBP17.01■□□□□ 0.31
STIP1-211ENST00000543847 CUX2O14529 1486 aa16.99■□□□□ 0.31
STIP1-211ENST00000543847 KIF21AQ7Z4S6 1674 aa16.98■□□□□ 0.31
STIP1-211ENST00000543847 ABCA10Q8WWZ4 1543 aa16.98■□□□□ 0.31
STIP1-211ENST00000543847 GOLGA3Q08378 1498 aa16.93■□□□□ 0.3
STIP1-211ENST00000543847 RAD54L2Q9Y4B4 1467 aa16.93■□□□□ 0.3
STIP1-211ENST00000543847 WDR62O43379 1518 aa16.93■□□□□ 0.3
STIP1-211ENST00000543847 IGF1RP08069 1367 aa16.92■□□□□ 0.3
STIP1-211ENST00000543847 TNIKQ9UKE5 1360 aa16.92■□□□□ 0.3
STIP1-211ENST00000543847 UBTFP17480 764 aaKnown RBP16.92■□□□□ 0.3
STIP1-211ENST00000543847 EHMT2Q96KQ7 1210 aa16.9■□□□□ 0.3
STIP1-211ENST00000543847 PRXQ9BXM0 1461 aa16.9■□□□□ 0.3
STIP1-211ENST00000543847 KIF21BO75037 1637 aa16.89■□□□□ 0.29
STIP1-211ENST00000543847 IFT140Q96RY7 1462 aa16.88■□□□□ 0.29
STIP1-211ENST00000543847 CARMIL1Q5VZK9 1371 aa16.85■□□□□ 0.29
STIP1-211ENST00000543847 ERICH3Q5RHP9 1530 aa16.85■□□□□ 0.29
STIP1-211ENST00000543847 TDRD9Q8NDG6 1382 aaKnown RBP16.84■□□□□ 0.29
STIP1-211ENST00000543847 GAPVD1Q14C86 1478 aa16.82■□□□□ 0.28
STIP1-211ENST00000543847 RAPGEF2Q9Y4G8 1499 aa16.81■□□□□ 0.28
STIP1-211ENST00000543847 THOC2Q8NI27 1593 aaKnown RBP16.81■□□□□ 0.28
STIP1-211ENST00000543847 TARBP1Q13395 1621 aaKnown RBP16.8■□□□□ 0.28
STIP1-211ENST00000543847 WDR97A6NE52 1622 aa16.77■□□□□ 0.27
STIP1-211ENST00000543847 CEP162Q5TB80 1403 aa16.75■□□□□ 0.27
STIP1-211ENST00000543847 ABCA5Q8WWZ7 1642 aa16.74■□□□□ 0.27
STIP1-211ENST00000543847 GRIN2BQ13224 1484 aa16.73■□□□□ 0.27
STIP1-211ENST00000543847 AQRO60306 1485 aaKnown RBP eCLIP16.72■□□□□ 0.276e-7■■■■□ 21.6
STIP1-211ENST00000543847 CUL7Q14999 1698 aa16.71■□□□□ 0.27
STIP1-211ENST00000543847 FHAD1B1AJZ9 1412 aa16.69■□□□□ 0.26
STIP1-211ENST00000543847 SENP3Q9H4L4 574 aaPredicted RBP16.68■□□□□ 0.26
STIP1-211ENST00000543847 CLIP1P30622 1438 aa16.67■□□□□ 0.26
STIP1-211ENST00000543847 ZNF608Q9ULD9 1512 aaPredicted RBP16.66■□□□□ 0.26
STIP1-211ENST00000543847 MAGI1Q96QZ7 1491 aaPredicted RBP16.6■□□□□ 0.25
STIP1-211ENST00000543847 EIF4G3O43432 1585 aaKnown RBP16.56■□□□□ 0.24
STIP1-211ENST00000543847 SNAPC4Q5SXM2 1469 aa16.55■□□□□ 0.24
STIP1-211ENST00000543847 RANGAP1P46060 587 aaPredicted RBP16.55■□□□□ 0.24
STIP1-211ENST00000543847 CHMP7Q8WUX9 453 aaPredicted RBP16.55■□□□□ 0.24
STIP1-211ENST00000543847 PBRM1Q86U86 1689 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms