RNA–Protein interactions for RNA: ENST00000453771.5

ZC3H11A-206, Transcript of zinc finger CCCH-type containing 11A, humanhuman

TSL 5

Gene ZC3H11A, Length 1,892 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H11A-206ENST00000453771 NISCHQ9Y2I1 1504 aa24.94■■□□□ 1.58
ZC3H11A-206ENST00000453771 CCDC180Q9P1Z9 1646 aa21.69■■□□□ 1.06
ZC3H11A-206ENST00000453771 ZCCHC6Q5VYS8 1495 aaKnown RBP21.05■□□□□ 0.96
ZC3H11A-206ENST00000453771 ABCC9O60706 1549 aa20.81■□□□□ 0.92
ZC3H11A-206ENST00000453771 DCAF1Q9Y4B6 1507 aa20.69■□□□□ 0.9
ZC3H11A-206ENST00000453771 SHROOM4Q9ULL8 1493 aa20.49■□□□□ 0.87
ZC3H11A-206ENST00000453771 DCAF8L2P0C7V8 631 aa20.3■□□□□ 0.84
ZC3H11A-206ENST00000453771 MYO15BQ96JP2 1530 aa20.3■□□□□ 0.84
ZC3H11A-206ENST00000453771 NACADO15069 1562 aa20.22■□□□□ 0.83
ZC3H11A-206ENST00000453771 RB1CC1Q8TDY2 1594 aa20.16■□□□□ 0.82
ZC3H11A-206ENST00000453771 SUPT5HO00267 1087 aaKnown RBP19.91■□□□□ 0.78
ZC3H11A-206ENST00000453771 UNC13AQ9UPW8 1703 aa19.91■□□□□ 0.78
ZC3H11A-206ENST00000453771 SCRIBQ14160 1630 aa19.89■□□□□ 0.77
ZC3H11A-206ENST00000453771 BICRAQ9NZM4 1560 aa19.64■□□□□ 0.73
ZC3H11A-206ENST00000453771 PABPN1Q86U42 306 aaKnown RBP eCLIP19.46■□□□□ 0.71
ZC3H11A-206ENST00000453771 RSF1Q96T23 1441 aaPredicted RBP19.45■□□□□ 0.7
ZC3H11A-206ENST00000453771 CHIC1Q5VXU3 224 aa19.29■□□□□ 0.68
ZC3H11A-206ENST00000453771 BAZ1AQ9NRL2 1556 aaPredicted RBP19.27■□□□□ 0.68
ZC3H11A-206ENST00000453771 CECR2Q9BXF3 1484 aa19.27■□□□□ 0.68
ZC3H11A-206ENST00000453771 MROH2BQ7Z745 1585 aa19.24■□□□□ 0.67
ZC3H11A-206ENST00000453771 WIZO95785 1651 aa19.15■□□□□ 0.66
ZC3H11A-206ENST00000453771 SMARCA4P51532 1647 aa19.12■□□□□ 0.65
ZC3H11A-206ENST00000453771 EIF4G1Q04637 1599 aaKnown RBP19.05■□□□□ 0.64
ZC3H11A-206ENST00000453771 TOP2AP11388 1531 aaKnown RBP19■□□□□ 0.63
ZC3H11A-206ENST00000453771 PEG3Q9GZU2 1588 aa18.89■□□□□ 0.61
ZC3H11A-206ENST00000453771 CC2D2AQ9P2K1 1620 aa18.88■□□□□ 0.61
ZC3H11A-206ENST00000453771 SMARCA2P51531 1590 aa18.82■□□□□ 0.6
ZC3H11A-206ENST00000453771 DNAJC5BQ9UF47 199 aa18.77■□□□□ 0.6
ZC3H11A-206ENST00000453771 TRIM41Q8WV44 630 aa18.75■□□□□ 0.59
ZC3H11A-206ENST00000453771 ATAD2BQ9ULI0 1458 aa18.74■□□□□ 0.59
ZC3H11A-206ENST00000453771 CCDC88BA6NC98 1476 aa18.73■□□□□ 0.59
ZC3H11A-206ENST00000453771 NCAPD3P42695 1498 aa18.64■□□□□ 0.57
ZC3H11A-206ENST00000453771 HMGXB3Q12766 1538 aa18.64■□□□□ 0.57
ZC3H11A-206ENST00000453771 BAZ1BQ9UIG0 1483 aaKnown RBP18.6■□□□□ 0.57
ZC3H11A-206ENST00000453771 LOC105371045A0A1W2PR82 267 aa18.5■□□□□ 0.55
ZC3H11A-206ENST00000453771 ABCC8Q09428 1581 aa18.47■□□□□ 0.55
ZC3H11A-206ENST00000453771 EEA1Q15075 1411 aa18.35■□□□□ 0.53
ZC3H11A-206ENST00000453771 FAM9AQ8IZU1 332 aaPredicted RBP18.34■□□□□ 0.53
ZC3H11A-206ENST00000453771 WRNQ14191 1432 aaPredicted RBP eCLIP18.33■□□□□ 0.53
ZC3H11A-206ENST00000453771 SYNJ1O43426 1573 aa18.25■□□□□ 0.51
ZC3H11A-206ENST00000453771 PRDM2Q13029 1718 aa18.24■□□□□ 0.51
ZC3H11A-206ENST00000453771 BIVM-ERCC5R4GMW8 1640 aa18.2■□□□□ 0.5
ZC3H11A-206ENST00000453771 TOP2BQ02880 1626 aa18.19■□□□□ 0.5
ZC3H11A-206ENST00000453771 NESP48681 1621 aa18.17■□□□□ 0.5
ZC3H11A-206ENST00000453771 SOGA1O94964 1423 aa18.16■□□□□ 0.5
ZC3H11A-206ENST00000453771 CFTRP13569 1480 aa18.14■□□□□ 0.49
ZC3H11A-206ENST00000453771 PCGF6Q9BYE7 350 aa18.13■□□□□ 0.49
ZC3H11A-206ENST00000453771 LAMC3Q9Y6N6 1575 aa18.13■□□□□ 0.49
ZC3H11A-206ENST00000453771 KIF21BO75037 1637 aa18.1■□□□□ 0.49
ZC3H11A-206ENST00000453771 TRIM26Q12899 539 aaPredicted RBP18.1■□□□□ 0.49
ZC3H11A-206ENST00000453771 CADPSQ9ULU8 1353 aa18.1■□□□□ 0.49
ZC3H11A-206ENST00000453771 CSRNP3Q8WYN3 585 aa18.09■□□□□ 0.49
ZC3H11A-206ENST00000453771 GOLGA3Q08378 1498 aa18.09■□□□□ 0.49
ZC3H11A-206ENST00000453771 TNIKQ9UKE5 1360 aa18.07■□□□□ 0.48
ZC3H11A-206ENST00000453771 RUSC2Q8N2Y8 1516 aa18.06■□□□□ 0.48
ZC3H11A-206ENST00000453771 CEP164Q9UPV0 1460 aa18.05■□□□□ 0.48
ZC3H11A-206ENST00000453771 KIF21AQ7Z4S6 1674 aa18.02■□□□□ 0.48
ZC3H11A-206ENST00000453771 EHMT2Q96KQ7 1210 aa18.01■□□□□ 0.47
ZC3H11A-206ENST00000453771 CEP162Q5TB80 1403 aa17.99■□□□□ 0.47
ZC3H11A-206ENST00000453771 CUX1P39880 1505 aa17.99■□□□□ 0.47
ZC3H11A-206ENST00000453771 HRCP23327 699 aa17.99■□□□□ 0.47
ZC3H11A-206ENST00000453771 FANCD2Q9BXW9 1451 aa17.93■□□□□ 0.46
ZC3H11A-206ENST00000453771 PDS5BQ9NTI5 1447 aa17.91■□□□□ 0.46
ZC3H11A-206ENST00000453771 ERICH3Q5RHP9 1530 aa17.9■□□□□ 0.46
ZC3H11A-206ENST00000453771 UBTFP17480 764 aaKnown RBP17.88■□□□□ 0.45
ZC3H11A-206ENST00000453771 KIF27Q86VH2 1401 aa17.85■□□□□ 0.45
ZC3H11A-206ENST00000453771 THOC2Q8NI27 1593 aaKnown RBP17.85■□□□□ 0.45
ZC3H11A-206ENST00000453771 ERCC6Q03468 1493 aa17.84■□□□□ 0.45
ZC3H11A-206ENST00000453771 PRXQ9BXM0 1461 aa17.81■□□□□ 0.44
ZC3H11A-206ENST00000453771 RAPGEF2Q9Y4G8 1499 aa17.81■□□□□ 0.44
ZC3H11A-206ENST00000453771 URB2Q14146 1524 aaKnown RBP17.78■□□□□ 0.44
ZC3H11A-206ENST00000453771 CLIP1P30622 1438 aa17.77■□□□□ 0.43
ZC3H11A-206ENST00000453771 DNMBPQ6XZF7 1577 aa17.76■□□□□ 0.43
ZC3H11A-206ENST00000453771 MRC2Q9UBG0 1479 aa17.76■□□□□ 0.43
ZC3H11A-206ENST00000453771 FGD5Q6ZNL6 1462 aa17.74■□□□□ 0.43
ZC3H11A-206ENST00000453771 WDR62O43379 1518 aa17.74■□□□□ 0.43
ZC3H11A-206ENST00000453771 TOPBP1Q92547 1522 aa17.71■□□□□ 0.43
ZC3H11A-206ENST00000453771 VPS8Q8N3P4 1428 aa17.69■□□□□ 0.42
ZC3H11A-206ENST00000453771 CUX2O14529 1486 aa17.69■□□□□ 0.42
ZC3H11A-206ENST00000453771 ZEB1P37275 1124 aaPredicted RBP17.66■□□□□ 0.42
ZC3H11A-206ENST00000453771 ABCA10Q8WWZ4 1543 aa17.61■□□□□ 0.41
ZC3H11A-206ENST00000453771 POLA1P09884 1462 aaPredicted RBP17.6■□□□□ 0.41
ZC3H11A-206ENST00000453771 WDR97A6NE52 1622 aa17.59■□□□□ 0.41
ZC3H11A-206ENST00000453771 PPARGC1BQ86YN6 1023 aaKnown RBP17.58■□□□□ 0.4
ZC3H11A-206ENST00000453771 CUL7Q14999 1698 aa17.57■□□□□ 0.4
ZC3H11A-206ENST00000453771 IGF1RP08069 1367 aa17.57■□□□□ 0.4
ZC3H11A-206ENST00000453771 TARBP1Q13395 1621 aaKnown RBP17.54■□□□□ 0.4
ZC3H11A-206ENST00000453771 ARAP1Q96P48 1450 aa17.54■□□□□ 0.4
ZC3H11A-206ENST00000453771 CARMIL1Q5VZK9 1371 aa17.52■□□□□ 0.39
ZC3H11A-206ENST00000453771 RAD54L2Q9Y4B4 1467 aa17.52■□□□□ 0.39
ZC3H11A-206ENST00000453771 APLP2Q06481 763 aa17.5■□□□□ 0.39
ZC3H11A-206ENST00000453771 ABCA5Q8WWZ7 1642 aa17.47■□□□□ 0.39
ZC3H11A-206ENST00000453771 ARHGAP35Q9NRY4 1499 aa17.46■□□□□ 0.39
ZC3H11A-206ENST00000453771 CTTNBP2Q8WZ74 1663 aa17.45■□□□□ 0.38
ZC3H11A-206ENST00000453771 IFT140Q96RY7 1462 aa17.45■□□□□ 0.38
ZC3H11A-206ENST00000453771 ZNF608Q9ULD9 1512 aaPredicted RBP17.43■□□□□ 0.38
ZC3H11A-206ENST00000453771 EIF4G3O43432 1585 aaKnown RBP17.41■□□□□ 0.38
ZC3H11A-206ENST00000453771 EFCAB5A4FU69 1503 aa17.39■□□□□ 0.37
ZC3H11A-206ENST00000453771 RANGAP1P46060 587 aaPredicted RBP17.39■□□□□ 0.37
ZC3H11A-206ENST00000453771 TTBK1Q5TCY1 1321 aaPredicted RBP17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms