RNA–Protein interactions for RNA: ENST00000472556.5

LRRC27-208, Transcript of leucine rich repeat containing 27, humanhuman

TSL 1 (best)

Gene LRRC27, Length 646 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC27-208ENST00000472556 NISCHQ9Y2I1 1504 aa24.02■■□□□ 1.44
LRRC27-208ENST00000472556 ABCC9O60706 1549 aa21.88■■□□□ 1.09
LRRC27-208ENST00000472556 CCDC180Q9P1Z9 1646 aa21.58■■□□□ 1.04
LRRC27-208ENST00000472556 DNAJC5BQ9UF47 199 aa20.84■□□□□ 0.93
LRRC27-208ENST00000472556 RB1CC1Q8TDY2 1594 aa20.67■□□□□ 0.9
LRRC27-208ENST00000472556 NACADO15069 1562 aa20.48■□□□□ 0.87
LRRC27-208ENST00000472556 PABPN1Q86U42 306 aaKnown RBP eCLIP20.36■□□□□ 0.85
LRRC27-208ENST00000472556 DCAF8L2P0C7V8 631 aa20.32■□□□□ 0.84
LRRC27-208ENST00000472556 UNC13AQ9UPW8 1703 aa20.19■□□□□ 0.82
LRRC27-208ENST00000472556 BICRAQ9NZM4 1560 aa20.17■□□□□ 0.82
LRRC27-208ENST00000472556 MYO15BQ96JP2 1530 aa20.16■□□□□ 0.82
LRRC27-208ENST00000472556 CHIC1Q5VXU3 224 aa20.06■□□□□ 0.8
LRRC27-208ENST00000472556 AEBP2Q6ZN18 517 aaPredicted RBP19.98■□□□□ 0.79
LRRC27-208ENST00000472556 ZCCHC6Q5VYS8 1495 aaKnown RBP19.86■□□□□ 0.77
LRRC27-208ENST00000472556 DCAF1Q9Y4B6 1507 aa19.81■□□□□ 0.76
LRRC27-208ENST00000472556 SHROOM4Q9ULL8 1493 aa19.79■□□□□ 0.76
LRRC27-208ENST00000472556 CC2D2AQ9P2K1 1620 aa19.73■□□□□ 0.75
LRRC27-208ENST00000472556 CECR2Q9BXF3 1484 aa19.73■□□□□ 0.75
LRRC27-208ENST00000472556 SCRIBQ14160 1630 aa19.68■□□□□ 0.74
LRRC27-208ENST00000472556 EIF4G1Q04637 1599 aaKnown RBP19.64■□□□□ 0.73
LRRC27-208ENST00000472556 DNAJC5Q9H3Z4 198 aa19.35■□□□□ 0.69
LRRC27-208ENST00000472556 NCAPD3P42695 1498 aa18.97■□□□□ 0.63
LRRC27-208ENST00000472556 CUX2O14529 1486 aa18.93■□□□□ 0.62
LRRC27-208ENST00000472556 ATAD2BQ9ULI0 1458 aa18.88■□□□□ 0.61
LRRC27-208ENST00000472556 ERCC6Q03468 1493 aa18.85■□□□□ 0.61
LRRC27-208ENST00000472556 HMGXB3Q12766 1538 aa18.77■□□□□ 0.6
LRRC27-208ENST00000472556 NESP48681 1621 aa18.76■□□□□ 0.59
LRRC27-208ENST00000472556 SMARCA4P51532 1647 aa18.76■□□□□ 0.59
LRRC27-208ENST00000472556 SMARCA2P51531 1590 aa18.75■□□□□ 0.59
LRRC27-208ENST00000472556 BAZ1BQ9UIG0 1483 aaKnown RBP18.64■□□□□ 0.57
LRRC27-208ENST00000472556 BAZ1AQ9NRL2 1556 aaPredicted RBP18.62■□□□□ 0.57
LRRC27-208ENST00000472556 PEG3Q9GZU2 1588 aa18.6■□□□□ 0.57
LRRC27-208ENST00000472556 THOC2Q8NI27 1593 aaKnown RBP18.58■□□□□ 0.56
LRRC27-208ENST00000472556 MROH2BQ7Z745 1585 aa18.53■□□□□ 0.56
LRRC27-208ENST00000472556 LAMC3Q9Y6N6 1575 aa18.51■□□□□ 0.55
LRRC27-208ENST00000472556 KIF21AQ7Z4S6 1674 aa18.43■□□□□ 0.54
LRRC27-208ENST00000472556 PDS5BQ9NTI5 1447 aa18.42■□□□□ 0.54
LRRC27-208ENST00000472556 CADPSQ9ULU8 1353 aa18.37■□□□□ 0.53
LRRC27-208ENST00000472556 MRC2Q9UBG0 1479 aa18.3■□□□□ 0.52
LRRC27-208ENST00000472556 WDR62O43379 1518 aa18.27■□□□□ 0.51
LRRC27-208ENST00000472556 TRIM41Q8WV44 630 aa18.25■□□□□ 0.51
LRRC27-208ENST00000472556 WIZO95785 1651 aa18.25■□□□□ 0.51
LRRC27-208ENST00000472556 CEP164Q9UPV0 1460 aa18.17■□□□□ 0.5
LRRC27-208ENST00000472556 FANCD2Q9BXW9 1451 aa18.14■□□□□ 0.5
LRRC27-208ENST00000472556 CFTRP13569 1480 aa18.12■□□□□ 0.49
LRRC27-208ENST00000472556 RSF1Q96T23 1441 aaPredicted RBP18.06■□□□□ 0.48
LRRC27-208ENST00000472556 URB2Q14146 1524 aaKnown RBP18.04■□□□□ 0.48
LRRC27-208ENST00000472556 OSCARQ8IYS5 282 aa18.03■□□□□ 0.48
LRRC27-208ENST00000472556 TOP2AP11388 1531 aaKnown RBP18■□□□□ 0.47
LRRC27-208ENST00000472556 ZNF608Q9ULD9 1512 aaPredicted RBP17.87■□□□□ 0.45
LRRC27-208ENST00000472556 CCDC88BA6NC98 1476 aa17.83■□□□□ 0.45
LRRC27-208ENST00000472556 IFT140Q96RY7 1462 aa17.82■□□□□ 0.44
LRRC27-208ENST00000472556 RIMBP3CA6NJZ7 1639 aa17.82■□□□□ 0.44
LRRC27-208ENST00000472556 RIMBP3BA6NNM3 1639 aa17.82■□□□□ 0.44
LRRC27-208ENST00000472556 RIMBP3Q9UFD9 1639 aa17.82■□□□□ 0.44
LRRC27-208ENST00000472556 PRDM2Q13029 1718 aa17.79■□□□□ 0.44
LRRC27-208ENST00000472556 TOPBP1Q92547 1522 aa17.78■□□□□ 0.44
LRRC27-208ENST00000472556 ARHGEF11O15085 1522 aa17.76■□□□□ 0.43
LRRC27-208ENST00000472556 PHF23Q9BUL5 403 aaPredicted RBP17.73■□□□□ 0.43
LRRC27-208ENST00000472556 EIF4G3O43432 1585 aaKnown RBP17.7■□□□□ 0.42
LRRC27-208ENST00000472556 ABCC8Q09428 1581 aa17.67■□□□□ 0.42
LRRC27-208ENST00000472556 DNMBPQ6XZF7 1577 aa17.67■□□□□ 0.42
LRRC27-208ENST00000472556 AQRO60306 1485 aaKnown RBP eCLIP17.67■□□□□ 0.42
LRRC27-208ENST00000472556 TARBP1Q13395 1621 aaKnown RBP17.65■□□□□ 0.42
LRRC27-208ENST00000472556 CYB5RLQ6IPT4 315 aa17.64■□□□□ 0.41
LRRC27-208ENST00000472556 POLA1P09884 1462 aaPredicted RBP17.6■□□□□ 0.41
LRRC27-208ENST00000472556 ARAP1Q96P48 1450 aa17.59■□□□□ 0.41
LRRC27-208ENST00000472556 CHD1O14646 1710 aa17.58■□□□□ 0.41
LRRC27-208ENST00000472556 RAD54L2Q9Y4B4 1467 aa17.55■□□□□ 0.4
LRRC27-208ENST00000472556 FBLN2P98095 1184 aa17.53■□□□□ 0.4
LRRC27-208ENST00000472556 TDRD9Q8NDG6 1382 aaKnown RBP17.52■□□□□ 0.39
LRRC27-208ENST00000472556 SOGA1O94964 1423 aa17.5■□□□□ 0.39
LRRC27-208ENST00000472556 TRHP20396 242 aaPredicted RBP17.48■□□□□ 0.39
LRRC27-208ENST00000472556 SNAPC4Q5SXM2 1469 aa17.45■□□□□ 0.38
LRRC27-208ENST00000472556 FGD5Q6ZNL6 1462 aa17.44■□□□□ 0.38
LRRC27-208ENST00000472556 CLASP1Q7Z460 1538 aa17.44■□□□□ 0.38
LRRC27-208ENST00000472556 CUX1P39880 1505 aa17.41■□□□□ 0.38
LRRC27-208ENST00000472556 WDR97A6NE52 1622 aa17.39■□□□□ 0.37
LRRC27-208ENST00000472556 MAGI1Q96QZ7 1491 aaPredicted RBP17.37■□□□□ 0.37
LRRC27-208ENST00000472556 CHMP7Q8WUX9 453 aaPredicted RBP17.37■□□□□ 0.37
LRRC27-208ENST00000472556 GRIN2BQ13224 1484 aa17.37■□□□□ 0.37
LRRC27-208ENST00000472556 SYNJ1O43426 1573 aa17.34■□□□□ 0.37
LRRC27-208ENST00000472556 SYNJ2O15056 1496 aa17.33■□□□□ 0.37
LRRC27-208ENST00000472556 GAPVD1Q14C86 1478 aa17.27■□□□□ 0.36
LRRC27-208ENST00000472556 ABCA10Q8WWZ4 1543 aa17.23■□□□□ 0.35
LRRC27-208ENST00000472556 PBRM1Q86U86 1689 aa17.23■□□□□ 0.35
LRRC27-208ENST00000472556 ABCA5Q8WWZ7 1642 aa17.21■□□□□ 0.35
LRRC27-208ENST00000472556 ERCC6L2Q5T890 1561 aa17.19■□□□□ 0.34
LRRC27-208ENST00000472556 GRIN2AQ12879 1464 aa17.15■□□□□ 0.34
LRRC27-208ENST00000472556 NUP160Q12769 1436 aa17.13■□□□□ 0.33
LRRC27-208ENST00000472556 CEP170Q5SW79 1584 aa17.11■□□□□ 0.33
LRRC27-208ENST00000472556 WRNQ14191 1432 aaPredicted RBP eCLIP17.1■□□□□ 0.33
LRRC27-208ENST00000472556 ADAMTS12P58397 1594 aa17.1■□□□□ 0.33
LRRC27-208ENST00000472556 SHROOM2Q13796 1616 aa17.05■□□□□ 0.32
LRRC27-208ENST00000472556 FHAD1B1AJZ9 1412 aa17.04■□□□□ 0.32
LRRC27-208ENST00000472556 SUPT5HO00267 1087 aaKnown RBP17.03■□□□□ 0.32
LRRC27-208ENST00000472556 TOP2BQ02880 1626 aa17.03■□□□□ 0.32
LRRC27-208ENST00000472556 BIVM-ERCC5R4GMW8 1640 aa17.02■□□□□ 0.31
LRRC27-208ENST00000472556 ERICH3Q5RHP9 1530 aa16.98■□□□□ 0.31
LRRC27-208ENST00000472556 PRG4Q92954 1404 aaPredicted RBP16.96■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms