RNA–Protein interactions for RNA: ENST00000492259.6

RTEL1-TNFRSF6B-203, Transcript of RTEL1-TNFRSF6B readthrough (NMD candidate), humanhuman

APPRIS ALT2 TSL 5

Gene RTEL1-TNFRSF6B, Length 4,824 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTEL1-TNFRSF6B-203ENST00000492259 NISCHQ9Y2I1 1504 aa26■■□□□ 1.75
RTEL1-TNFRSF6B-203ENST00000492259 DCAF8L2P0C7V8 631 aa25.68■■□□□ 1.7
RTEL1-TNFRSF6B-203ENST00000492259 PELP1Q8IZL8 1130 aaKnown RBP25.07■■□□□ 1.6
RTEL1-TNFRSF6B-203ENST00000492259 SUPT5HO00267 1087 aaKnown RBP24.92■■□□□ 1.58
RTEL1-TNFRSF6B-203ENST00000492259 MYT1Q01538 1121 aa24.64■■□□□ 1.54
RTEL1-TNFRSF6B-203ENST00000492259 SHROOM4Q9ULL8 1493 aa24.44■■□□□ 1.5
RTEL1-TNFRSF6B-203ENST00000492259 CENPBP07199 599 aaPredicted RBP24.06■■□□□ 1.44
RTEL1-TNFRSF6B-203ENST00000492259 ERICH6Q7L0X2 663 aa24.04■■□□□ 1.44
RTEL1-TNFRSF6B-203ENST00000492259 PCGF6Q9BYE7 350 aa23.88■■□□□ 1.41
RTEL1-TNFRSF6B-203ENST00000492259 CCER1Q8TC90 406 aaPredicted RBP23.86■■□□□ 1.41
RTEL1-TNFRSF6B-203ENST00000492259 ZEB1P37275 1124 aaPredicted RBP23.63■■□□□ 1.37
RTEL1-TNFRSF6B-203ENST00000492259 EHMT2Q96KQ7 1210 aa23.63■■□□□ 1.37
RTEL1-TNFRSF6B-203ENST00000492259 APLP2Q06481 763 aa23.36■■□□□ 1.33
RTEL1-TNFRSF6B-203ENST00000492259 FAM9AQ8IZU1 332 aaPredicted RBP23.34■■□□□ 1.33
RTEL1-TNFRSF6B-203ENST00000492259 NEFLP07196 543 aa23.27■■□□□ 1.32
RTEL1-TNFRSF6B-203ENST00000492259 HRCP23327 699 aa23.26■■□□□ 1.31
RTEL1-TNFRSF6B-203ENST00000492259 YTHDC1Q96MU7 727 aaKnown RBP23.18■■□□□ 1.3
RTEL1-TNFRSF6B-203ENST00000492259 TRIM41Q8WV44 630 aa23.13■■□□□ 1.29
RTEL1-TNFRSF6B-203ENST00000492259 TTBK1Q5TCY1 1321 aaPredicted RBP23.04■■□□□ 1.28
RTEL1-TNFRSF6B-203ENST00000492259 TRIM26Q12899 539 aaPredicted RBP23.01■■□□□ 1.27
RTEL1-TNFRSF6B-203ENST00000492259 CHIC1Q5VXU3 224 aa22.88■■□□□ 1.25
RTEL1-TNFRSF6B-203ENST00000492259 DAXXQ9UER7 740 aaPredicted RBP22.65■■□□□ 1.22
RTEL1-TNFRSF6B-203ENST00000492259 LOC105371045A0A1W2PR82 267 aa22.64■■□□□ 1.22
RTEL1-TNFRSF6B-203ENST00000492259 PPARGC1BQ86YN6 1023 aaKnown RBP22.61■■□□□ 1.21
RTEL1-TNFRSF6B-203ENST00000492259 UBTFP17480 764 aaKnown RBP22.58■■□□□ 1.21
RTEL1-TNFRSF6B-203ENST00000492259 RTL5Q5HYW3 569 aaPredicted RBP22.53■■□□□ 1.2
RTEL1-TNFRSF6B-203ENST00000492259 RANGAP1P46060 587 aaPredicted RBP22.43■■□□□ 1.18
RTEL1-TNFRSF6B-203ENST00000492259 GTF3C3Q9Y5Q9 886 aa22.24■■□□□ 1.15
RTEL1-TNFRSF6B-203ENST00000492259 ABCC9O60706 1549 aa22.22■■□□□ 1.15
RTEL1-TNFRSF6B-203ENST00000492259 DIEXFQ68CQ4 756 aaKnown RBP22.2■■□□□ 1.14
RTEL1-TNFRSF6B-203ENST00000492259 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.11■■□□□ 1.13
RTEL1-TNFRSF6B-203ENST00000492259 ZNF316A6NFI3 1004 aaPredicted RBP22.1■■□□□ 1.13
RTEL1-TNFRSF6B-203ENST00000492259 ATP1B4Q9UN42 357 aaPredicted RBP22.08■■□□□ 1.13
RTEL1-TNFRSF6B-203ENST00000492259 HNRNPUL2Q1KMD3 747 aaKnown RBP22■■□□□ 1.11
RTEL1-TNFRSF6B-203ENST00000492259 BCANQ96GW7 911 aa21.89■■□□□ 1.09
RTEL1-TNFRSF6B-203ENST00000492259 ACIN1Q9UKV3 1341 aaKnown RBP21.88■■□□□ 1.09
RTEL1-TNFRSF6B-203ENST00000492259 EIF5BO60841 1220 aaKnown RBP21.86■■□□□ 1.09
RTEL1-TNFRSF6B-203ENST00000492259 CDK11AQ9UQ88 783 aaPredicted RBP21.85■■□□□ 1.09
RTEL1-TNFRSF6B-203ENST00000492259 CLSPNQ9HAW4 1339 aa21.84■■□□□ 1.09
RTEL1-TNFRSF6B-203ENST00000492259 PABPN1Q86U42 306 aaKnown RBP eCLIP21.82■■□□□ 1.082e-7■■■■■ 27.6
RTEL1-TNFRSF6B-203ENST00000492259 POLR3GLQ9BT43 218 aa21.79■■□□□ 1.08
RTEL1-TNFRSF6B-203ENST00000492259 ITGAEP38570 1179 aa21.78■■□□□ 1.08
RTEL1-TNFRSF6B-203ENST00000492259 DCAF1Q9Y4B6 1507 aa21.76■■□□□ 1.07
RTEL1-TNFRSF6B-203ENST00000492259 GLIPR1L2Q4G1C9 344 aa21.72■■□□□ 1.07
RTEL1-TNFRSF6B-203ENST00000492259 CNGB1Q14028 1251 aaPredicted RBP21.67■■□□□ 1.06
RTEL1-TNFRSF6B-203ENST00000492259 CCDC180Q9P1Z9 1646 aa21.65■■□□□ 1.06
RTEL1-TNFRSF6B-203ENST00000492259 MYT1LQ9UL68 1186 aa21.59■■□□□ 1.05
RTEL1-TNFRSF6B-203ENST00000492259 ZCCHC6Q5VYS8 1495 aaKnown RBP21.56■■□□□ 1.04
RTEL1-TNFRSF6B-203ENST00000492259 ANP32AP39687 249 aaKnown RBP21.53■■□□□ 1.04
RTEL1-TNFRSF6B-203ENST00000492259 ANP32CO43423 234 aa21.39■■□□□ 1.01
RTEL1-TNFRSF6B-203ENST00000492259 SCAF1Q9H7N4 1312 aaKnown RBP21.35■■□□□ 1.01
RTEL1-TNFRSF6B-203ENST00000492259 CSRNP3Q8WYN3 585 aa21.33■■□□□ 1
RTEL1-TNFRSF6B-203ENST00000492259 SCRIBQ14160 1630 aa21.32■■□□□ 1
RTEL1-TNFRSF6B-203ENST00000492259 NEUROD1Q13562 356 aa21.32■■□□□ 1
RTEL1-TNFRSF6B-203ENST00000492259 FAM50AQ14320 339 aaKnown RBP21.29■■□□□ 1
RTEL1-TNFRSF6B-203ENST00000492259 MYO15BQ96JP2 1530 aa21.28■■□□□ 1
RTEL1-TNFRSF6B-203ENST00000492259 NPM2Q86SE8 214 aaKnown RBP21.25■□□□□ 0.99
RTEL1-TNFRSF6B-203ENST00000492259 FKBP8Q14318 412 aa21.22■□□□□ 0.99
RTEL1-TNFRSF6B-203ENST00000492259 ANP32BQ92688 251 aaKnown RBP21.21■□□□□ 0.99
RTEL1-TNFRSF6B-203ENST00000492259 NBR1Q14596 966 aa21.16■□□□□ 0.98
RTEL1-TNFRSF6B-203ENST00000492259 RB1CC1Q8TDY2 1594 aa21.1■□□□□ 0.97
RTEL1-TNFRSF6B-203ENST00000492259 ANP32EQ9BTT0 268 aa21.09■□□□□ 0.97
RTEL1-TNFRSF6B-203ENST00000492259 ZBTB47Q9UFB7 747 aaPredicted RBP21.09■□□□□ 0.97
RTEL1-TNFRSF6B-203ENST00000492259 SLC4A1APQ9BWU0 796 aaKnown RBP21.07■□□□□ 0.96
RTEL1-TNFRSF6B-203ENST00000492259 TRIM52Q96A61 297 aa21.05■□□□□ 0.96
RTEL1-TNFRSF6B-203ENST00000492259 NACADO15069 1562 aa20.97■□□□□ 0.95
RTEL1-TNFRSF6B-203ENST00000492259 MIER1Q8N108 512 aa20.96■□□□□ 0.95
RTEL1-TNFRSF6B-203ENST00000492259 CANXP27824 592 aaKnown RBP20.95■□□□□ 0.95
RTEL1-TNFRSF6B-203ENST00000492259 BCL11AQ9H165 835 aa20.93■□□□□ 0.94
RTEL1-TNFRSF6B-203ENST00000492259 FBLN2P98095 1184 aa20.93■□□□□ 0.94
RTEL1-TNFRSF6B-203ENST00000492259 HSP90AA1P07900 732 aaKnown RBP20.87■□□□□ 0.93
RTEL1-TNFRSF6B-203ENST00000492259 UPF2Q9HAU5 1272 aaKnown RBP20.85■□□□□ 0.93
RTEL1-TNFRSF6B-203ENST00000492259 HNRNPUQ00839 825 aaKnown RBP eCLIP20.83■□□□□ 0.92
RTEL1-TNFRSF6B-203ENST00000492259 ARXQ96QS3 562 aa20.82■□□□□ 0.92
RTEL1-TNFRSF6B-203ENST00000492259 DDX10Q13206 875 aaKnown RBP20.82■□□□□ 0.92
RTEL1-TNFRSF6B-203ENST00000492259 CCDC136Q96JN2 1154 aa20.8■□□□□ 0.92
RTEL1-TNFRSF6B-203ENST00000492259 TNNT2P45379 298 aaPredicted RBP20.78■□□□□ 0.92
RTEL1-TNFRSF6B-203ENST00000492259 RSF1Q96T23 1441 aaPredicted RBP20.77■□□□□ 0.92
RTEL1-TNFRSF6B-203ENST00000492259 ZNF326Q5BKZ1 582 aaKnown RBP20.76■□□□□ 0.91
RTEL1-TNFRSF6B-203ENST00000492259 TONSLQ96HA7 1378 aa20.74■□□□□ 0.91
RTEL1-TNFRSF6B-203ENST00000492259 ERICH6BQ5W0A0 696 aa20.73■□□□□ 0.91
RTEL1-TNFRSF6B-203ENST00000492259 P3H3Q8IVL6 736 aa20.7■□□□□ 0.9
RTEL1-TNFRSF6B-203ENST00000492259 EEA1Q15075 1411 aa20.68■□□□□ 0.9
RTEL1-TNFRSF6B-203ENST00000492259 CEP162Q5TB80 1403 aa20.68■□□□□ 0.9
RTEL1-TNFRSF6B-203ENST00000492259 CLIP1P30622 1438 aa20.67■□□□□ 0.9
RTEL1-TNFRSF6B-203ENST00000492259 RTN4Q9NQC3 1192 aaKnown RBP20.66■□□□□ 0.9
RTEL1-TNFRSF6B-203ENST00000492259 NEFMP07197 916 aa20.66■□□□□ 0.9
RTEL1-TNFRSF6B-203ENST00000492259 TRIM44Q96DX7 344 aaPredicted RBP20.66■□□□□ 0.9
RTEL1-TNFRSF6B-203ENST00000492259 FAM9BQ8IZU0 186 aa20.6■□□□□ 0.89
RTEL1-TNFRSF6B-203ENST00000492259 TNIKQ9UKE5 1360 aa20.58■□□□□ 0.89
RTEL1-TNFRSF6B-203ENST00000492259 GOLGA3Q08378 1498 aa20.56■□□□□ 0.88
RTEL1-TNFRSF6B-203ENST00000492259 DDRGK1Q96HY6 314 aa20.55■□□□□ 0.88
RTEL1-TNFRSF6B-203ENST00000492259 NAP1L5Q96NT1 182 aaPredicted RBP20.55■□□□□ 0.88
RTEL1-TNFRSF6B-203ENST00000492259 IRX6P78412 446 aaPredicted RBP20.54■□□□□ 0.88
RTEL1-TNFRSF6B-203ENST00000492259 PPM1GO15355 546 aaPredicted RBP20.53■□□□□ 0.88
RTEL1-TNFRSF6B-203ENST00000492259 BAZ1BQ9UIG0 1483 aaKnown RBP20.52■□□□□ 0.88
RTEL1-TNFRSF6B-203ENST00000492259 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.5■□□□□ 0.87
RTEL1-TNFRSF6B-203ENST00000492259 BAZ1AQ9NRL2 1556 aaPredicted RBP20.48■□□□□ 0.87
RTEL1-TNFRSF6B-203ENST00000492259 ARID3CA6NKF2 412 aa20.48■□□□□ 0.87
RTEL1-TNFRSF6B-203ENST00000492259 CDK11BP21127 795 aaKnown RBP20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms