Protein–RNA interactions for Protein: P43243

MATR3, Matrin-3, humanhuman

Known RBP eCLIP

Length 847 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3P43243 SLC37A4-206ENST00000525372 1388 ntTSL 1 (best)19.27■□□□□ 0.682e-6■■■■□ 23.9
MATR3P43243 SLC37A4-211ENST00000529510 850 ntTSL 519.04■□□□□ 0.642e-6■■■■□ 23.9
MATR3P43243 RASA1-206ENST00000515800 4979 ntTSL 1 (best)18.91■□□□□ 0.622e-6■■■■□ 23.9
MATR3P43243 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.582e-6■■■■□ 23.9
MATR3P43243 SLC37A4-213ENST00000532085 5862 ntTSL 1 (best)18.53■□□□□ 0.562e-6■■■■□ 23.9
MATR3P43243 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC18.44■□□□□ 0.542e-6■■■■□ 23.9
MATR3P43243 PHLDB1-218ENST00000530994 5945 ntTSL 218.32■□□□□ 0.522e-6■■■■□ 23.9
MATR3P43243 SLC37A4-204ENST00000525039 1780 ntTSL 1 (best)18.22■□□□□ 0.512e-6■■■■□ 23.9
MATR3P43243 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.512e-6■■■■□ 23.9
MATR3P43243 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.492e-6■■■■□ 23.9
MATR3P43243 LENG8-206ENST00000443957 463 ntTSL 318.05■□□□□ 0.483e-6■■■■□ 23.9
MATR3P43243 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.482e-6■■■■□ 23.9
MATR3P43243 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.462e-6■■■■□ 23.9
MATR3P43243 NDRG1-210ENST00000518480 558 ntTSL 417.87■□□□□ 0.452e-6■■■■□ 23.9
MATR3P43243 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC17.86■□□□□ 0.452e-6■■■■□ 23.9
MATR3P43243 PDLIM5-212ENST00000509333 743 ntTSL 217.61■□□□□ 0.412e-6■■■■□ 23.9
MATR3P43243 PDLIM5-216ENST00000511767 463 ntTSL 517.61■□□□□ 0.412e-6■■■■□ 23.9
MATR3P43243 SLC37A4-212ENST00000530407 1472 ntTSL 217.59■□□□□ 0.412e-6■■■■□ 23.9
MATR3P43243 MTMR10-204ENST00000565728 1623 ntTSL 517.52■□□□□ 0.42e-6■■■■□ 23.9
MATR3P43243 PHLDB1-214ENST00000528594 5787 ntTSL 217.49■□□□□ 0.392e-6■■■■□ 23.9
MATR3P43243 CEP44-209ENST00000514712 605 ntTSL 417.42■□□□□ 0.382e-6■■■■□ 23.9
MATR3P43243 ARAP1-210ENST00000465814 5612 ntTSL 217.39■□□□□ 0.372e-6■■■■□ 23.9
MATR3P43243 SLC13A5-212ENST00000576323 574 ntTSL 417.35■□□□□ 0.372e-6■■■■□ 23.9
MATR3P43243 PHLDB1-220ENST00000532517 5242 ntTSL 1 (best)17.32■□□□□ 0.362e-6■■■■□ 23.9
MATR3P43243 PHLDB1-213ENST00000527898 2921 ntTSL 217.21■□□□□ 0.352e-6■■■■□ 23.9
MATR3P43243 NDRG1-225ENST00000522890 581 ntTSL 517.2■□□□□ 0.342e-6■■■■□ 23.9
MATR3P43243 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.343e-6■■■■□ 23.9
MATR3P43243 PHLDB1-222ENST00000534140 3128 ntTSL 217.11■□□□□ 0.332e-6■■■■□ 23.9
MATR3P43243 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.312e-6■■■■□ 23.9
MATR3P43243 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC16.91■□□□□ 0.32e-6■■■■□ 23.9
MATR3P43243 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC16.91■□□□□ 0.32e-6■■■■□ 23.9
MATR3P43243 SLC13A5-206ENST00000572352 538 ntTSL 416.77■□□□□ 0.282e-6■■■■□ 23.9
MATR3P43243 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC16.65■□□□□ 0.262e-6■■■■□ 23.9
MATR3P43243 SLC13A5-205ENST00000572094 986 ntTSL 516.6■□□□□ 0.252e-6■■■■□ 23.9
MATR3P43243 SLC13A5-211ENST00000575230 547 ntTSL 516.6■□□□□ 0.252e-6■■■■□ 23.9
MATR3P43243 NDRG1-211ENST00000519228 729 ntTSL 416.53■□□□□ 0.242e-6■■■■□ 23.9
MATR3P43243 PRKN-207ENST00000479615 904 ntTSL 516.44■□□□□ 0.222e-6■■■■□ 23.9
MATR3P43243 PHLDB1-215ENST00000528875 548 ntTSL 416.41■□□□□ 0.222e-6■■■■□ 23.9
MATR3P43243 ARAP1-216ENST00000542596 699 ntTSL 516.2■□□□□ 0.182e-6■■■■□ 23.9
MATR3P43243 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC16.17■□□□□ 0.182e-6■■■■□ 23.9
MATR3P43243 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC16.13■□□□□ 0.172e-6■■■■□ 23.9
MATR3P43243 PHLDB1-225ENST00000614369 3442 ntTSL 1 (best)15.99■□□□□ 0.152e-6■■■■□ 23.9
MATR3P43243 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.152e-6■■■■□ 23.9
MATR3P43243 ARAP1-202ENST00000359373 5767 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.142e-6■■■■□ 23.9
MATR3P43243 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.132e-6■■■■□ 23.9
MATR3P43243 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC15.81■□□□□ 0.122e-6■■■■□ 23.9
MATR3P43243 PHLDB1-201ENST00000356063 5240 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.112e-6■■■■□ 23.9
MATR3P43243 SLC37A4-219ENST00000638360 1912 ntTSL 515.64■□□□□ 0.092e-6■■■■□ 23.9
MATR3P43243 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.092e-6■■■■□ 23.9
MATR3P43243 ARAP1-204ENST00000393609 5145 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.072e-6■■■■□ 23.9
MATR3P43243 SLC37A4-205ENST00000525102 2844 ntTSL 215.41■□□□□ 0.062e-6■■■■□ 23.9
MATR3P43243 PRKN-205ENST00000366897 2877 ntTSL 1 (best) BASIC15.26■□□□□ 0.032e-6■■■■□ 23.9
MATR3P43243 PRKACB-205ENST00000370688 1905 ntTSL 1 (best) BASIC15.06■□□□□ 02e-6■■■■□ 23.9
MATR3P43243 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.013e-6■■■■□ 23.9
MATR3P43243 IMPAD1-202ENST00000517461 487 ntTSL 514.95□□□□□ -0.022e-6■■■■□ 23.9
MATR3P43243 SLC37A4-218ENST00000638186 2074 ntTSL 514.94□□□□□ -0.022e-6■■■■□ 23.9
MATR3P43243 ARFGEF1-201ENST00000262215 7225 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.042e-6■■■■□ 23.9
MATR3P43243 SLC37A4-202ENST00000357590 2356 ntTSL 5 BASIC14.82□□□□□ -0.042e-6■■■■□ 23.9
MATR3P43243 SLC37A4-220ENST00000638925 2046 ntTSL 514.76□□□□□ -0.052e-6■■■■□ 23.9
MATR3P43243 NDRG1-214ENST00000520230 582 ntTSL 414.71□□□□□ -0.052e-6■■■■□ 23.9
MATR3P43243 BRPF3-203ENST00000441123 5380 ntTSL 1 (best)14.66□□□□□ -0.062e-6■■■■□ 23.9
MATR3P43243 LENG8-205ENST00000439657 1073 ntTSL 514.63□□□□□ -0.073e-6■■■■□ 23.9
MATR3P43243 LENG8-201ENST00000326764 3991 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.073e-6■■■■□ 23.9
MATR3P43243 ARAP1-211ENST00000495878 2758 ntTSL 1 (best)14.53□□□□□ -0.082e-6■■■■□ 23.9
MATR3P43243 NDRG1-206ENST00000518010 581 ntTSL 414.52□□□□□ -0.092e-6■■■■□ 23.9
MATR3P43243 PHLDB1-224ENST00000612681 3337 ntTSL 514.34□□□□□ -0.112e-6■■■■□ 23.9
MATR3P43243 WASHC3-204ENST00000535501 921 ntTSL 214.34□□□□□ -0.112e-6■■■■□ 23.9
MATR3P43243 SLC37A4-210ENST00000527992 2040 ntTSL 1 (best)14.31□□□□□ -0.122e-6■■■■□ 23.9
MATR3P43243 BRPF3-201ENST00000339717 4820 ntTSL 5 BASIC14.27□□□□□ -0.132e-6■■■■□ 23.9
MATR3P43243 ARAP1-209ENST00000455638 2683 ntTSL 5 BASIC14.11□□□□□ -0.152e-6■■■■□ 23.9
MATR3P43243 NDRG1-213ENST00000519580 550 ntTSL 513.95□□□□□ -0.182e-6■■■■□ 23.9
MATR3P43243 NDRG1-219ENST00000521544 709 ntTSL 513.95□□□□□ -0.182e-6■■■■□ 23.9
MATR3P43243 ABCD1-201ENST00000218104 3664 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.193e-8■■■■□ 23.9
MATR3P43243 CEP44-205ENST00000503053 732 ntTSL 513.81□□□□□ -0.22e-6■■■■□ 23.9
MATR3P43243 CAPRIN2-205ENST00000454014 4398 ntTSL 1 (best)13.79□□□□□ -0.22e-12■■■■□ 23.9
MATR3P43243 PRKACB-206ENST00000370689 4513 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.222e-6■■■■□ 23.9
MATR3P43243 CPVL-201ENST00000265394 2091 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.232e-6■■■■□ 23.9
MATR3P43243 NDRG1-221ENST00000522377 1103 ntTSL 513.52□□□□□ -0.252e-6■■■■□ 23.9
MATR3P43243 PRKN-206ENST00000366898 4180 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.252e-6■■■■□ 23.9
MATR3P43243 ACACA-234ENST00000614482 2177 ntTSL 213.41□□□□□ -0.262e-7■■■■□ 23.9
MATR3P43243 CAPRIN2-201ENST00000298892 4334 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.272e-12■■■■□ 23.9
MATR3P43243 BRPF3-206ENST00000449261 4816 ntTSL 513.16□□□□□ -0.32e-6■■■■□ 23.9
MATR3P43243 SLC37A4-208ENST00000526275 2626 ntTSL 1 (best)13.13□□□□□ -0.312e-6■■■■□ 23.9
MATR3P43243 PDLIM5-220ENST00000514830 802 ntTSL 213.04□□□□□ -0.322e-6■■■■□ 23.9
MATR3P43243 WASHC3-212ENST00000544341 945 ntTSL 312.89□□□□□ -0.352e-6■■■■□ 23.9
MATR3P43243 CPVL-207ENST00000448959 874 ntTSL 212.84□□□□□ -0.352e-6■■■■□ 23.9
MATR3P43243 LMO7-204ENST00000377499 3472 ntTSL 212.76□□□□□ -0.372e-6■■■■□ 23.9
MATR3P43243 ARL15-204ENST00000505630 628 ntTSL 1 (best)12.72□□□□□ -0.372e-6■■■■□ 23.9
MATR3P43243 PHLDB1-203ENST00000392852 3191 ntTSL 212.63□□□□□ -0.392e-6■■■■□ 23.9
MATR3P43243 ARAP1-205ENST00000426523 4066 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.412e-6■■■■□ 23.9
MATR3P43243 NDRG1-224ENST00000522738 530 ntTSL 512.47□□□□□ -0.412e-6■■■■□ 23.9
MATR3P43243 CTDSPL-202ENST00000310189 1482 ntTSL 512.45□□□□□ -0.422e-6■■■■□ 23.9
MATR3P43243 PHLDB1-219ENST00000531987 991 ntTSL 212.42□□□□□ -0.422e-6■■■■□ 23.9
MATR3P43243 CPVL-204ENST00000432534 679 ntTSL 312.31□□□□□ -0.442e-6■■■■□ 23.9
MATR3P43243 CDC40-202ENST00000368930 1977 ntTSL 2 BASIC12.2□□□□□ -0.462e-6■■■■□ 23.9
MATR3P43243 MTMR10-207ENST00000567567 2833 ntTSL 212.19□□□□□ -0.462e-6■■■■□ 23.9
MATR3P43243 SLC37A4-203ENST00000524428 1526 ntTSL 1 (best)12.14□□□□□ -0.472e-6■■■■□ 23.9
MATR3P43243 MTMR10-202ENST00000563714 2216 ntTSL 2 BASIC11.99□□□□□ -0.492e-6■■■■□ 23.9
MATR3P43243 PDLIM5-210ENST00000508216 1794 ntTSL 2 BASIC11.98□□□□□ -0.492e-6■■■■□ 23.9
MATR3P43243 BRPF3-209ENST00000532330 4077 ntTSL 511.92□□□□□ -0.52e-6■■■■□ 23.9
Retrieved 100 of 16,209 protein–RNA pairs in 124.9 ms