RNA–Protein interactions for RNA: ENST00000515800.6

RASA1-206, Transcript of RAS p21 protein activator 1, humanhuman

TSL 1 (best)

Gene RASA1, Length 4,979 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RASA1-206ENST00000515800 NISCHQ9Y2I1 1504 aa30.91■■■□□ 2.54
RASA1-206ENST00000515800 DCAF8L2P0C7V8 631 aa29.33■■■□□ 2.29
RASA1-206ENST00000515800 SHROOM4Q9ULL8 1493 aa27.62■■■□□ 2.01
RASA1-206ENST00000515800 SUPT5HO00267 1087 aaKnown RBP27.59■■■□□ 2.01
RASA1-206ENST00000515800 PELP1Q8IZL8 1130 aaKnown RBP27.14■■□□□ 1.93
RASA1-206ENST00000515800 MYT1Q01538 1121 aa26.92■■□□□ 1.9
RASA1-206ENST00000515800 EHMT2Q96KQ7 1210 aa26.4■■□□□ 1.82
RASA1-206ENST00000515800 ABCC9O60706 1549 aa26.23■■□□□ 1.79
RASA1-206ENST00000515800 CCDC180Q9P1Z9 1646 aa26.16■■□□□ 1.78
RASA1-206ENST00000515800 FAM9AQ8IZU1 332 aaPredicted RBP25.95■■□□□ 1.74
RASA1-206ENST00000515800 TRIM41Q8WV44 630 aa25.93■■□□□ 1.74
RASA1-206ENST00000515800 APLP2Q06481 763 aa25.93■■□□□ 1.74
RASA1-206ENST00000515800 CENPBP07199 599 aaPredicted RBP25.77■■□□□ 1.72
RASA1-206ENST00000515800 PCGF6Q9BYE7 350 aa25.74■■□□□ 1.71
RASA1-206ENST00000515800 ZCCHC6Q5VYS8 1495 aaKnown RBP25.7■■□□□ 1.7
RASA1-206ENST00000515800 PABPN1Q86U42 306 aaKnown RBP eCLIP25.47■■□□□ 1.67
RASA1-206ENST00000515800 ZEB1P37275 1124 aaPredicted RBP25.47■■□□□ 1.67
RASA1-206ENST00000515800 TTBK1Q5TCY1 1321 aaPredicted RBP25.46■■□□□ 1.67
RASA1-206ENST00000515800 ERICH6Q7L0X2 663 aa25.37■■□□□ 1.65
RASA1-206ENST00000515800 UBTFP17480 764 aaKnown RBP25.36■■□□□ 1.65
RASA1-206ENST00000515800 HRCP23327 699 aa25.33■■□□□ 1.65
RASA1-206ENST00000515800 RANGAP1P46060 587 aaPredicted RBP25.31■■□□□ 1.64
RASA1-206ENST00000515800 RB1CC1Q8TDY2 1594 aa25.22■■□□□ 1.63
RASA1-206ENST00000515800 SCRIBQ14160 1630 aa25.18■■□□□ 1.62
RASA1-206ENST00000515800 NACADO15069 1562 aa25.14■■□□□ 1.61
RASA1-206ENST00000515800 CCER1Q8TC90 406 aaPredicted RBP25.13■■□□□ 1.61
RASA1-206ENST00000515800 CHIC1Q5VXU3 224 aa25.12■■□□□ 1.61
RASA1-206ENST00000515800 ATP1B4Q9UN42 357 aaPredicted RBP25.01■■□□□ 1.59
RASA1-206ENST00000515800 DCAF1Q9Y4B6 1507 aa25■■□□□ 1.59
RASA1-206ENST00000515800 YTHDC1Q96MU7 727 aaKnown RBP24.76■■□□□ 1.55
RASA1-206ENST00000515800 PPARGC1BQ86YN6 1023 aaKnown RBP24.63■■□□□ 1.53
RASA1-206ENST00000515800 NEFLP07196 543 aa24.59■■□□□ 1.53
RASA1-206ENST00000515800 TRIM26Q12899 539 aaPredicted RBP24.55■■□□□ 1.52
RASA1-206ENST00000515800 LOC105371045A0A1W2PR82 267 aa24.52■■□□□ 1.52
RASA1-206ENST00000515800 MYO15BQ96JP2 1530 aa24.52■■□□□ 1.52
RASA1-206ENST00000515800 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.45■■□□□ 1.5
RASA1-206ENST00000515800 HNRNPUL2Q1KMD3 747 aaKnown RBP24.45■■□□□ 1.5
RASA1-206ENST00000515800 RSF1Q96T23 1441 aaPredicted RBP24.35■■□□□ 1.49
RASA1-206ENST00000515800 BAZ1AQ9NRL2 1556 aaPredicted RBP24.31■■□□□ 1.48
RASA1-206ENST00000515800 CSRNP3Q8WYN3 585 aa24.28■■□□□ 1.48
RASA1-206ENST00000515800 GTF3C3Q9Y5Q9 886 aa24.26■■□□□ 1.47
RASA1-206ENST00000515800 BAZ1BQ9UIG0 1483 aaKnown RBP24.21■■□□□ 1.47
RASA1-206ENST00000515800 ITGAEP38570 1179 aa24.16■■□□□ 1.46
RASA1-206ENST00000515800 MYT1LQ9UL68 1186 aa24.09■■□□□ 1.45
RASA1-206ENST00000515800 FBLN2P98095 1184 aa24.06■■□□□ 1.44
RASA1-206ENST00000515800 DIEXFQ68CQ4 756 aaKnown RBP24.02■■□□□ 1.44
RASA1-206ENST00000515800 ACIN1Q9UKV3 1341 aaKnown RBP24.01■■□□□ 1.43
RASA1-206ENST00000515800 EEA1Q15075 1411 aa23.94■■□□□ 1.42
RASA1-206ENST00000515800 CECR2Q9BXF3 1484 aa23.94■■□□□ 1.42
RASA1-206ENST00000515800 RTL5Q5HYW3 569 aaPredicted RBP23.93■■□□□ 1.42
RASA1-206ENST00000515800 SMARCA2P51531 1590 aa23.9■■□□□ 1.42
RASA1-206ENST00000515800 FAM50AQ14320 339 aaKnown RBP23.86■■□□□ 1.41
RASA1-206ENST00000515800 WRNQ14191 1432 aaPredicted RBP eCLIP23.82■■□□□ 1.4
RASA1-206ENST00000515800 CDK11AQ9UQ88 783 aaPredicted RBP23.82■■□□□ 1.4
RASA1-206ENST00000515800 DAXXQ9UER7 740 aaPredicted RBP23.81■■□□□ 1.4
RASA1-206ENST00000515800 POLR3GLQ9BT43 218 aa23.78■■□□□ 1.4
RASA1-206ENST00000515800 MROH2BQ7Z745 1585 aa23.75■■□□□ 1.39
RASA1-206ENST00000515800 SCAF1Q9H7N4 1312 aaKnown RBP23.71■■□□□ 1.39
RASA1-206ENST00000515800 P3H3Q8IVL6 736 aa23.68■■□□□ 1.38
RASA1-206ENST00000515800 KIF27Q86VH2 1401 aa23.64■■□□□ 1.38
RASA1-206ENST00000515800 TRIM52Q96A61 297 aa23.6■■□□□ 1.37
RASA1-206ENST00000515800 GOLGA3Q08378 1498 aa23.6■■□□□ 1.37
RASA1-206ENST00000515800 TOP2AP11388 1531 aaKnown RBP23.6■■□□□ 1.37
RASA1-206ENST00000515800 CNGB1Q14028 1251 aaPredicted RBP23.59■■□□□ 1.37
RASA1-206ENST00000515800 CHMP7Q8WUX9 453 aaPredicted RBP23.59■■□□□ 1.37
RASA1-206ENST00000515800 ERCC6Q03468 1493 aa23.56■■□□□ 1.36
RASA1-206ENST00000515800 CCDC88BA6NC98 1476 aa23.54■■□□□ 1.36
RASA1-206ENST00000515800 SMARCA4P51532 1647 aa23.49■■□□□ 1.35
RASA1-206ENST00000515800 CEP164Q9UPV0 1460 aa23.49■■□□□ 1.35
RASA1-206ENST00000515800 CLIP1P30622 1438 aa23.49■■□□□ 1.35
RASA1-206ENST00000515800 NPM1P06748 294 aaKnown RBP eCLIP23.48■■□□□ 1.35
RASA1-206ENST00000515800 PDS5BQ9NTI5 1447 aa23.47■■□□□ 1.35
RASA1-206ENST00000515800 BCANQ96GW7 911 aa23.47■■□□□ 1.35
RASA1-206ENST00000515800 ATAD2BQ9ULI0 1458 aa23.44■■□□□ 1.34
RASA1-206ENST00000515800 NEUROD1Q13562 356 aa23.4■■□□□ 1.34
RASA1-206ENST00000515800 WIZO95785 1651 aa23.4■■□□□ 1.34
RASA1-206ENST00000515800 TNIKQ9UKE5 1360 aa23.38■■□□□ 1.33
RASA1-206ENST00000515800 ARID3CA6NKF2 412 aa23.37■■□□□ 1.33
RASA1-206ENST00000515800 EIF5BO60841 1220 aaKnown RBP23.35■■□□□ 1.33
RASA1-206ENST00000515800 CLSPNQ9HAW4 1339 aa23.34■■□□□ 1.33
RASA1-206ENST00000515800 SLC4A1APQ9BWU0 796 aaKnown RBP23.32■■□□□ 1.32
RASA1-206ENST00000515800 ZNF777Q9ULD5 760 aaPredicted RBP23.31■■□□□ 1.32
RASA1-206ENST00000515800 CADPSQ9ULU8 1353 aa23.31■■□□□ 1.32
RASA1-206ENST00000515800 CEP162Q5TB80 1403 aa23.3■■□□□ 1.32
RASA1-206ENST00000515800 MTUS2Q5JR59 1369 aa23.3■■□□□ 1.32
RASA1-206ENST00000515800 GLIPR1L2Q4G1C9 344 aa23.25■■□□□ 1.31
RASA1-206ENST00000515800 CUX2O14529 1486 aa23.25■■□□□ 1.31
RASA1-206ENST00000515800 ZNF316A6NFI3 1004 aaPredicted RBP23.25■■□□□ 1.31
RASA1-206ENST00000515800 BCL11AQ9H165 835 aa23.25■■□□□ 1.31
RASA1-206ENST00000515800 ANP32EQ9BTT0 268 aa23.21■■□□□ 1.31
RASA1-206ENST00000515800 CARMIL1Q5VZK9 1371 aa23.19■■□□□ 1.3
RASA1-206ENST00000515800 NCAPD3P42695 1498 aa23.11■■□□□ 1.29
RASA1-206ENST00000515800 SOGA1O94964 1423 aa23.11■■□□□ 1.29
RASA1-206ENST00000515800 ABCC8Q09428 1581 aa23.11■■□□□ 1.29
RASA1-206ENST00000515800 ZNF326Q5BKZ1 582 aaKnown RBP23.11■■□□□ 1.29
RASA1-206ENST00000515800 PLEKHD1A6NEE1 506 aa23.11■■□□□ 1.29
RASA1-206ENST00000515800 FHAD1B1AJZ9 1412 aa23.1■■□□□ 1.29
RASA1-206ENST00000515800 TSPY4P0CV99 314 aa23.1■■□□□ 1.29
RASA1-206ENST00000515800 TSPY10P0CW01 314 aa23.1■■□□□ 1.29
RASA1-206ENST00000515800 EIF4G1Q04637 1599 aaKnown RBP23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms