RNA–Protein interactions for RNA: ENST00000531987.2

PHLDB1-219, Transcript of pleckstrin homology like domain family B member 1, humanhuman

TSL 2

Gene PHLDB1, Length 991 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHLDB1-219ENST00000531987 NISCHQ9Y2I1 1504 aa27.62■■■□□ 2.01
PHLDB1-219ENST00000531987 ABCC9O60706 1549 aa24.56■■□□□ 1.52
PHLDB1-219ENST00000531987 CCDC180Q9P1Z9 1646 aa24.51■■□□□ 1.51
PHLDB1-219ENST00000531987 DCAF8L2P0C7V8 631 aa23.55■■□□□ 1.36
PHLDB1-219ENST00000531987 RB1CC1Q8TDY2 1594 aa23.34■■□□□ 1.33
PHLDB1-219ENST00000531987 NACADO15069 1562 aa23.22■■□□□ 1.31
PHLDB1-219ENST00000531987 PABPN1Q86U42 306 aaKnown RBP eCLIP23.03■■□□□ 1.28
PHLDB1-219ENST00000531987 ZCCHC6Q5VYS8 1495 aaKnown RBP22.91■■□□□ 1.26
PHLDB1-219ENST00000531987 MYO15BQ96JP2 1530 aa22.9■■□□□ 1.26
PHLDB1-219ENST00000531987 DNAJC5BQ9UF47 199 aa22.88■■□□□ 1.25
PHLDB1-219ENST00000531987 DCAF1Q9Y4B6 1507 aa22.72■■□□□ 1.23
PHLDB1-219ENST00000531987 UNC13AQ9UPW8 1703 aa22.67■■□□□ 1.22
PHLDB1-219ENST00000531987 BICRAQ9NZM4 1560 aa22.63■■□□□ 1.21
PHLDB1-219ENST00000531987 SCRIBQ14160 1630 aa22.55■■□□□ 1.2
PHLDB1-219ENST00000531987 SHROOM4Q9ULL8 1493 aa22.26■■□□□ 1.15
PHLDB1-219ENST00000531987 CC2D2AQ9P2K1 1620 aa22.08■■□□□ 1.13
PHLDB1-219ENST00000531987 EIF4G1Q04637 1599 aaKnown RBP22.08■■□□□ 1.12
PHLDB1-219ENST00000531987 CECR2Q9BXF3 1484 aa22.05■■□□□ 1.12
PHLDB1-219ENST00000531987 NCAPD3P42695 1498 aa21.48■■□□□ 1.03
PHLDB1-219ENST00000531987 ATAD2BQ9ULI0 1458 aa21.48■■□□□ 1.03
PHLDB1-219ENST00000531987 SMARCA4P51532 1647 aa21.45■■□□□ 1.02
PHLDB1-219ENST00000531987 BAZ1AQ9NRL2 1556 aaPredicted RBP21.4■■□□□ 1.02
PHLDB1-219ENST00000531987 SMARCA2P51531 1590 aa21.37■■□□□ 1.01
PHLDB1-219ENST00000531987 MROH2BQ7Z745 1585 aa21.32■■□□□ 1
PHLDB1-219ENST00000531987 BAZ1BQ9UIG0 1483 aaKnown RBP21.3■■□□□ 1
PHLDB1-219ENST00000531987 HMGXB3Q12766 1538 aa21.27■■□□□ 1
PHLDB1-219ENST00000531987 ERCC6Q03468 1493 aa21.19■□□□□ 0.98
PHLDB1-219ENST00000531987 PEG3Q9GZU2 1588 aa21.16■□□□□ 0.98
PHLDB1-219ENST00000531987 NESP48681 1621 aa21.15■□□□□ 0.98
PHLDB1-219ENST00000531987 WIZO95785 1651 aa21.05■□□□□ 0.96
PHLDB1-219ENST00000531987 RSF1Q96T23 1441 aaPredicted RBP21■□□□□ 0.95
PHLDB1-219ENST00000531987 CUX2O14529 1486 aa20.94■□□□□ 0.94
PHLDB1-219ENST00000531987 LAMC3Q9Y6N6 1575 aa20.9■□□□□ 0.94
PHLDB1-219ENST00000531987 CADPSQ9ULU8 1353 aa20.9■□□□□ 0.94
PHLDB1-219ENST00000531987 PDS5BQ9NTI5 1447 aa20.88■□□□□ 0.93
PHLDB1-219ENST00000531987 DNAJC5Q9H3Z4 198 aa20.78■□□□□ 0.92
PHLDB1-219ENST00000531987 TOP2AP11388 1531 aaKnown RBP20.78■□□□□ 0.92
PHLDB1-219ENST00000531987 KIF21AQ7Z4S6 1674 aa20.73■□□□□ 0.91
PHLDB1-219ENST00000531987 THOC2Q8NI27 1593 aaKnown RBP20.72■□□□□ 0.91
PHLDB1-219ENST00000531987 FANCD2Q9BXW9 1451 aa20.66■□□□□ 0.9
PHLDB1-219ENST00000531987 MRC2Q9UBG0 1479 aa20.66■□□□□ 0.9
PHLDB1-219ENST00000531987 CFTRP13569 1480 aa20.65■□□□□ 0.9
PHLDB1-219ENST00000531987 CEP164Q9UPV0 1460 aa20.64■□□□□ 0.89
PHLDB1-219ENST00000531987 CCDC88BA6NC98 1476 aa20.62■□□□□ 0.89
PHLDB1-219ENST00000531987 WDR62O43379 1518 aa20.53■□□□□ 0.88
PHLDB1-219ENST00000531987 SUPT5HO00267 1087 aaKnown RBP20.48■□□□□ 0.87
PHLDB1-219ENST00000531987 URB2Q14146 1524 aaKnown RBP20.45■□□□□ 0.86
PHLDB1-219ENST00000531987 TOPBP1Q92547 1522 aa20.27■□□□□ 0.83
PHLDB1-219ENST00000531987 PRDM2Q13029 1718 aa20.25■□□□□ 0.83
PHLDB1-219ENST00000531987 IFT140Q96RY7 1462 aa20.21■□□□□ 0.83
PHLDB1-219ENST00000531987 ABCC8Q09428 1581 aa20.2■□□□□ 0.82
PHLDB1-219ENST00000531987 ZNF608Q9ULD9 1512 aaPredicted RBP20.19■□□□□ 0.82
PHLDB1-219ENST00000531987 OSCARQ8IYS5 282 aa20.19■□□□□ 0.82
PHLDB1-219ENST00000531987 DNMBPQ6XZF7 1577 aa20.16■□□□□ 0.82
PHLDB1-219ENST00000531987 TRIM41Q8WV44 630 aa20.13■□□□□ 0.81
PHLDB1-219ENST00000531987 AQRO60306 1485 aaKnown RBP eCLIP20.09■□□□□ 0.81
PHLDB1-219ENST00000531987 POLA1P09884 1462 aaPredicted RBP20.07■□□□□ 0.8
PHLDB1-219ENST00000531987 RAD54L2Q9Y4B4 1467 aa20.07■□□□□ 0.8
PHLDB1-219ENST00000531987 SOGA1O94964 1423 aa20.07■□□□□ 0.8
PHLDB1-219ENST00000531987 FBLN2P98095 1184 aa20.05■□□□□ 0.8
PHLDB1-219ENST00000531987 TDRD9Q8NDG6 1382 aaKnown RBP20.04■□□□□ 0.8
PHLDB1-219ENST00000531987 FGD5Q6ZNL6 1462 aa20.01■□□□□ 0.79
PHLDB1-219ENST00000531987 CUX1P39880 1505 aa20.01■□□□□ 0.79
PHLDB1-219ENST00000531987 EIF4G3O43432 1585 aaKnown RBP20■□□□□ 0.79
PHLDB1-219ENST00000531987 TARBP1Q13395 1621 aaKnown RBP19.98■□□□□ 0.79
PHLDB1-219ENST00000531987 CHMP7Q8WUX9 453 aaPredicted RBP19.87■□□□□ 0.77
PHLDB1-219ENST00000531987 SNAPC4Q5SXM2 1469 aa19.85■□□□□ 0.77
PHLDB1-219ENST00000531987 WRNQ14191 1432 aaPredicted RBP eCLIP19.82■□□□□ 0.76
PHLDB1-219ENST00000531987 GRIN2BQ13224 1484 aa19.8■□□□□ 0.76
PHLDB1-219ENST00000531987 GAPVD1Q14C86 1478 aa19.78■□□□□ 0.76
PHLDB1-219ENST00000531987 CYB5RLQ6IPT4 315 aa19.77■□□□□ 0.76
PHLDB1-219ENST00000531987 CHD1O14646 1710 aa19.76■□□□□ 0.75
PHLDB1-219ENST00000531987 RIMBP3CA6NJZ7 1639 aa19.75■□□□□ 0.75
PHLDB1-219ENST00000531987 RIMBP3BA6NNM3 1639 aa19.75■□□□□ 0.75
PHLDB1-219ENST00000531987 RIMBP3Q9UFD9 1639 aa19.75■□□□□ 0.75
PHLDB1-219ENST00000531987 ARHGEF11O15085 1522 aa19.74■□□□□ 0.75
PHLDB1-219ENST00000531987 ABCA10Q8WWZ4 1543 aa19.74■□□□□ 0.75
PHLDB1-219ENST00000531987 MAGI1Q96QZ7 1491 aaPredicted RBP19.73■□□□□ 0.75
PHLDB1-219ENST00000531987 SYNJ1O43426 1573 aa19.72■□□□□ 0.75
PHLDB1-219ENST00000531987 WDR97A6NE52 1622 aa19.72■□□□□ 0.75
PHLDB1-219ENST00000531987 TOP2BQ02880 1626 aa19.69■□□□□ 0.74
PHLDB1-219ENST00000531987 SYNJ2O15056 1496 aa19.68■□□□□ 0.74
PHLDB1-219ENST00000531987 BIVM-ERCC5R4GMW8 1640 aa19.64■□□□□ 0.73
PHLDB1-219ENST00000531987 ABCA5Q8WWZ7 1642 aa19.62■□□□□ 0.73
PHLDB1-219ENST00000531987 PBRM1Q86U86 1689 aa19.62■□□□□ 0.73
PHLDB1-219ENST00000531987 ARAP1Q96P48 1450 aa19.58■□□□□ 0.72
PHLDB1-219ENST00000531987 CLASP1Q7Z460 1538 aa19.57■□□□□ 0.72
PHLDB1-219ENST00000531987 FHAD1B1AJZ9 1412 aa19.54■□□□□ 0.72
PHLDB1-219ENST00000531987 GRIN2AQ12879 1464 aa19.54■□□□□ 0.72
PHLDB1-219ENST00000531987 TRHP20396 242 aaPredicted RBP19.52■□□□□ 0.72
PHLDB1-219ENST00000531987 ADAMTS12P58397 1594 aa19.49■□□□□ 0.71
PHLDB1-219ENST00000531987 ERICH3Q5RHP9 1530 aa19.47■□□□□ 0.71
PHLDB1-219ENST00000531987 NUP160Q12769 1436 aa19.43■□□□□ 0.7
PHLDB1-219ENST00000531987 CEP170Q5SW79 1584 aa19.43■□□□□ 0.7
PHLDB1-219ENST00000531987 KIF27Q86VH2 1401 aa19.42■□□□□ 0.7
PHLDB1-219ENST00000531987 IGF1RP08069 1367 aa19.41■□□□□ 0.7
PHLDB1-219ENST00000531987 JPH4Q96JJ6 628 aa19.39■□□□□ 0.69
PHLDB1-219ENST00000531987 ERCC6L2Q5T890 1561 aa19.37■□□□□ 0.69
PHLDB1-219ENST00000531987 PRG4Q92954 1404 aaPredicted RBP19.33■□□□□ 0.68
PHLDB1-219ENST00000531987 CARMIL1Q5VZK9 1371 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms