RNA–Protein interactions for RNA: ENST00000366892.5

PRKN-202, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene PRKN, Length 1,505 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-202ENST00000366892 NISCHQ9Y2I1 1504 aa41.53■■■■■ 4.24
PRKN-202ENST00000366892 CCDC180Q9P1Z9 1646 aa36.97■■■■□ 3.51
PRKN-202ENST00000366892 ABCC9O60706 1549 aa36.66■■■■□ 3.46
PRKN-202ENST00000366892 RB1CC1Q8TDY2 1594 aa35.03■■■■□ 3.2
PRKN-202ENST00000366892 DCAF8L2P0C7V8 631 aa34.98■■■■□ 3.19
PRKN-202ENST00000366892 NACADO15069 1562 aa34.92■■■■□ 3.18
PRKN-202ENST00000366892 MYO15BQ96JP2 1530 aa34.59■■■■□ 3.13
PRKN-202ENST00000366892 ZCCHC6Q5VYS8 1495 aaKnown RBP34.49■■■■□ 3.11
PRKN-202ENST00000366892 DCAF1Q9Y4B6 1507 aa34.31■■■■□ 3.08
PRKN-202ENST00000366892 PABPN1Q86U42 306 aaKnown RBP eCLIP34.27■■■■□ 3.08
PRKN-202ENST00000366892 UNC13AQ9UPW8 1703 aa34.17■■■■□ 3.06
PRKN-202ENST00000366892 DNAJC5BQ9UF47 199 aa34.09■■■■□ 3.05
PRKN-202ENST00000366892 BICRAQ9NZM4 1560 aa34.02■■■■□ 3.04
PRKN-202ENST00000366892 SCRIBQ14160 1630 aa33.76■■■■□ 3
PRKN-202ENST00000366892 SHROOM4Q9ULL8 1493 aa33.58■■■□□ 2.97
PRKN-202ENST00000366892 EIF4G1Q04637 1599 aaKnown RBP33.14■■■□□ 2.9
PRKN-202ENST00000366892 CC2D2AQ9P2K1 1620 aa33.09■■■□□ 2.89
PRKN-202ENST00000366892 CECR2Q9BXF3 1484 aa32.98■■■□□ 2.87
PRKN-202ENST00000366892 NCAPD3P42695 1498 aa32.28■■■□□ 2.76
PRKN-202ENST00000366892 SMARCA4P51532 1647 aa32.26■■■□□ 2.75
PRKN-202ENST00000366892 ATAD2BQ9ULI0 1458 aa32.24■■■□□ 2.75
PRKN-202ENST00000366892 BAZ1AQ9NRL2 1556 aaPredicted RBP32.18■■■□□ 2.74
PRKN-202ENST00000366892 SMARCA2P51531 1590 aa32.13■■■□□ 2.73
PRKN-202ENST00000366892 HMGXB3Q12766 1538 aa32.01■■■□□ 2.72
PRKN-202ENST00000366892 MROH2BQ7Z745 1585 aa32.01■■■□□ 2.72
PRKN-202ENST00000366892 PEG3Q9GZU2 1588 aa31.95■■■□□ 2.71
PRKN-202ENST00000366892 BAZ1BQ9UIG0 1483 aaKnown RBP31.93■■■□□ 2.7
PRKN-202ENST00000366892 NESP48681 1621 aa31.62■■■□□ 2.65
PRKN-202ENST00000366892 WIZO95785 1651 aa31.61■■■□□ 2.65
PRKN-202ENST00000366892 ERCC6Q03468 1493 aa31.6■■■□□ 2.65
PRKN-202ENST00000366892 RSF1Q96T23 1441 aaPredicted RBP31.55■■■□□ 2.64
PRKN-202ENST00000366892 LAMC3Q9Y6N6 1575 aa31.42■■■□□ 2.62
PRKN-202ENST00000366892 CUX2O14529 1486 aa31.38■■■□□ 2.61
PRKN-202ENST00000366892 CADPSQ9ULU8 1353 aa31.34■■■□□ 2.61
PRKN-202ENST00000366892 PDS5BQ9NTI5 1447 aa31.28■■■□□ 2.6
PRKN-202ENST00000366892 TOP2AP11388 1531 aaKnown RBP31.24■■■□□ 2.59
PRKN-202ENST00000366892 KIF21AQ7Z4S6 1674 aa31.14■■■□□ 2.58
PRKN-202ENST00000366892 THOC2Q8NI27 1593 aaKnown RBP31.13■■■□□ 2.57
PRKN-202ENST00000366892 CFTRP13569 1480 aa31.05■■■□□ 2.56
PRKN-202ENST00000366892 DNAJC5Q9H3Z4 198 aa30.96■■■□□ 2.55
PRKN-202ENST00000366892 MRC2Q9UBG0 1479 aa30.95■■■□□ 2.55
PRKN-202ENST00000366892 CCDC88BA6NC98 1476 aa30.95■■■□□ 2.54
PRKN-202ENST00000366892 FANCD2Q9BXW9 1451 aa30.95■■■□□ 2.54
PRKN-202ENST00000366892 CEP164Q9UPV0 1460 aa30.92■■■□□ 2.54
PRKN-202ENST00000366892 WDR62O43379 1518 aa30.85■■■□□ 2.53
PRKN-202ENST00000366892 URB2Q14146 1524 aaKnown RBP30.65■■■□□ 2.5
PRKN-202ENST00000366892 PRDM2Q13029 1718 aa30.61■■■□□ 2.49
PRKN-202ENST00000366892 SUPT5HO00267 1087 aaKnown RBP30.53■■■□□ 2.48
PRKN-202ENST00000366892 TOPBP1Q92547 1522 aa30.4■■■□□ 2.46
PRKN-202ENST00000366892 ABCC8Q09428 1581 aa30.37■■■□□ 2.45
PRKN-202ENST00000366892 IFT140Q96RY7 1462 aa30.3■■■□□ 2.44
PRKN-202ENST00000366892 DNMBPQ6XZF7 1577 aa30.29■■■□□ 2.44
PRKN-202ENST00000366892 ZNF608Q9ULD9 1512 aaPredicted RBP30.23■■■□□ 2.43
PRKN-202ENST00000366892 POLA1P09884 1462 aaPredicted RBP30.13■■■□□ 2.41
PRKN-202ENST00000366892 OSCARQ8IYS5 282 aa30.12■■■□□ 2.41
PRKN-202ENST00000366892 TARBP1Q13395 1621 aaKnown RBP30.07■■■□□ 2.4
PRKN-202ENST00000366892 CUX1P39880 1505 aa30.04■■■□□ 2.4
PRKN-202ENST00000366892 AQRO60306 1485 aaKnown RBP eCLIP30.04■■■□□ 2.4
PRKN-202ENST00000366892 RAD54L2Q9Y4B4 1467 aa30.04■■■□□ 2.4
PRKN-202ENST00000366892 SOGA1O94964 1423 aa30.03■■■□□ 2.4
PRKN-202ENST00000366892 EIF4G3O43432 1585 aaKnown RBP30■■■□□ 2.39
PRKN-202ENST00000366892 FGD5Q6ZNL6 1462 aa29.99■■■□□ 2.39
PRKN-202ENST00000366892 TDRD9Q8NDG6 1382 aaKnown RBP29.93■■■□□ 2.38
PRKN-202ENST00000366892 FBLN2P98095 1184 aa29.78■■■□□ 2.36
PRKN-202ENST00000366892 TRIM41Q8WV44 630 aa29.77■■■□□ 2.36
PRKN-202ENST00000366892 WDR97A6NE52 1622 aa29.76■■■□□ 2.35
PRKN-202ENST00000366892 WRNQ14191 1432 aaPredicted RBP eCLIP29.74■■■□□ 2.35
PRKN-202ENST00000366892 GRIN2BQ13224 1484 aa29.69■■■□□ 2.34
PRKN-202ENST00000366892 SNAPC4Q5SXM2 1469 aa29.69■■■□□ 2.34
PRKN-202ENST00000366892 ABCA10Q8WWZ4 1543 aa29.69■■■□□ 2.34
PRKN-202ENST00000366892 CHD1O14646 1710 aa29.67■■■□□ 2.34
PRKN-202ENST00000366892 GAPVD1Q14C86 1478 aa29.65■■■□□ 2.34
PRKN-202ENST00000366892 TOP2BQ02880 1626 aa29.65■■■□□ 2.34
PRKN-202ENST00000366892 CHMP7Q8WUX9 453 aaPredicted RBP29.64■■■□□ 2.34
PRKN-202ENST00000366892 SYNJ1O43426 1573 aa29.64■■■□□ 2.34
PRKN-202ENST00000366892 MAGI1Q96QZ7 1491 aaPredicted RBP29.62■■■□□ 2.33
PRKN-202ENST00000366892 BIVM-ERCC5R4GMW8 1640 aa29.62■■■□□ 2.33
PRKN-202ENST00000366892 RIMBP3CA6NJZ7 1639 aa29.55■■■□□ 2.32
PRKN-202ENST00000366892 RIMBP3BA6NNM3 1639 aa29.55■■■□□ 2.32
PRKN-202ENST00000366892 RIMBP3Q9UFD9 1639 aa29.55■■■□□ 2.32
PRKN-202ENST00000366892 ARHGEF11O15085 1522 aa29.55■■■□□ 2.32
PRKN-202ENST00000366892 ABCA5Q8WWZ7 1642 aa29.55■■■□□ 2.32
PRKN-202ENST00000366892 SYNJ2O15056 1496 aa29.54■■■□□ 2.32
PRKN-202ENST00000366892 PBRM1Q86U86 1689 aa29.5■■■□□ 2.31
PRKN-202ENST00000366892 CYB5RLQ6IPT4 315 aa29.4■■■□□ 2.3
PRKN-202ENST00000366892 CLASP1Q7Z460 1538 aa29.39■■■□□ 2.3
PRKN-202ENST00000366892 ERICH3Q5RHP9 1530 aa29.3■■■□□ 2.28
PRKN-202ENST00000366892 GRIN2AQ12879 1464 aa29.3■■■□□ 2.28
PRKN-202ENST00000366892 FHAD1B1AJZ9 1412 aa29.29■■■□□ 2.28
PRKN-202ENST00000366892 ARAP1Q96P48 1450 aa29.29■■■□□ 2.28
PRKN-202ENST00000366892 ADAMTS12P58397 1594 aa29.29■■■□□ 2.28
PRKN-202ENST00000366892 NUP160Q12769 1436 aa29.2■■■□□ 2.26
PRKN-202ENST00000366892 CEP170Q5SW79 1584 aa29.15■■■□□ 2.26
PRKN-202ENST00000366892 KIF27Q86VH2 1401 aa29.14■■■□□ 2.26
PRKN-202ENST00000366892 IGF1RP08069 1367 aa29.13■■■□□ 2.25
PRKN-202ENST00000366892 ERCC6L2Q5T890 1561 aa28.99■■■□□ 2.23
PRKN-202ENST00000366892 JPH4Q96JJ6 628 aa28.98■■■□□ 2.23
PRKN-202ENST00000366892 SHROOM2Q13796 1616 aa28.96■■■□□ 2.23
PRKN-202ENST00000366892 CARMIL1Q5VZK9 1371 aa28.92■■■□□ 2.22
PRKN-202ENST00000366892 CUL7Q14999 1698 aa28.91■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms