RNA–Protein interactions for RNA: ENST00000449261.6

BRPF3-206, Transcript of bromodomain and PHD finger containing 3, humanhuman

TSL 5

Gene BRPF3, Length 4,816 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3-206ENST00000449261 DCAF8L2P0C7V8 631 aa20.28■□□□□ 0.84
BRPF3-206ENST00000449261 NISCHQ9Y2I1 1504 aa19.84■□□□□ 0.77
BRPF3-206ENST00000449261 MYT1Q01538 1121 aa19.39■□□□□ 0.69
BRPF3-206ENST00000449261 PELP1Q8IZL8 1130 aaKnown RBP19.25■□□□□ 0.67
BRPF3-206ENST00000449261 SUPT5HO00267 1087 aaKnown RBP19.13■□□□□ 0.65
BRPF3-206ENST00000449261 SHROOM4Q9ULL8 1493 aa18.92■□□□□ 0.62
BRPF3-206ENST00000449261 EHMT2Q96KQ7 1210 aa18.37■□□□□ 0.53
BRPF3-206ENST00000449261 TTBK1Q5TCY1 1321 aaPredicted RBP18.28■□□□□ 0.52
BRPF3-206ENST00000449261 FAM9AQ8IZU1 332 aaPredicted RBP18.02■□□□□ 0.47
BRPF3-206ENST00000449261 APLP2Q06481 763 aa17.97■□□□□ 0.47
BRPF3-206ENST00000449261 ERICH6Q7L0X2 663 aa17.92■□□□□ 0.46
BRPF3-206ENST00000449261 TRIM41Q8WV44 630 aa17.74■□□□□ 0.43
BRPF3-206ENST00000449261 RANGAP1P46060 587 aaPredicted RBP17.65■□□□□ 0.42
BRPF3-206ENST00000449261 PCGF6Q9BYE7 350 aa17.56■□□□□ 0.4
BRPF3-206ENST00000449261 UBTFP17480 764 aaKnown RBP17.5■□□□□ 0.39
BRPF3-206ENST00000449261 ATP1B4Q9UN42 357 aaPredicted RBP17.47■□□□□ 0.39
BRPF3-206ENST00000449261 SLC24A1O60721 1099 aa17.36■□□□□ 0.37
BRPF3-206ENST00000449261 CCER1Q8TC90 406 aaPredicted RBP17.26■□□□□ 0.35
BRPF3-206ENST00000449261 ABCC9O60706 1549 aa17.18■□□□□ 0.34
BRPF3-206ENST00000449261 ZEB1P37275 1124 aaPredicted RBP17.17■□□□□ 0.34
BRPF3-206ENST00000449261 PPARGC1BQ86YN6 1023 aaKnown RBP17.12■□□□□ 0.33
BRPF3-206ENST00000449261 CHIC1Q5VXU3 224 aa17.06■□□□□ 0.32
BRPF3-206ENST00000449261 PABPN1Q86U42 306 aaKnown RBP eCLIP17.05■□□□□ 0.32
BRPF3-206ENST00000449261 CENPBP07199 599 aaPredicted RBP17■□□□□ 0.31
BRPF3-206ENST00000449261 LOC105371045A0A1W2PR82 267 aa16.98■□□□□ 0.31
BRPF3-206ENST00000449261 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.93■□□□□ 0.3
BRPF3-206ENST00000449261 HNRNPUL2Q1KMD3 747 aaKnown RBP16.93■□□□□ 0.3
BRPF3-206ENST00000449261 TRIM26Q12899 539 aaPredicted RBP16.9■□□□□ 0.3
BRPF3-206ENST00000449261 ITGAEP38570 1179 aa16.87■□□□□ 0.29
BRPF3-206ENST00000449261 MYT1LQ9UL68 1186 aa16.79■□□□□ 0.28
BRPF3-206ENST00000449261 PRKCSHP14314 528 aaPredicted RBP16.68■□□□□ 0.26
BRPF3-206ENST00000449261 YTHDC1Q96MU7 727 aaKnown RBP16.67■□□□□ 0.26
BRPF3-206ENST00000449261 NEFLP07196 543 aa16.6■□□□□ 0.25
BRPF3-206ENST00000449261 BCL11AQ9H165 835 aa16.6■□□□□ 0.25
BRPF3-206ENST00000449261 HRCP23327 699 aa16.56■□□□□ 0.24
BRPF3-206ENST00000449261 POLR3GLQ9BT43 218 aa16.56■□□□□ 0.24
BRPF3-206ENST00000449261 EIF5BO60841 1220 aaKnown RBP16.48■□□□□ 0.23
BRPF3-206ENST00000449261 FAM50AQ14320 339 aaKnown RBP16.48■□□□□ 0.23
BRPF3-206ENST00000449261 FBLN2P98095 1184 aa16.45■□□□□ 0.22
BRPF3-206ENST00000449261 SCRIBQ14160 1630 aa16.41■□□□□ 0.22
BRPF3-206ENST00000449261 ZCCHC6Q5VYS8 1495 aaKnown RBP16.4■□□□□ 0.22
BRPF3-206ENST00000449261 CNGB1Q14028 1251 aaPredicted RBP16.38■□□□□ 0.21
BRPF3-206ENST00000449261 DAXXQ9UER7 740 aaPredicted RBP16.38■□□□□ 0.21
BRPF3-206ENST00000449261 CSRNP3Q8WYN3 585 aa16.36■□□□□ 0.21
BRPF3-206ENST00000449261 TRIM52Q96A61 297 aa16.35■□□□□ 0.21
BRPF3-206ENST00000449261 P3H3Q8IVL6 736 aa16.28■□□□□ 0.2
BRPF3-206ENST00000449261 SLC4A1APQ9BWU0 796 aaKnown RBP16.25■□□□□ 0.19
BRPF3-206ENST00000449261 NEUROD1Q13562 356 aa16.24■□□□□ 0.19
BRPF3-206ENST00000449261 CCDC180Q9P1Z9 1646 aa16.23■□□□□ 0.19
BRPF3-206ENST00000449261 ARID3CA6NKF2 412 aa16.21■□□□□ 0.19
BRPF3-206ENST00000449261 DIEXFQ68CQ4 756 aaKnown RBP16.17■□□□□ 0.18
BRPF3-206ENST00000449261 ZNF326Q5BKZ1 582 aaKnown RBP16.12■□□□□ 0.17
BRPF3-206ENST00000449261 GLIPR1L2Q4G1C9 344 aa16.09■□□□□ 0.17
BRPF3-206ENST00000449261 CDK11AQ9UQ88 783 aaPredicted RBP16.07■□□□□ 0.16
BRPF3-206ENST00000449261 ZNF777Q9ULD5 760 aaPredicted RBP16.06■□□□□ 0.16
BRPF3-206ENST00000449261 RB1CC1Q8TDY2 1594 aa16.02■□□□□ 0.15
BRPF3-206ENST00000449261 SCAF1Q9H7N4 1312 aaKnown RBP16.01■□□□□ 0.15
BRPF3-206ENST00000449261 GTF3C3Q9Y5Q9 886 aa15.96■□□□□ 0.15
BRPF3-206ENST00000449261 ANP32CO43423 234 aa15.93■□□□□ 0.14
BRPF3-206ENST00000449261 ANP32EQ9BTT0 268 aa15.91■□□□□ 0.14
BRPF3-206ENST00000449261 ZNF316A6NFI3 1004 aaPredicted RBP15.89■□□□□ 0.14
BRPF3-206ENST00000449261 RSF1Q96T23 1441 aaPredicted RBP15.89■□□□□ 0.13
BRPF3-206ENST00000449261 NPM1P06748 294 aaKnown RBP eCLIP15.88■□□□□ 0.13
BRPF3-206ENST00000449261 NACADO15069 1562 aa15.88■□□□□ 0.13
BRPF3-206ENST00000449261 ACIN1Q9UKV3 1341 aaKnown RBP15.87■□□□□ 0.13
BRPF3-206ENST00000449261 BCANQ96GW7 911 aa15.86■□□□□ 0.13
BRPF3-206ENST00000449261 CLSPNQ9HAW4 1339 aa15.84■□□□□ 0.13
BRPF3-206ENST00000449261 CHMP7Q8WUX9 453 aaPredicted RBP15.84■□□□□ 0.13
BRPF3-206ENST00000449261 ESF1Q9H501 851 aaKnown RBP15.79■□□□□ 0.12
BRPF3-206ENST00000449261 CHIC2Q9UKJ5 165 aa15.77■□□□□ 0.11
BRPF3-206ENST00000449261 PODXL2Q9NZ53 605 aa15.77■□□□□ 0.11
BRPF3-206ENST00000449261 DCAF1Q9Y4B6 1507 aa15.75■□□□□ 0.11
BRPF3-206ENST00000449261 BAZ1BQ9UIG0 1483 aaKnown RBP15.75■□□□□ 0.11
BRPF3-206ENST00000449261 CHGAP10645 457 aaKnown RBP15.75■□□□□ 0.11
BRPF3-206ENST00000449261 TONSLQ96HA7 1378 aa15.75■□□□□ 0.11
BRPF3-206ENST00000449261 MTUS2Q5JR59 1369 aa15.74■□□□□ 0.11
BRPF3-206ENST00000449261 CLIP1P30622 1438 aa15.73■□□□□ 0.11
BRPF3-206ENST00000449261 TSPY4P0CV99 314 aa15.71■□□□□ 0.11
BRPF3-206ENST00000449261 TSPY10P0CW01 314 aa15.71■□□□□ 0.11
BRPF3-206ENST00000449261 WRNQ14191 1432 aaPredicted RBP eCLIP15.7■□□□□ 0.1
BRPF3-206ENST00000449261 STAG3Q9UJ98 1225 aa15.7■□□□□ 0.1
BRPF3-206ENST00000449261 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.68■□□□□ 0.17e-7■□□□□ 9.8
BRPF3-206ENST00000449261 NEFMP07197 916 aa15.68■□□□□ 0.1
BRPF3-206ENST00000449261 EEA1Q15075 1411 aa15.68■□□□□ 0.1
BRPF3-206ENST00000449261 PLPPR3Q6T4P5 718 aa15.64■□□□□ 0.09
BRPF3-206ENST00000449261 RTL5Q5HYW3 569 aaPredicted RBP15.64■□□□□ 0.09
BRPF3-206ENST00000449261 CECR2Q9BXF3 1484 aa15.62■□□□□ 0.09
BRPF3-206ENST00000449261 GOLGA3Q08378 1498 aa15.61■□□□□ 0.09
BRPF3-206ENST00000449261 BAZ1AQ9NRL2 1556 aaPredicted RBP15.61■□□□□ 0.09
BRPF3-206ENST00000449261 ZBTB47Q9UFB7 747 aaPredicted RBP15.61■□□□□ 0.09
BRPF3-206ENST00000449261 CANXP27824 592 aaKnown RBP15.6■□□□□ 0.09
BRPF3-206ENST00000449261 KIF27Q86VH2 1401 aa15.6■□□□□ 0.09
BRPF3-206ENST00000449261 KCNH8Q96L42 1107 aa15.58■□□□□ 0.08
BRPF3-206ENST00000449261 PLEKHD1A6NEE1 506 aa15.58■□□□□ 0.08
BRPF3-206ENST00000449261 CEP162Q5TB80 1403 aa15.57■□□□□ 0.08
BRPF3-206ENST00000449261 DDX10Q13206 875 aaKnown RBP15.57■□□□□ 0.08
BRPF3-206ENST00000449261 RRP7BPQ9NSQ0 103 aa15.55■□□□□ 0.08
BRPF3-206ENST00000449261 KDM2AQ9Y2K7 1162 aa15.54■□□□□ 0.08
BRPF3-206ENST00000449261 MYO15BQ96JP2 1530 aa15.53■□□□□ 0.08
BRPF3-206ENST00000449261 PKNOX2Q96KN3 472 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms