RNA–Protein interactions for RNA: ENST00000449261.6

BRPF3-206, Transcript of bromodomain and PHD finger containing 3, humanhuman

TSL 5

Gene BRPF3, Length 4,816 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3-206ENST00000449261 DCAF8L2P0C7V8 631 aa20.28■□□□□ 0.84
BRPF3-206ENST00000449261 NISCHQ9Y2I1 1504 aa19.84■□□□□ 0.77
BRPF3-206ENST00000449261 MYT1Q01538 1121 aa19.39■□□□□ 0.69
BRPF3-206ENST00000449261 PELP1Q8IZL8 1130 aaKnown RBP19.25■□□□□ 0.67
BRPF3-206ENST00000449261 SUPT5HO00267 1087 aaKnown RBP19.13■□□□□ 0.65
BRPF3-206ENST00000449261 SHROOM4Q9ULL8 1493 aa18.92■□□□□ 0.62
BRPF3-206ENST00000449261 EHMT2Q96KQ7 1210 aa18.37■□□□□ 0.53
BRPF3-206ENST00000449261 TTBK1Q5TCY1 1321 aaPredicted RBP18.28■□□□□ 0.52
BRPF3-206ENST00000449261 FAM9AQ8IZU1 332 aaPredicted RBP18.02■□□□□ 0.47
BRPF3-206ENST00000449261 APLP2Q06481 763 aa17.97■□□□□ 0.47
BRPF3-206ENST00000449261 ERICH6Q7L0X2 663 aa17.92■□□□□ 0.46
BRPF3-206ENST00000449261 TRIM41Q8WV44 630 aa17.74■□□□□ 0.43
BRPF3-206ENST00000449261 RANGAP1P46060 587 aaPredicted RBP17.65■□□□□ 0.42
BRPF3-206ENST00000449261 PCGF6Q9BYE7 350 aa17.56■□□□□ 0.4
BRPF3-206ENST00000449261 UBTFP17480 764 aaKnown RBP17.5■□□□□ 0.39
BRPF3-206ENST00000449261 ATP1B4Q9UN42 357 aaPredicted RBP17.47■□□□□ 0.39
BRPF3-206ENST00000449261 SLC24A1O60721 1099 aa17.36■□□□□ 0.37
BRPF3-206ENST00000449261 CCER1Q8TC90 406 aaPredicted RBP17.26■□□□□ 0.35
BRPF3-206ENST00000449261 ABCC9O60706 1549 aa17.18■□□□□ 0.34
BRPF3-206ENST00000449261 ZEB1P37275 1124 aaPredicted RBP17.17■□□□□ 0.34
BRPF3-206ENST00000449261 PPARGC1BQ86YN6 1023 aaKnown RBP17.12■□□□□ 0.33
BRPF3-206ENST00000449261 CHIC1Q5VXU3 224 aa17.06■□□□□ 0.32
BRPF3-206ENST00000449261 PABPN1Q86U42 306 aaKnown RBP eCLIP17.05■□□□□ 0.32
BRPF3-206ENST00000449261 CENPBP07199 599 aaPredicted RBP17■□□□□ 0.31
BRPF3-206ENST00000449261 LOC105371045A0A1W2PR82 267 aa16.98■□□□□ 0.31
BRPF3-206ENST00000449261 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.93■□□□□ 0.3
BRPF3-206ENST00000449261 HNRNPUL2Q1KMD3 747 aaKnown RBP16.93■□□□□ 0.3
BRPF3-206ENST00000449261 TRIM26Q12899 539 aaPredicted RBP16.9■□□□□ 0.3
BRPF3-206ENST00000449261 ITGAEP38570 1179 aa16.87■□□□□ 0.29
BRPF3-206ENST00000449261 MYT1LQ9UL68 1186 aa16.79■□□□□ 0.28
BRPF3-206ENST00000449261 PRKCSHP14314 528 aaPredicted RBP16.68■□□□□ 0.26
BRPF3-206ENST00000449261 YTHDC1Q96MU7 727 aaKnown RBP16.67■□□□□ 0.26
BRPF3-206ENST00000449261 NEFLP07196 543 aa16.6■□□□□ 0.25
BRPF3-206ENST00000449261 BCL11AQ9H165 835 aa16.6■□□□□ 0.25
BRPF3-206ENST00000449261 HRCP23327 699 aa16.56■□□□□ 0.24
BRPF3-206ENST00000449261 POLR3GLQ9BT43 218 aa16.56■□□□□ 0.24
BRPF3-206ENST00000449261 EIF5BO60841 1220 aaKnown RBP16.48■□□□□ 0.23
BRPF3-206ENST00000449261 FAM50AQ14320 339 aaKnown RBP16.48■□□□□ 0.23
BRPF3-206ENST00000449261 FBLN2P98095 1184 aa16.45■□□□□ 0.22
BRPF3-206ENST00000449261 SCRIBQ14160 1630 aa16.41■□□□□ 0.22
BRPF3-206ENST00000449261 ZCCHC6Q5VYS8 1495 aaKnown RBP16.4■□□□□ 0.22
BRPF3-206ENST00000449261 CNGB1Q14028 1251 aaPredicted RBP16.38■□□□□ 0.21
BRPF3-206ENST00000449261 DAXXQ9UER7 740 aaPredicted RBP16.38■□□□□ 0.21
BRPF3-206ENST00000449261 CSRNP3Q8WYN3 585 aa16.36■□□□□ 0.21
BRPF3-206ENST00000449261 TRIM52Q96A61 297 aa16.35■□□□□ 0.21
BRPF3-206ENST00000449261 P3H3Q8IVL6 736 aa16.28■□□□□ 0.2
BRPF3-206ENST00000449261 SLC4A1APQ9BWU0 796 aaKnown RBP16.25■□□□□ 0.19
BRPF3-206ENST00000449261 NEUROD1Q13562 356 aa16.24■□□□□ 0.19
BRPF3-206ENST00000449261 CCDC180Q9P1Z9 1646 aa16.23■□□□□ 0.19
BRPF3-206ENST00000449261 ARID3CA6NKF2 412 aa16.21■□□□□ 0.19
BRPF3-206ENST00000449261 DIEXFQ68CQ4 756 aaKnown RBP16.17■□□□□ 0.18
BRPF3-206ENST00000449261 ZNF326Q5BKZ1 582 aaKnown RBP16.12■□□□□ 0.17
BRPF3-206ENST00000449261 GLIPR1L2Q4G1C9 344 aa16.09■□□□□ 0.17
BRPF3-206ENST00000449261 CDK11AQ9UQ88 783 aaPredicted RBP16.07■□□□□ 0.16
BRPF3-206ENST00000449261 ZNF777Q9ULD5 760 aaPredicted RBP16.06■□□□□ 0.16
BRPF3-206ENST00000449261 RB1CC1Q8TDY2 1594 aa16.02■□□□□ 0.15
BRPF3-206ENST00000449261 SCAF1Q9H7N4 1312 aaKnown RBP16.01■□□□□ 0.15
BRPF3-206ENST00000449261 GTF3C3Q9Y5Q9 886 aa15.96■□□□□ 0.15
BRPF3-206ENST00000449261 ANP32CO43423 234 aa15.93■□□□□ 0.14
BRPF3-206ENST00000449261 ANP32EQ9BTT0 268 aa15.91■□□□□ 0.14
BRPF3-206ENST00000449261 ZNF316A6NFI3 1004 aaPredicted RBP15.89■□□□□ 0.14
BRPF3-206ENST00000449261 RSF1Q96T23 1441 aaPredicted RBP15.89■□□□□ 0.13
BRPF3-206ENST00000449261 NPM1P06748 294 aaKnown RBP eCLIP15.88■□□□□ 0.13
BRPF3-206ENST00000449261 NACADO15069 1562 aa15.88■□□□□ 0.13
BRPF3-206ENST00000449261 ACIN1Q9UKV3 1341 aaKnown RBP15.87■□□□□ 0.13
BRPF3-206ENST00000449261 BCANQ96GW7 911 aa15.86■□□□□ 0.13
BRPF3-206ENST00000449261 CLSPNQ9HAW4 1339 aa15.84■□□□□ 0.13
BRPF3-206ENST00000449261 CHMP7Q8WUX9 453 aaPredicted RBP15.84■□□□□ 0.13
BRPF3-206ENST00000449261 ESF1Q9H501 851 aaKnown RBP15.79■□□□□ 0.12
BRPF3-206ENST00000449261 CHIC2Q9UKJ5 165 aa15.77■□□□□ 0.11
BRPF3-206ENST00000449261 PODXL2Q9NZ53 605 aa15.77■□□□□ 0.11
BRPF3-206ENST00000449261 DCAF1Q9Y4B6 1507 aa15.75■□□□□ 0.11
BRPF3-206ENST00000449261 BAZ1BQ9UIG0 1483 aaKnown RBP15.75■□□□□ 0.11
BRPF3-206ENST00000449261 CHGAP10645 457 aaKnown RBP15.75■□□□□ 0.11
BRPF3-206ENST00000449261 TONSLQ96HA7 1378 aa15.75■□□□□ 0.11
BRPF3-206ENST00000449261 MTUS2Q5JR59 1369 aa15.74■□□□□ 0.11
BRPF3-206ENST00000449261 CLIP1P30622 1438 aa15.73■□□□□ 0.11
BRPF3-206ENST00000449261 TSPY4P0CV99 314 aa15.71■□□□□ 0.11
BRPF3-206ENST00000449261 TSPY10P0CW01 314 aa15.71■□□□□ 0.11
BRPF3-206ENST00000449261 WRNQ14191 1432 aaPredicted RBP eCLIP15.7■□□□□ 0.1
BRPF3-206ENST00000449261 STAG3Q9UJ98 1225 aa15.7■□□□□ 0.1
BRPF3-206ENST00000449261 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.68■□□□□ 0.17e-7■□□□□ 9.8
BRPF3-206ENST00000449261 NEFMP07197 916 aa15.68■□□□□ 0.1
BRPF3-206ENST00000449261 EEA1Q15075 1411 aa15.68■□□□□ 0.1
BRPF3-206ENST00000449261 PLPPR3Q6T4P5 718 aa15.64■□□□□ 0.09
BRPF3-206ENST00000449261 RTL5Q5HYW3 569 aaPredicted RBP15.64■□□□□ 0.09
BRPF3-206ENST00000449261 CECR2Q9BXF3 1484 aa15.62■□□□□ 0.09
BRPF3-206ENST00000449261 GOLGA3Q08378 1498 aa15.61■□□□□ 0.09
BRPF3-206ENST00000449261 BAZ1AQ9NRL2 1556 aaPredicted RBP15.61■□□□□ 0.09
BRPF3-206ENST00000449261 ZBTB47Q9UFB7 747 aaPredicted RBP15.61■□□□□ 0.09
BRPF3-206ENST00000449261 CANXP27824 592 aaKnown RBP15.6■□□□□ 0.09
BRPF3-206ENST00000449261 KIF27Q86VH2 1401 aa15.6■□□□□ 0.09
BRPF3-206ENST00000449261 KCNH8Q96L42 1107 aa15.58■□□□□ 0.08
BRPF3-206ENST00000449261 PLEKHD1A6NEE1 506 aa15.58■□□□□ 0.08
BRPF3-206ENST00000449261 CEP162Q5TB80 1403 aa15.57■□□□□ 0.08
BRPF3-206ENST00000449261 DDX10Q13206 875 aaKnown RBP15.57■□□□□ 0.08
BRPF3-206ENST00000449261 RRP7BPQ9NSQ0 103 aa15.55■□□□□ 0.08
BRPF3-206ENST00000449261 KDM2AQ9Y2K7 1162 aa15.54■□□□□ 0.08
BRPF3-206ENST00000449261 MYO15BQ96JP2 1530 aa15.53■□□□□ 0.08
BRPF3-206ENST00000449261 PKNOX2Q96KN3 472 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms