RNA–Protein interactions for RNA: ENST00000262215.7

ARFGEF1-201, Transcript of ADP ribosylation factor guanine nucleotide exchange factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ARFGEF1, Length 7,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1-201ENST00000262215 DCAF8L2P0C7V8 631 aa21.38■■□□□ 1.01
ARFGEF1-201ENST00000262215 EHMT2Q96KQ7 1210 aa20.4■□□□□ 0.86
ARFGEF1-201ENST00000262215 SUPT5HO00267 1087 aaKnown RBP20.18■□□□□ 0.82
ARFGEF1-201ENST00000262215 PELP1Q8IZL8 1130 aaKnown RBP20.15■□□□□ 0.82
ARFGEF1-201ENST00000262215 ERICH6Q7L0X2 663 aa19.72■□□□□ 0.75
ARFGEF1-201ENST00000262215 TTBK1Q5TCY1 1321 aaPredicted RBP19.7■□□□□ 0.74
ARFGEF1-201ENST00000262215 SHROOM4Q9ULL8 1493 aa19.52■□□□□ 0.72
ARFGEF1-201ENST00000262215 APLP2Q06481 763 aa19.46■□□□□ 0.71
ARFGEF1-201ENST00000262215 MYT1Q01538 1121 aa19.34■□□□□ 0.69
ARFGEF1-201ENST00000262215 FAM9AQ8IZU1 332 aaPredicted RBP19.31■□□□□ 0.68
ARFGEF1-201ENST00000262215 PCGF6Q9BYE7 350 aa19.3■□□□□ 0.68
ARFGEF1-201ENST00000262215 RANGAP1P46060 587 aaPredicted RBP19.28■□□□□ 0.68
ARFGEF1-201ENST00000262215 CCER1Q8TC90 406 aaPredicted RBP19.27■□□□□ 0.68
ARFGEF1-201ENST00000262215 YTHDC1Q96MU7 727 aaKnown RBP19.12■□□□□ 0.65
ARFGEF1-201ENST00000262215 CENPBP07199 599 aaPredicted RBP19.1■□□□□ 0.65
ARFGEF1-201ENST00000262215 ATP1B4Q9UN42 357 aaPredicted RBP19.05■□□□□ 0.64
ARFGEF1-201ENST00000262215 NEFLP07196 543 aa18.91■□□□□ 0.62
ARFGEF1-201ENST00000262215 DAXXQ9UER7 740 aaPredicted RBP18.68■□□□□ 0.58
ARFGEF1-201ENST00000262215 CNGB1Q14028 1251 aaPredicted RBP18.66■□□□□ 0.58
ARFGEF1-201ENST00000262215 PPARGC1BQ86YN6 1023 aaKnown RBP18.62■□□□□ 0.57
ARFGEF1-201ENST00000262215 POLR3GLQ9BT43 218 aa18.62■□□□□ 0.57
ARFGEF1-201ENST00000262215 ZEB1P37275 1124 aaPredicted RBP18.51■□□□□ 0.55
ARFGEF1-201ENST00000262215 UBTFP17480 764 aaKnown RBP18.47■□□□□ 0.55
ARFGEF1-201ENST00000262215 CHIC1Q5VXU3 224 aa18.42■□□□□ 0.54
ARFGEF1-201ENST00000262215 MYT1LQ9UL68 1186 aa18.39■□□□□ 0.54
ARFGEF1-201ENST00000262215 TRIM41Q8WV44 630 aa18.37■□□□□ 0.53
ARFGEF1-201ENST00000262215 ITGAEP38570 1179 aa18.32■□□□□ 0.52
ARFGEF1-201ENST00000262215 SLC4A1APQ9BWU0 796 aaKnown RBP18.28■□□□□ 0.52
ARFGEF1-201ENST00000262215 ZNF316A6NFI3 1004 aaPredicted RBP18.22■□□□□ 0.51
ARFGEF1-201ENST00000262215 CLSPNQ9HAW4 1339 aa18.22■□□□□ 0.51
ARFGEF1-201ENST00000262215 HRCP23327 699 aa18.17■□□□□ 0.5
ARFGEF1-201ENST00000262215 RTL5Q5HYW3 569 aaPredicted RBP18.16■□□□□ 0.5
ARFGEF1-201ENST00000262215 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.14■□□□□ 0.5
ARFGEF1-201ENST00000262215 HNRNPUL2Q1KMD3 747 aaKnown RBP18.14■□□□□ 0.5
ARFGEF1-201ENST00000262215 BCL11AQ9H165 835 aa18.07■□□□□ 0.48
ARFGEF1-201ENST00000262215 BCANQ96GW7 911 aa17.96■□□□□ 0.47
ARFGEF1-201ENST00000262215 NISCHQ9Y2I1 1504 aa17.89■□□□□ 0.45
ARFGEF1-201ENST00000262215 SLC24A1O60721 1099 aa17.82■□□□□ 0.44
ARFGEF1-201ENST00000262215 TRIM26Q12899 539 aaPredicted RBP17.81■□□□□ 0.44
ARFGEF1-201ENST00000262215 LOC105371045A0A1W2PR82 267 aa17.67■□□□□ 0.42
ARFGEF1-201ENST00000262215 ZBTB47Q9UFB7 747 aaPredicted RBP17.66■□□□□ 0.42
ARFGEF1-201ENST00000262215 GTF3C3Q9Y5Q9 886 aa17.66■□□□□ 0.42
ARFGEF1-201ENST00000262215 EIF5BO60841 1220 aaKnown RBP17.66■□□□□ 0.42
ARFGEF1-201ENST00000262215 DIEXFQ68CQ4 756 aaKnown RBP17.65■□□□□ 0.42
ARFGEF1-201ENST00000262215 NEUROD1Q13562 356 aa17.61■□□□□ 0.41
ARFGEF1-201ENST00000262215 ZNF326Q5BKZ1 582 aaKnown RBP17.6■□□□□ 0.41
ARFGEF1-201ENST00000262215 TRIM52Q96A61 297 aa17.55■□□□□ 0.4
ARFGEF1-201ENST00000262215 CDK11AQ9UQ88 783 aaPredicted RBP17.54■□□□□ 0.4
ARFGEF1-201ENST00000262215 NPM2Q86SE8 214 aaKnown RBP17.54■□□□□ 0.4
ARFGEF1-201ENST00000262215 FAM50AQ14320 339 aaKnown RBP17.53■□□□□ 0.4
ARFGEF1-201ENST00000262215 CANXP27824 592 aaKnown RBP17.53■□□□□ 0.4
ARFGEF1-201ENST00000262215 ARXQ96QS3 562 aa17.37■□□□□ 0.37
ARFGEF1-201ENST00000262215 ANP32CO43423 234 aa17.34■□□□□ 0.37
ARFGEF1-201ENST00000262215 ANP32AP39687 249 aaKnown RBP17.29■□□□□ 0.36
ARFGEF1-201ENST00000262215 ACIN1Q9UKV3 1341 aaKnown RBP17.27■□□□□ 0.36
ARFGEF1-201ENST00000262215 HSP90AA1P07900 732 aaKnown RBP17.26■□□□□ 0.35
ARFGEF1-201ENST00000262215 ANP32BQ92688 251 aaKnown RBP17.24■□□□□ 0.35
ARFGEF1-201ENST00000262215 NEFMP07197 916 aa17.22■□□□□ 0.35
ARFGEF1-201ENST00000262215 PLPPR3Q6T4P5 718 aa17.19■□□□□ 0.34
ARFGEF1-201ENST00000262215 NBR1Q14596 966 aa17.18■□□□□ 0.34
ARFGEF1-201ENST00000262215 ARID3CA6NKF2 412 aa17.15■□□□□ 0.34
ARFGEF1-201ENST00000262215 SALL2Q9Y467 1007 aaPredicted RBP17.14■□□□□ 0.33
ARFGEF1-201ENST00000262215 GLIPR1L2Q4G1C9 344 aa17.07■□□□□ 0.32
ARFGEF1-201ENST00000262215 FBLN2P98095 1184 aa17.07■□□□□ 0.32
ARFGEF1-201ENST00000262215 FKBP8Q14318 412 aa17.06■□□□□ 0.32
ARFGEF1-201ENST00000262215 SCAF1Q9H7N4 1312 aaKnown RBP17.01■□□□□ 0.31
ARFGEF1-201ENST00000262215 A0A0G2JS52 829 aa16.96■□□□□ 0.31
ARFGEF1-201ENST00000262215 UPF2Q9HAU5 1272 aaKnown RBP16.96■□□□□ 0.31
ARFGEF1-201ENST00000262215 TULP1O00294 542 aaPredicted RBP16.94■□□□□ 0.3
ARFGEF1-201ENST00000262215 PLEKHG5O94827 1062 aa16.94■□□□□ 0.3
ARFGEF1-201ENST00000262215 FAM9BQ8IZU0 186 aa16.94■□□□□ 0.3
ARFGEF1-201ENST00000262215 CHGAP10645 457 aaKnown RBP16.93■□□□□ 0.3
ARFGEF1-201ENST00000262215 CDK11BP21127 795 aaKnown RBP16.93■□□□□ 0.3
ARFGEF1-201ENST00000262215 P3H3Q8IVL6 736 aa16.93■□□□□ 0.3
ARFGEF1-201ENST00000262215 ZNF777Q9ULD5 760 aaPredicted RBP16.93■□□□□ 0.3
ARFGEF1-201ENST00000262215 TPRNQ4KMQ1 711 aa16.91■□□□□ 0.3
ARFGEF1-201ENST00000262215 HNRNPUQ00839 825 aaKnown RBP eCLIP16.87■□□□□ 0.29
ARFGEF1-201ENST00000262215 SENP3Q9H4L4 574 aaPredicted RBP16.86■□□□□ 0.29
ARFGEF1-201ENST00000262215 IRX6P78412 446 aaPredicted RBP16.85■□□□□ 0.29
ARFGEF1-201ENST00000262215 STAG3Q9UJ98 1225 aa16.82■□□□□ 0.28
ARFGEF1-201ENST00000262215 CCDC136Q96JN2 1154 aa16.79■□□□□ 0.28
ARFGEF1-201ENST00000262215 ZBTB7CA1YPR0 619 aa16.77■□□□□ 0.27
ARFGEF1-201ENST00000262215 ESF1Q9H501 851 aaKnown RBP16.76■□□□□ 0.27
ARFGEF1-201ENST00000262215 TAOK2Q9UL54 1235 aa16.75■□□□□ 0.27
ARFGEF1-201ENST00000262215 SENP3-EIF4A1A0A087X0R7 540 aa16.75■□□□□ 0.27
ARFGEF1-201ENST00000262215 DDX10Q13206 875 aaKnown RBP16.74■□□□□ 0.27
ARFGEF1-201ENST00000262215 AMER1Q5JTC6 1135 aaPredicted RBP16.74■□□□□ 0.27
ARFGEF1-201ENST00000262215 NCLP19338 710 aaKnown RBP16.71■□□□□ 0.27
ARFGEF1-201ENST00000262215 NCBP3Q53F19 620 aaKnown RBP16.71■□□□□ 0.27
ARFGEF1-201ENST00000262215 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.69■□□□□ 0.26
ARFGEF1-201ENST00000262215 RTN4Q9NQC3 1192 aaKnown RBP16.69■□□□□ 0.26
ARFGEF1-201ENST00000262215 TRIM44Q96DX7 344 aaPredicted RBP16.67■□□□□ 0.26
ARFGEF1-201ENST00000262215 TMC1Q8TDI8 760 aa16.64■□□□□ 0.25
ARFGEF1-201ENST00000262215 PABPN1Q86U42 306 aaKnown RBP eCLIP16.63■□□□□ 0.25
ARFGEF1-201ENST00000262215 DNTTIP2Q5QJE6 756 aaKnown RBP16.63■□□□□ 0.25
ARFGEF1-201ENST00000262215 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.62■□□□□ 0.251e-6■■□□□ 12.7
ARFGEF1-201ENST00000262215 PTMAP06454 111 aaKnown RBP16.61■□□□□ 0.25
ARFGEF1-201ENST00000262215 WDR43Q15061 677 aaKnown RBP eCLIP16.6■□□□□ 0.25
ARFGEF1-201ENST00000262215 HIRIP3Q9BW71 556 aaPredicted RBP16.6■□□□□ 0.25
ARFGEF1-201ENST00000262215 KDM2AQ9Y2K7 1162 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms