RNA–Protein interactions for RNA: ENST00000377499.9

LMO7-204, Transcript of LIM domain 7, humanhuman

TSL 2

Gene LMO7, Length 3,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO7-204ENST00000377499 NISCHQ9Y2I1 1504 aa25.37■■□□□ 1.65
LMO7-204ENST00000377499 CCDC180Q9P1Z9 1646 aa21.84■■□□□ 1.09
LMO7-204ENST00000377499 DCAF8L2P0C7V8 631 aa21.78■■□□□ 1.08
LMO7-204ENST00000377499 SHROOM4Q9ULL8 1493 aa21.35■■□□□ 1.01
LMO7-204ENST00000377499 ZCCHC6Q5VYS8 1495 aaKnown RBP21.25■□□□□ 0.99
LMO7-204ENST00000377499 ABCC9O60706 1549 aa21.17■□□□□ 0.98
LMO7-204ENST00000377499 DCAF1Q9Y4B6 1507 aa20.73■□□□□ 0.91
LMO7-204ENST00000377499 SUPT5HO00267 1087 aaKnown RBP20.67■□□□□ 0.9
LMO7-204ENST00000377499 SCRIBQ14160 1630 aa20.5■□□□□ 0.87
LMO7-204ENST00000377499 NACADO15069 1562 aa20.49■□□□□ 0.87
LMO7-204ENST00000377499 MYO15BQ96JP2 1530 aa20.41■□□□□ 0.86
LMO7-204ENST00000377499 RB1CC1Q8TDY2 1594 aa20.38■□□□□ 0.85
LMO7-204ENST00000377499 PABPN1Q86U42 306 aaKnown RBP eCLIP20.17■□□□□ 0.82
LMO7-204ENST00000377499 CECR2Q9BXF3 1484 aa19.86■□□□□ 0.77
LMO7-204ENST00000377499 RSF1Q96T23 1441 aaPredicted RBP19.81■□□□□ 0.76
LMO7-204ENST00000377499 UNC13AQ9UPW8 1703 aa19.78■□□□□ 0.76
LMO7-204ENST00000377499 MROH2BQ7Z745 1585 aa19.68■□□□□ 0.74
LMO7-204ENST00000377499 BICRAQ9NZM4 1560 aa19.64■□□□□ 0.74
LMO7-204ENST00000377499 BAZ1AQ9NRL2 1556 aaPredicted RBP19.6■□□□□ 0.73
LMO7-204ENST00000377499 WIZO95785 1651 aa19.52■□□□□ 0.72
LMO7-204ENST00000377499 CHIC1Q5VXU3 224 aa19.51■□□□□ 0.71
LMO7-204ENST00000377499 SMARCA4P51532 1647 aa19.46■□□□□ 0.7
LMO7-204ENST00000377499 TRIM41Q8WV44 630 aa19.3■□□□□ 0.68
LMO7-204ENST00000377499 TOP2AP11388 1531 aaKnown RBP19.22■□□□□ 0.67
LMO7-204ENST00000377499 BAZ1BQ9UIG0 1483 aaKnown RBP19.21■□□□□ 0.67
LMO7-204ENST00000377499 ATAD2BQ9ULI0 1458 aa19.21■□□□□ 0.67
LMO7-204ENST00000377499 EIF4G1Q04637 1599 aaKnown RBP19.18■□□□□ 0.66
LMO7-204ENST00000377499 FAM9AQ8IZU1 332 aaPredicted RBP19.17■□□□□ 0.66
LMO7-204ENST00000377499 PELP1Q8IZL8 1130 aaKnown RBP19.17■□□□□ 0.66
LMO7-204ENST00000377499 CCDC88BA6NC98 1476 aa19.17■□□□□ 0.66
LMO7-204ENST00000377499 SMARCA2P51531 1590 aa19.15■□□□□ 0.66
LMO7-204ENST00000377499 EHMT2Q96KQ7 1210 aa19.1■□□□□ 0.65
LMO7-204ENST00000377499 PEG3Q9GZU2 1588 aa19.02■□□□□ 0.63
LMO7-204ENST00000377499 LOC105371045A0A1W2PR82 267 aa18.98■□□□□ 0.63
LMO7-204ENST00000377499 NCAPD3P42695 1498 aa18.96■□□□□ 0.63
LMO7-204ENST00000377499 CC2D2AQ9P2K1 1620 aa18.91■□□□□ 0.62
LMO7-204ENST00000377499 ABCC8Q09428 1581 aa18.87■□□□□ 0.61
LMO7-204ENST00000377499 HMGXB3Q12766 1538 aa18.84■□□□□ 0.61
LMO7-204ENST00000377499 WRNQ14191 1432 aaPredicted RBP eCLIP18.73■□□□□ 0.59
LMO7-204ENST00000377499 DNAJC5BQ9UF47 199 aa18.69■□□□□ 0.58
LMO7-204ENST00000377499 MYT1Q01538 1121 aa18.66■□□□□ 0.58
LMO7-204ENST00000377499 CADPSQ9ULU8 1353 aa18.63■□□□□ 0.57
LMO7-204ENST00000377499 CFTRP13569 1480 aa18.58■□□□□ 0.57
LMO7-204ENST00000377499 SOGA1O94964 1423 aa18.57■□□□□ 0.56
LMO7-204ENST00000377499 UBTFP17480 764 aaKnown RBP18.57■□□□□ 0.56
LMO7-204ENST00000377499 CSRNP3Q8WYN3 585 aa18.55■□□□□ 0.56
LMO7-204ENST00000377499 NESP48681 1621 aa18.51■□□□□ 0.55
LMO7-204ENST00000377499 SYNJ1O43426 1573 aa18.51■□□□□ 0.55
LMO7-204ENST00000377499 RANGAP1P46060 587 aaPredicted RBP18.49■□□□□ 0.55
LMO7-204ENST00000377499 RUSC2Q8N2Y8 1516 aa18.47■□□□□ 0.55
LMO7-204ENST00000377499 FANCD2Q9BXW9 1451 aa18.44■□□□□ 0.54
LMO7-204ENST00000377499 EEA1Q15075 1411 aa18.38■□□□□ 0.53
LMO7-204ENST00000377499 CUX1P39880 1505 aa18.37■□□□□ 0.53
LMO7-204ENST00000377499 TOP2BQ02880 1626 aa18.35■□□□□ 0.53
LMO7-204ENST00000377499 PDS5BQ9NTI5 1447 aa18.34■□□□□ 0.53
LMO7-204ENST00000377499 PPARGC1BQ86YN6 1023 aaKnown RBP18.33■□□□□ 0.53
LMO7-204ENST00000377499 CEP164Q9UPV0 1460 aa18.32■□□□□ 0.52
LMO7-204ENST00000377499 HRCP23327 699 aa18.29■□□□□ 0.52
LMO7-204ENST00000377499 PCGF6Q9BYE7 350 aa18.28■□□□□ 0.52
LMO7-204ENST00000377499 LAMC3Q9Y6N6 1575 aa18.28■□□□□ 0.52
LMO7-204ENST00000377499 KIF27Q86VH2 1401 aa18.27■□□□□ 0.52
LMO7-204ENST00000377499 TTBK1Q5TCY1 1321 aaPredicted RBP18.26■□□□□ 0.51
LMO7-204ENST00000377499 CUX2O14529 1486 aa18.26■□□□□ 0.51
LMO7-204ENST00000377499 FGD5Q6ZNL6 1462 aa18.25■□□□□ 0.51
LMO7-204ENST00000377499 BIVM-ERCC5R4GMW8 1640 aa18.24■□□□□ 0.51
LMO7-204ENST00000377499 GOLGA3Q08378 1498 aa18.23■□□□□ 0.51
LMO7-204ENST00000377499 PRDM2Q13029 1718 aa18.22■□□□□ 0.51
LMO7-204ENST00000377499 ERCC6Q03468 1493 aa18.2■□□□□ 0.5
LMO7-204ENST00000377499 RAD54L2Q9Y4B4 1467 aa18.18■□□□□ 0.5
LMO7-204ENST00000377499 TOPBP1Q92547 1522 aa18.18■□□□□ 0.5
LMO7-204ENST00000377499 TNIKQ9UKE5 1360 aa18.17■□□□□ 0.5
LMO7-204ENST00000377499 CEP162Q5TB80 1403 aa18.16■□□□□ 0.5
LMO7-204ENST00000377499 RAPGEF2Q9Y4G8 1499 aa18.14■□□□□ 0.5
LMO7-204ENST00000377499 DNMBPQ6XZF7 1577 aa18.13■□□□□ 0.49
LMO7-204ENST00000377499 TDRD9Q8NDG6 1382 aaKnown RBP18.12■□□□□ 0.49
LMO7-204ENST00000377499 URB2Q14146 1524 aaKnown RBP18.12■□□□□ 0.49
LMO7-204ENST00000377499 POLA1P09884 1462 aaPredicted RBP18.12■□□□□ 0.49
LMO7-204ENST00000377499 KIF21AQ7Z4S6 1674 aa18.08■□□□□ 0.49
LMO7-204ENST00000377499 APLP2Q06481 763 aa18.08■□□□□ 0.49
LMO7-204ENST00000377499 SCAF1Q9H7N4 1312 aaKnown RBP18.08■□□□□ 0.48
LMO7-204ENST00000377499 IGF1RP08069 1367 aa18.06■□□□□ 0.48
LMO7-204ENST00000377499 CARMIL1Q5VZK9 1371 aa18.06■□□□□ 0.48
LMO7-204ENST00000377499 CLIP1P30622 1438 aa18.04■□□□□ 0.48
LMO7-204ENST00000377499 TRIM26Q12899 539 aaPredicted RBP18.04■□□□□ 0.48
LMO7-204ENST00000377499 KIF21BO75037 1637 aa18.02■□□□□ 0.48
LMO7-204ENST00000377499 MRC2Q9UBG0 1479 aa18.02■□□□□ 0.47
LMO7-204ENST00000377499 PRXQ9BXM0 1461 aa17.99■□□□□ 0.47
LMO7-204ENST00000377499 ATP1B4Q9UN42 357 aaPredicted RBP17.99■□□□□ 0.47
LMO7-204ENST00000377499 P3H3Q8IVL6 736 aa17.98■□□□□ 0.47
LMO7-204ENST00000377499 ABCA10Q8WWZ4 1543 aa17.96■□□□□ 0.47
LMO7-204ENST00000377499 FBLN2P98095 1184 aa17.94■□□□□ 0.46
LMO7-204ENST00000377499 GAPVD1Q14C86 1478 aa17.93■□□□□ 0.46
LMO7-204ENST00000377499 AQRO60306 1485 aaKnown RBP eCLIP17.92■□□□□ 0.464e-8■□□□□ 9.8
LMO7-204ENST00000377499 ERICH3Q5RHP9 1530 aa17.9■□□□□ 0.46
LMO7-204ENST00000377499 PRKCSHP14314 528 aaPredicted RBP17.88■□□□□ 0.45
LMO7-204ENST00000377499 IFT140Q96RY7 1462 aa17.8■□□□□ 0.44
LMO7-204ENST00000377499 ZNF608Q9ULD9 1512 aaPredicted RBP17.8■□□□□ 0.44
LMO7-204ENST00000377499 CHMP7Q8WUX9 453 aaPredicted RBP17.8■□□□□ 0.44
LMO7-204ENST00000377499 VPS8Q8N3P4 1428 aa17.79■□□□□ 0.44
LMO7-204ENST00000377499 WDR62O43379 1518 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms