RNA–Protein interactions for RNA: ENST00000339717.11

BRPF3-201, Transcript of bromodomain and PHD finger containing 3, humanhuman

TSL 5 BASIC

Gene BRPF3, Length 4,820 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3-201ENST00000339717 MYT1Q01538 1121 aa22.2■■□□□ 1.14
BRPF3-201ENST00000339717 PELP1Q8IZL8 1130 aaKnown RBP22.15■■□□□ 1.14
BRPF3-201ENST00000339717 TTBK1Q5TCY1 1321 aaPredicted RBP20.66■□□□□ 0.9
BRPF3-201ENST00000339717 CENPBP07199 599 aaPredicted RBP20.13■□□□□ 0.81
BRPF3-201ENST00000339717 ERICH6Q7L0X2 663 aa20.12■□□□□ 0.81
BRPF3-201ENST00000339717 ZEB1P37275 1124 aaPredicted RBP19.8■□□□□ 0.76
BRPF3-201ENST00000339717 HRCP23327 699 aa19.79■□□□□ 0.76
BRPF3-201ENST00000339717 CCER1Q8TC90 406 aaPredicted RBP19.65■□□□□ 0.74
BRPF3-201ENST00000339717 PCGF6Q9BYE7 350 aa19.6■□□□□ 0.73
BRPF3-201ENST00000339717 DCAF8L2P0C7V8 631 aa19.48■□□□□ 0.71
BRPF3-201ENST00000339717 NISCHQ9Y2I1 1504 aa19.45■□□□□ 0.7
BRPF3-201ENST00000339717 YTHDC1Q96MU7 727 aaKnown RBP19.12■□□□□ 0.65
BRPF3-201ENST00000339717 NEFLP07196 543 aa18.95■□□□□ 0.62
BRPF3-201ENST00000339717 GTF3C3Q9Y5Q9 886 aa18.94■□□□□ 0.62
BRPF3-201ENST00000339717 SUPT5HO00267 1087 aaKnown RBP18.93■□□□□ 0.62
BRPF3-201ENST00000339717 PPARGC1BQ86YN6 1023 aaKnown RBP18.92■□□□□ 0.62
BRPF3-201ENST00000339717 BCL11AQ9H165 835 aa18.85■□□□□ 0.61
BRPF3-201ENST00000339717 ACIN1Q9UKV3 1341 aaKnown RBP18.85■□□□□ 0.61
BRPF3-201ENST00000339717 MYT1LQ9UL68 1186 aa18.76■□□□□ 0.59
BRPF3-201ENST00000339717 TRIM26Q12899 539 aaPredicted RBP18.74■□□□□ 0.59
BRPF3-201ENST00000339717 GLIPR1L2Q4G1C9 344 aa18.74■□□□□ 0.59
BRPF3-201ENST00000339717 SCAF1Q9H7N4 1312 aaKnown RBP18.71■□□□□ 0.59
BRPF3-201ENST00000339717 RTL5Q5HYW3 569 aaPredicted RBP18.71■□□□□ 0.59
BRPF3-201ENST00000339717 ANP32EQ9BTT0 268 aa18.54■□□□□ 0.56
BRPF3-201ENST00000339717 CLSPNQ9HAW4 1339 aa18.49■□□□□ 0.55
BRPF3-201ENST00000339717 DIEXFQ68CQ4 756 aaKnown RBP18.49■□□□□ 0.55
BRPF3-201ENST00000339717 SLC24A1O60721 1099 aa18.45■□□□□ 0.54
BRPF3-201ENST00000339717 EIF5BO60841 1220 aaKnown RBP18.42■□□□□ 0.54
BRPF3-201ENST00000339717 PRKCSHP14314 528 aaPredicted RBP18.35■□□□□ 0.53
BRPF3-201ENST00000339717 DAXXQ9UER7 740 aaPredicted RBP18.26■□□□□ 0.51
BRPF3-201ENST00000339717 NEUROD1Q13562 356 aa18.24■□□□□ 0.51
BRPF3-201ENST00000339717 SHROOM4Q9ULL8 1493 aa18.23■□□□□ 0.51
BRPF3-201ENST00000339717 RANGAP1P46060 587 aaPredicted RBP18.2■□□□□ 0.5
BRPF3-201ENST00000339717 CDK11AQ9UQ88 783 aaPredicted RBP18.12■□□□□ 0.49
BRPF3-201ENST00000339717 APLP2Q06481 763 aa18.02■□□□□ 0.48
BRPF3-201ENST00000339717 FAM9AQ8IZU1 332 aaPredicted RBP18■□□□□ 0.47
BRPF3-201ENST00000339717 ZNF316A6NFI3 1004 aaPredicted RBP18■□□□□ 0.47
BRPF3-201ENST00000339717 EHMT2Q96KQ7 1210 aa17.93■□□□□ 0.46
BRPF3-201ENST00000339717 BCANQ96GW7 911 aa17.92■□□□□ 0.46
BRPF3-201ENST00000339717 ERICH6BQ5W0A0 696 aa17.84■□□□□ 0.45
BRPF3-201ENST00000339717 ANP32AP39687 249 aaKnown RBP17.84■□□□□ 0.45
BRPF3-201ENST00000339717 CSRNP3Q8WYN3 585 aa17.81■□□□□ 0.44
BRPF3-201ENST00000339717 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.7■□□□□ 0.42
BRPF3-201ENST00000339717 CHIC1Q5VXU3 224 aa17.67■□□□□ 0.42
BRPF3-201ENST00000339717 NBR1Q14596 966 aa17.65■□□□□ 0.42
BRPF3-201ENST00000339717 DEKP35659 375 aaKnown RBP17.64■□□□□ 0.41
BRPF3-201ENST00000339717 FKBP8Q14318 412 aa17.6■□□□□ 0.41
BRPF3-201ENST00000339717 PODXL2Q9NZ53 605 aa17.6■□□□□ 0.41
BRPF3-201ENST00000339717 ZBTB47Q9UFB7 747 aaPredicted RBP17.56■□□□□ 0.4
BRPF3-201ENST00000339717 PKNOX2Q96KN3 472 aa17.55■□□□□ 0.4
BRPF3-201ENST00000339717 DCAF1Q9Y4B6 1507 aa17.55■□□□□ 0.4
BRPF3-201ENST00000339717 TNNT2P45379 298 aaPredicted RBP17.55■□□□□ 0.4
BRPF3-201ENST00000339717 TRIM41Q8WV44 630 aa17.55■□□□□ 0.4
BRPF3-201ENST00000339717 NCLP19338 710 aaKnown RBP17.54■□□□□ 0.4
BRPF3-201ENST00000339717 LOC105371045A0A1W2PR82 267 aa17.51■□□□□ 0.39
BRPF3-201ENST00000339717 RTN4Q9NQC3 1192 aaKnown RBP17.49■□□□□ 0.39
BRPF3-201ENST00000339717 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.42■□□□□ 0.38
BRPF3-201ENST00000339717 NEFMP07197 916 aa17.4■□□□□ 0.38
BRPF3-201ENST00000339717 SUPT16HQ9Y5B9 1047 aaKnown RBP17.38■□□□□ 0.37
BRPF3-201ENST00000339717 CDK11BP21127 795 aaKnown RBP17.34■□□□□ 0.37
BRPF3-201ENST00000339717 TSHZ2Q9NRE2 1034 aa17.34■□□□□ 0.37
BRPF3-201ENST00000339717 ANP32BQ92688 251 aaKnown RBP17.34■□□□□ 0.37
BRPF3-201ENST00000339717 CCDC136Q96JN2 1154 aa17.33■□□□□ 0.37
BRPF3-201ENST00000339717 RSPH6AQ9H0K4 717 aa17.32■□□□□ 0.36
BRPF3-201ENST00000339717 UBE2Q2Q8WVN8 375 aa17.31■□□□□ 0.36
BRPF3-201ENST00000339717 NAP1L5Q96NT1 182 aaPredicted RBP17.3■□□□□ 0.36
BRPF3-201ENST00000339717 NOP58Q9Y2X3 529 aaKnown RBP17.3■□□□□ 0.36
BRPF3-201ENST00000339717 PPM1GO15355 546 aaPredicted RBP17.3■□□□□ 0.36
BRPF3-201ENST00000339717 RBM19Q9Y4C8 960 aaKnown RBP17.3■□□□□ 0.36
BRPF3-201ENST00000339717 TRIM44Q96DX7 344 aaPredicted RBP17.3■□□□□ 0.36
BRPF3-201ENST00000339717 VSIG10Q8N0Z9 540 aa17.29■□□□□ 0.36
BRPF3-201ENST00000339717 ANO8Q9HCE9 1232 aaPredicted RBP17.29■□□□□ 0.36
BRPF3-201ENST00000339717 ANP32CO43423 234 aa17.28■□□□□ 0.36
BRPF3-201ENST00000339717 ZNF326Q5BKZ1 582 aaKnown RBP17.28■□□□□ 0.36
BRPF3-201ENST00000339717 NPM2Q86SE8 214 aaKnown RBP17.25■□□□□ 0.35
BRPF3-201ENST00000339717 HSP90AA1P07900 732 aaKnown RBP17.24■□□□□ 0.35
BRPF3-201ENST00000339717 MIER1Q8N108 512 aa17.24■□□□□ 0.35
BRPF3-201ENST00000339717 CCDC180Q9P1Z9 1646 aa17.16■□□□□ 0.34
BRPF3-201ENST00000339717 HNRNPUL2Q1KMD3 747 aaKnown RBP17.14■□□□□ 0.33
BRPF3-201ENST00000339717 DDRGK1Q96HY6 314 aa17.13■□□□□ 0.33
BRPF3-201ENST00000339717 ITGAEP38570 1179 aa17.12■□□□□ 0.33
BRPF3-201ENST00000339717 HSP90AA2PQ14568 343 aaPredicted RBP17.12■□□□□ 0.33
BRPF3-201ENST00000339717 A0A0U1RQG5 324 aaPredicted RBP17.08■□□□□ 0.32
BRPF3-201ENST00000339717 UBTFP17480 764 aaKnown RBP17.07■□□□□ 0.32
BRPF3-201ENST00000339717 SALL2Q9Y467 1007 aaPredicted RBP17.02■□□□□ 0.32
BRPF3-201ENST00000339717 CNGB1Q14028 1251 aaPredicted RBP17■□□□□ 0.31
BRPF3-201ENST00000339717 PNNQ9H307 717 aaKnown RBP16.98■□□□□ 0.31
BRPF3-201ENST00000339717 L1TD1Q5T7N2 865 aaKnown RBP16.96■□□□□ 0.31
BRPF3-201ENST00000339717 FANCIQ9NVI1 1328 aa16.95■□□□□ 0.3
BRPF3-201ENST00000339717 PDE4CQ08493 712 aa16.94■□□□□ 0.3
BRPF3-201ENST00000339717 USP35Q9P2H5 1018 aa16.93■□□□□ 0.3
BRPF3-201ENST00000339717 ATP1B4Q9UN42 357 aaPredicted RBP16.93■□□□□ 0.3
BRPF3-201ENST00000339717 PTMSP20962 102 aa16.89■□□□□ 0.29
BRPF3-201ENST00000339717 PPP4R2Q9NY27 417 aa16.87■□□□□ 0.29
BRPF3-201ENST00000339717 HNRNPUQ00839 825 aaKnown RBP eCLIP16.87■□□□□ 0.29
BRPF3-201ENST00000339717 LAS1LQ9Y4W2 734 aaKnown RBP16.86■□□□□ 0.29
BRPF3-201ENST00000339717 POLR3GLQ9BT43 218 aa16.85■□□□□ 0.29
BRPF3-201ENST00000339717 ARXQ96QS3 562 aa16.84■□□□□ 0.29
BRPF3-201ENST00000339717 UPF2Q9HAU5 1272 aaKnown RBP16.83■□□□□ 0.29
BRPF3-201ENST00000339717 TIMELESSQ9UNS1 1208 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms