RNA–Protein interactions for RNA: ENST00000441123.1

BRPF3-203, Transcript of bromodomain and PHD finger containing 3, humanhuman

TSL 1 (best)

Gene BRPF3, Length 5,380 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3-203ENST00000441123 NISCHQ9Y2I1 1504 aa22.67■■□□□ 1.22
BRPF3-203ENST00000441123 DCAF8L2P0C7V8 631 aa21.91■■□□□ 1.1
BRPF3-203ENST00000441123 SUPT5HO00267 1087 aaKnown RBP21.24■□□□□ 0.99
BRPF3-203ENST00000441123 SHROOM4Q9ULL8 1493 aa20.98■□□□□ 0.95
BRPF3-203ENST00000441123 APLP2Q06481 763 aa20.08■□□□□ 0.81
BRPF3-203ENST00000441123 PELP1Q8IZL8 1130 aaKnown RBP20.05■□□□□ 0.8
BRPF3-203ENST00000441123 EHMT2Q96KQ7 1210 aa20.03■□□□□ 0.8
BRPF3-203ENST00000441123 ZEB1P37275 1124 aaPredicted RBP20■□□□□ 0.79
BRPF3-203ENST00000441123 PCGF6Q9BYE7 350 aa19.96■□□□□ 0.79
BRPF3-203ENST00000441123 TRIM41Q8WV44 630 aa19.88■□□□□ 0.77
BRPF3-203ENST00000441123 FAM9AQ8IZU1 332 aaPredicted RBP19.86■□□□□ 0.77
BRPF3-203ENST00000441123 CENPBP07199 599 aaPredicted RBP19.6■□□□□ 0.73
BRPF3-203ENST00000441123 CCER1Q8TC90 406 aaPredicted RBP19.54■□□□□ 0.72
BRPF3-203ENST00000441123 TRIM26Q12899 539 aaPredicted RBP19.48■□□□□ 0.71
BRPF3-203ENST00000441123 TTBK1Q5TCY1 1321 aaPredicted RBP19.44■□□□□ 0.7
BRPF3-203ENST00000441123 UBTFP17480 764 aaKnown RBP19.43■□□□□ 0.7
BRPF3-203ENST00000441123 CHIC1Q5VXU3 224 aa19.4■□□□□ 0.7
BRPF3-203ENST00000441123 HRCP23327 699 aa19.36■□□□□ 0.69
BRPF3-203ENST00000441123 RANGAP1P46060 587 aaPredicted RBP19.23■□□□□ 0.67
BRPF3-203ENST00000441123 ATP1B4Q9UN42 357 aaPredicted RBP19.09■□□□□ 0.65
BRPF3-203ENST00000441123 MYT1Q01538 1121 aa19.07■□□□□ 0.64
BRPF3-203ENST00000441123 LOC105371045A0A1W2PR82 267 aa19.05■□□□□ 0.64
BRPF3-203ENST00000441123 NEFLP07196 543 aa18.98■□□□□ 0.63
BRPF3-203ENST00000441123 ERICH6Q7L0X2 663 aa18.97■□□□□ 0.63
BRPF3-203ENST00000441123 PPARGC1BQ86YN6 1023 aaKnown RBP18.95■□□□□ 0.62
BRPF3-203ENST00000441123 ZCCHC6Q5VYS8 1495 aaKnown RBP18.91■□□□□ 0.62
BRPF3-203ENST00000441123 CCDC180Q9P1Z9 1646 aa18.9■□□□□ 0.62
BRPF3-203ENST00000441123 YTHDC1Q96MU7 727 aaKnown RBP18.86■□□□□ 0.61
BRPF3-203ENST00000441123 ABCC9O60706 1549 aa18.79■□□□□ 0.6
BRPF3-203ENST00000441123 HNRNPUL2Q1KMD3 747 aaKnown RBP18.69■□□□□ 0.58
BRPF3-203ENST00000441123 DIEXFQ68CQ4 756 aaKnown RBP18.6■□□□□ 0.57
BRPF3-203ENST00000441123 ITGAEP38570 1179 aa18.6■□□□□ 0.57
BRPF3-203ENST00000441123 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.59■□□□□ 0.57
BRPF3-203ENST00000441123 DCAF1Q9Y4B6 1507 aa18.58■□□□□ 0.57
BRPF3-203ENST00000441123 SCRIBQ14160 1630 aa18.49■□□□□ 0.55
BRPF3-203ENST00000441123 PABPN1Q86U42 306 aaKnown RBP eCLIP18.45■□□□□ 0.54
BRPF3-203ENST00000441123 CSRNP3Q8WYN3 585 aa18.38■□□□□ 0.53
BRPF3-203ENST00000441123 MYT1LQ9UL68 1186 aa18.37■□□□□ 0.53
BRPF3-203ENST00000441123 FAM50AQ14320 339 aaKnown RBP18.34■□□□□ 0.53
BRPF3-203ENST00000441123 ZNF316A6NFI3 1004 aaPredicted RBP18.31■□□□□ 0.52
BRPF3-203ENST00000441123 POLR3GLQ9BT43 218 aa18.25■□□□□ 0.51
BRPF3-203ENST00000441123 DAXXQ9UER7 740 aaPredicted RBP18.22■□□□□ 0.51
BRPF3-203ENST00000441123 TRIM52Q96A61 297 aa18.16■□□□□ 0.5
BRPF3-203ENST00000441123 ANP32CO43423 234 aa18.15■□□□□ 0.5
BRPF3-203ENST00000441123 RB1CC1Q8TDY2 1594 aa18.15■□□□□ 0.5
BRPF3-203ENST00000441123 GTF3C3Q9Y5Q9 886 aa18.14■□□□□ 0.49
BRPF3-203ENST00000441123 NEUROD1Q13562 356 aa18.13■□□□□ 0.49
BRPF3-203ENST00000441123 NACADO15069 1562 aa18.12■□□□□ 0.49
BRPF3-203ENST00000441123 CLSPNQ9HAW4 1339 aa18.11■□□□□ 0.49
BRPF3-203ENST00000441123 ACIN1Q9UKV3 1341 aaKnown RBP18.11■□□□□ 0.49
BRPF3-203ENST00000441123 EEA1Q15075 1411 aa18.09■□□□□ 0.49
BRPF3-203ENST00000441123 RSF1Q96T23 1441 aaPredicted RBP18.07■□□□□ 0.48
BRPF3-203ENST00000441123 MYO15BQ96JP2 1530 aa18.01■□□□□ 0.47
BRPF3-203ENST00000441123 RTL5Q5HYW3 569 aaPredicted RBP17.94■□□□□ 0.46
BRPF3-203ENST00000441123 GOLGA3Q08378 1498 aa17.93■□□□□ 0.46
BRPF3-203ENST00000441123 CNGB1Q14028 1251 aaPredicted RBP17.92■□□□□ 0.46
BRPF3-203ENST00000441123 CDK11AQ9UQ88 783 aaPredicted RBP17.91■□□□□ 0.46
BRPF3-203ENST00000441123 SLC4A1APQ9BWU0 796 aaKnown RBP17.89■□□□□ 0.45
BRPF3-203ENST00000441123 CLIP1P30622 1438 aa17.87■□□□□ 0.45
BRPF3-203ENST00000441123 P3H3Q8IVL6 736 aa17.85■□□□□ 0.45
BRPF3-203ENST00000441123 BAZ1AQ9NRL2 1556 aaPredicted RBP17.84■□□□□ 0.45
BRPF3-203ENST00000441123 TONSLQ96HA7 1378 aa17.83■□□□□ 0.44
BRPF3-203ENST00000441123 CEP162Q5TB80 1403 aa17.82■□□□□ 0.44
BRPF3-203ENST00000441123 TNIKQ9UKE5 1360 aa17.8■□□□□ 0.44
BRPF3-203ENST00000441123 BCANQ96GW7 911 aa17.8■□□□□ 0.44
BRPF3-203ENST00000441123 ZNF326Q5BKZ1 582 aaKnown RBP17.79■□□□□ 0.44
BRPF3-203ENST00000441123 WRNQ14191 1432 aaPredicted RBP eCLIP17.77■□□□□ 0.44
BRPF3-203ENST00000441123 CEP164Q9UPV0 1460 aa17.77■□□□□ 0.43
BRPF3-203ENST00000441123 FBLN2P98095 1184 aa17.73■□□□□ 0.43
BRPF3-203ENST00000441123 BAZ1BQ9UIG0 1483 aaKnown RBP17.72■□□□□ 0.43
BRPF3-203ENST00000441123 KIF27Q86VH2 1401 aa17.63■□□□□ 0.41
BRPF3-203ENST00000441123 MTUS2Q5JR59 1369 aa17.62■□□□□ 0.41
BRPF3-203ENST00000441123 ZNF777Q9ULD5 760 aaPredicted RBP17.61■□□□□ 0.41
BRPF3-203ENST00000441123 ANP32AP39687 249 aaKnown RBP17.58■□□□□ 0.41
BRPF3-203ENST00000441123 DDX10Q13206 875 aaKnown RBP17.57■□□□□ 0.4
BRPF3-203ENST00000441123 FKBP8Q14318 412 aa17.57■□□□□ 0.4
BRPF3-203ENST00000441123 ARID3CA6NKF2 412 aa17.56■□□□□ 0.4
BRPF3-203ENST00000441123 CECR2Q9BXF3 1484 aa17.54■□□□□ 0.4
BRPF3-203ENST00000441123 CANXP27824 592 aaKnown RBP17.54■□□□□ 0.4
BRPF3-203ENST00000441123 HNRNPUQ00839 825 aaKnown RBP eCLIP17.52■□□□□ 0.39
BRPF3-203ENST00000441123 ZBTB47Q9UFB7 747 aaPredicted RBP17.52■□□□□ 0.39
BRPF3-203ENST00000441123 NEFMP07197 916 aa17.51■□□□□ 0.39
BRPF3-203ENST00000441123 MIER1Q8N108 512 aa17.5■□□□□ 0.39
BRPF3-203ENST00000441123 SCAF1Q9H7N4 1312 aaKnown RBP17.49■□□□□ 0.39
BRPF3-203ENST00000441123 MROH2BQ7Z745 1585 aa17.46■□□□□ 0.38
BRPF3-203ENST00000441123 CHIC2Q9UKJ5 165 aa17.42■□□□□ 0.38
BRPF3-203ENST00000441123 FHAD1B1AJZ9 1412 aa17.42■□□□□ 0.38
BRPF3-203ENST00000441123 TSPY4P0CV99 314 aa17.41■□□□□ 0.38
BRPF3-203ENST00000441123 TSPY10P0CW01 314 aa17.41■□□□□ 0.38
BRPF3-203ENST00000441123 EIF4G2P78344 907 aaKnown RBP eCLIP17.41■□□□□ 0.38
BRPF3-203ENST00000441123 TOP2AP11388 1531 aaKnown RBP17.41■□□□□ 0.38
BRPF3-203ENST00000441123 CCDC88BA6NC98 1476 aa17.4■□□□□ 0.38
BRPF3-203ENST00000441123 SMARCA2P51531 1590 aa17.4■□□□□ 0.38
BRPF3-203ENST00000441123 FAM9BQ8IZU0 186 aa17.4■□□□□ 0.38
BRPF3-203ENST00000441123 TMC1Q8TDI8 760 aa17.37■□□□□ 0.37
BRPF3-203ENST00000441123 VPS8Q8N3P4 1428 aa17.37■□□□□ 0.37
BRPF3-203ENST00000441123 SOGA1O94964 1423 aa17.36■□□□□ 0.37
BRPF3-203ENST00000441123 MRS2Q9HD23 443 aa17.35■□□□□ 0.37
BRPF3-203ENST00000441123 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.34■□□□□ 0.37
BRPF3-203ENST00000441123 TIMELESSQ9UNS1 1208 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms