RNA–Protein interactions for RNA: ENST00000368930.5

CDC40-202, Transcript of cell division cycle 40, humanhuman

TSL 2 BASIC

Gene CDC40, Length 1,977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC40-202ENST00000368930 NISCHQ9Y2I1 1504 aa23.51■■□□□ 1.35
CDC40-202ENST00000368930 CCDC180Q9P1Z9 1646 aa20.11■□□□□ 0.81
CDC40-202ENST00000368930 ZCCHC6Q5VYS8 1495 aaKnown RBP19.87■□□□□ 0.77
CDC40-202ENST00000368930 SHROOM4Q9ULL8 1493 aa19.77■□□□□ 0.76
CDC40-202ENST00000368930 DCAF1Q9Y4B6 1507 aa19.37■□□□□ 0.69
CDC40-202ENST00000368930 SUPT5HO00267 1087 aaKnown RBP19.35■□□□□ 0.69
CDC40-202ENST00000368930 DCAF8L2P0C7V8 631 aa19.33■□□□□ 0.68
CDC40-202ENST00000368930 MYO15BQ96JP2 1530 aa18.87■□□□□ 0.61
CDC40-202ENST00000368930 CHIC1Q5VXU3 224 aa18.86■□□□□ 0.61
CDC40-202ENST00000368930 ABCC9O60706 1549 aa18.72■□□□□ 0.59
CDC40-202ENST00000368930 SCRIBQ14160 1630 aa18.7■□□□□ 0.58
CDC40-202ENST00000368930 NACADO15069 1562 aa18.59■□□□□ 0.57
CDC40-202ENST00000368930 RSF1Q96T23 1441 aaPredicted RBP18.54■□□□□ 0.56
CDC40-202ENST00000368930 RB1CC1Q8TDY2 1594 aa18.34■□□□□ 0.53
CDC40-202ENST00000368930 CECR2Q9BXF3 1484 aa18.29■□□□□ 0.52
CDC40-202ENST00000368930 MROH2BQ7Z745 1585 aa18.23■□□□□ 0.51
CDC40-202ENST00000368930 LOC105371045A0A1W2PR82 267 aa18.22■□□□□ 0.51
CDC40-202ENST00000368930 AEBP2Q6ZN18 517 aaPredicted RBP18.22■□□□□ 0.51
CDC40-202ENST00000368930 WIZO95785 1651 aa18.13■□□□□ 0.49
CDC40-202ENST00000368930 TRIM41Q8WV44 630 aa18.1■□□□□ 0.49
CDC40-202ENST00000368930 PCGF6Q9BYE7 350 aa18.08■□□□□ 0.49
CDC40-202ENST00000368930 HRCP23327 699 aa18.07■□□□□ 0.48
CDC40-202ENST00000368930 BAZ1AQ9NRL2 1556 aaPredicted RBP18.07■□□□□ 0.48
CDC40-202ENST00000368930 UNC13AQ9UPW8 1703 aa18.03■□□□□ 0.48
CDC40-202ENST00000368930 SMARCA4P51532 1647 aa17.93■□□□□ 0.46
CDC40-202ENST00000368930 EIF4G1Q04637 1599 aaKnown RBP17.89■□□□□ 0.46
CDC40-202ENST00000368930 TOP2AP11388 1531 aaKnown RBP17.89■□□□□ 0.45
CDC40-202ENST00000368930 FAM9AQ8IZU1 332 aaPredicted RBP17.86■□□□□ 0.45
CDC40-202ENST00000368930 TRIM26Q12899 539 aaPredicted RBP17.85■□□□□ 0.45
CDC40-202ENST00000368930 BICRAQ9NZM4 1560 aa17.79■□□□□ 0.44
CDC40-202ENST00000368930 SMARCA2P51531 1590 aa17.77■□□□□ 0.44
CDC40-202ENST00000368930 CCDC88BA6NC98 1476 aa17.77■□□□□ 0.44
CDC40-202ENST00000368930 PABPN1Q86U42 306 aaKnown RBP eCLIP17.69■□□□□ 0.42
CDC40-202ENST00000368930 PEG3Q9GZU2 1588 aa17.65■□□□□ 0.42
CDC40-202ENST00000368930 ABCC8Q09428 1581 aa17.64■□□□□ 0.41
CDC40-202ENST00000368930 EHMT2Q96KQ7 1210 aa17.63■□□□□ 0.41
CDC40-202ENST00000368930 PPARGC1BQ86YN6 1023 aaKnown RBP17.62■□□□□ 0.41
CDC40-202ENST00000368930 ATAD2BQ9ULI0 1458 aa17.48■□□□□ 0.39
CDC40-202ENST00000368930 SOGA1O94964 1423 aa17.46■□□□□ 0.39
CDC40-202ENST00000368930 EEA1Q15075 1411 aa17.44■□□□□ 0.38
CDC40-202ENST00000368930 ZEB1P37275 1124 aaPredicted RBP17.44■□□□□ 0.38
CDC40-202ENST00000368930 BAZ1BQ9UIG0 1483 aaKnown RBP17.41■□□□□ 0.38
CDC40-202ENST00000368930 WRNQ14191 1432 aaPredicted RBP eCLIP17.4■□□□□ 0.38
CDC40-202ENST00000368930 RUSC2Q8N2Y8 1516 aa17.38■□□□□ 0.37
CDC40-202ENST00000368930 CSRNP3Q8WYN3 585 aa17.38■□□□□ 0.37
CDC40-202ENST00000368930 TNIKQ9UKE5 1360 aa17.37■□□□□ 0.37
CDC40-202ENST00000368930 CEP162Q5TB80 1403 aa17.34■□□□□ 0.37
CDC40-202ENST00000368930 SYNJ1O43426 1573 aa17.32■□□□□ 0.36
CDC40-202ENST00000368930 GOLGA3Q08378 1498 aa17.27■□□□□ 0.36
CDC40-202ENST00000368930 UBTFP17480 764 aaKnown RBP17.24■□□□□ 0.35
CDC40-202ENST00000368930 KIF21BO75037 1637 aa17.21■□□□□ 0.35
CDC40-202ENST00000368930 NCAPD3P42695 1498 aa17.19■□□□□ 0.34
CDC40-202ENST00000368930 CEP164Q9UPV0 1460 aa17.19■□□□□ 0.34
CDC40-202ENST00000368930 HMGXB3Q12766 1538 aa17.19■□□□□ 0.34
CDC40-202ENST00000368930 TOP2BQ02880 1626 aa17.17■□□□□ 0.34
CDC40-202ENST00000368930 BIVM-ERCC5R4GMW8 1640 aa17.13■□□□□ 0.33
CDC40-202ENST00000368930 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.08■□□□□ 0.33
CDC40-202ENST00000368930 RAPGEF2Q9Y4G8 1499 aa17.05■□□□□ 0.32
CDC40-202ENST00000368930 CLIP1P30622 1438 aa17.05■□□□□ 0.32
CDC40-202ENST00000368930 CCER1Q8TC90 406 aaPredicted RBP17.05■□□□□ 0.32
CDC40-202ENST00000368930 TTBK1Q5TCY1 1321 aaPredicted RBP17.04■□□□□ 0.32
CDC40-202ENST00000368930 CFTRP13569 1480 aa17.01■□□□□ 0.31
CDC40-202ENST00000368930 CUX1P39880 1505 aa16.99■□□□□ 0.31
CDC40-202ENST00000368930 VPS8Q8N3P4 1428 aa16.98■□□□□ 0.31
CDC40-202ENST00000368930 ERICH3Q5RHP9 1530 aa16.96■□□□□ 0.31
CDC40-202ENST00000368930 PRXQ9BXM0 1461 aa16.96■□□□□ 0.31
CDC40-202ENST00000368930 PRDM2Q13029 1718 aa16.92■□□□□ 0.3
CDC40-202ENST00000368930 KIF27Q86VH2 1401 aa16.88■□□□□ 0.29
CDC40-202ENST00000368930 APLP2Q06481 763 aa16.84■□□□□ 0.29
CDC40-202ENST00000368930 RANGAP1P46060 587 aaPredicted RBP16.82■□□□□ 0.28
CDC40-202ENST00000368930 CADPSQ9ULU8 1353 aa16.82■□□□□ 0.28
CDC40-202ENST00000368930 ARAP1Q96P48 1450 aa16.8■□□□□ 0.28
CDC40-202ENST00000368930 CC2D2AQ9P2K1 1620 aa16.78■□□□□ 0.28
CDC40-202ENST00000368930 HNRNPUL2Q1KMD3 747 aaKnown RBP16.76■□□□□ 0.27
CDC40-202ENST00000368930 IGF1RP08069 1367 aa16.71■□□□□ 0.27
CDC40-202ENST00000368930 CUX2O14529 1486 aa16.71■□□□□ 0.27
CDC40-202ENST00000368930 FGD5Q6ZNL6 1462 aa16.69■□□□□ 0.26
CDC40-202ENST00000368930 ARHGAP35Q9NRY4 1499 aa16.69■□□□□ 0.26
CDC40-202ENST00000368930 DIEXFQ68CQ4 756 aaKnown RBP16.66■□□□□ 0.26
CDC40-202ENST00000368930 KANK4Q5T7N3 995 aaPredicted RBP16.66■□□□□ 0.26
CDC40-202ENST00000368930 FANCD2Q9BXW9 1451 aa16.64■□□□□ 0.25
CDC40-202ENST00000368930 CARMIL1Q5VZK9 1371 aa16.62■□□□□ 0.25
CDC40-202ENST00000368930 ZNF316A6NFI3 1004 aaPredicted RBP16.6■□□□□ 0.25
CDC40-202ENST00000368930 RRBP1Q9P2E9 1410 aaKnown RBP16.59■□□□□ 0.25
CDC40-202ENST00000368930 DNMBPQ6XZF7 1577 aa16.58■□□□□ 0.25
CDC40-202ENST00000368930 MAP3K1Q13233 1512 aa16.54■□□□□ 0.24
CDC40-202ENST00000368930 TOPBP1Q92547 1522 aa16.54■□□□□ 0.24
CDC40-202ENST00000368930 ABCA10Q8WWZ4 1543 aa16.53■□□□□ 0.24
CDC40-202ENST00000368930 CLSPNQ9HAW4 1339 aa16.53■□□□□ 0.24
CDC40-202ENST00000368930 SCAF1Q9H7N4 1312 aaKnown RBP16.52■□□□□ 0.24
CDC40-202ENST00000368930 NESP48681 1621 aa16.52■□□□□ 0.24
CDC40-202ENST00000368930 POLA1P09884 1462 aaPredicted RBP16.51■□□□□ 0.23
CDC40-202ENST00000368930 RAD54L2Q9Y4B4 1467 aa16.51■□□□□ 0.23
CDC40-202ENST00000368930 TIAM1Q13009 1591 aa16.5■□□□□ 0.23
CDC40-202ENST00000368930 DHX57Q6P158 1386 aaKnown RBP16.5■□□□□ 0.23
CDC40-202ENST00000368930 CCNB3Q8WWL7 1395 aa16.5■□□□□ 0.23
CDC40-202ENST00000368930 LAMC3Q9Y6N6 1575 aa16.47■□□□□ 0.23
CDC40-202ENST00000368930 ACIN1Q9UKV3 1341 aaKnown RBP16.45■□□□□ 0.22
CDC40-202ENST00000368930 CUL7Q14999 1698 aa16.45■□□□□ 0.22
CDC40-202ENST00000368930 FHAD1B1AJZ9 1412 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms