Protein–RNA interactions for Protein: Q9UHC7

MKRN1, E3 ubiquitin-protein ligase makorin-1, humanhuman

Known RBP Predictions only

Length 482 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKRN1Q9UHC7 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC33.45■■■□□ 2.95
MKRN1Q9UHC7 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC33.45■■■□□ 2.95
MKRN1Q9UHC7 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC33.45■■■□□ 2.95
MKRN1Q9UHC7 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC33.44■■■□□ 2.94
MKRN1Q9UHC7 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC33.43■■■□□ 2.94
MKRN1Q9UHC7 BOD1-206ENST00000480951 814 ntTSL 2 BASIC33.43■■■□□ 2.94
MKRN1Q9UHC7 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC33.4■■■□□ 2.94
MKRN1Q9UHC7 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC33.38■■■□□ 2.93
MKRN1Q9UHC7 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC33.37■■■□□ 2.93
MKRN1Q9UHC7 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC33.36■■■□□ 2.93
MKRN1Q9UHC7 HGH1-207ENST00000628266 258 ntTSL 5 BASIC33.36■■■□□ 2.93
MKRN1Q9UHC7 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC33.36■■■□□ 2.93
MKRN1Q9UHC7 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC33.35■■■□□ 2.93
MKRN1Q9UHC7 HSD17B1P1-201ENST00000590052 955 ntBASIC33.34■■■□□ 2.93
MKRN1Q9UHC7 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC33.33■■■□□ 2.93
MKRN1Q9UHC7 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC33.32■■■□□ 2.92
MKRN1Q9UHC7 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC33.31■■■□□ 2.92
MKRN1Q9UHC7 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC33.3■■■□□ 2.92
MKRN1Q9UHC7 BRD4-212ENST00000630599 726 ntTSL 2 BASIC33.29■■■□□ 2.92
MKRN1Q9UHC7 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC33.28■■■□□ 2.92
MKRN1Q9UHC7 MIR639-201ENST00000384974 98 ntBASIC33.28■■■□□ 2.92
MKRN1Q9UHC7 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC33.27■■■□□ 2.92
MKRN1Q9UHC7 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC33.26■■■□□ 2.92
MKRN1Q9UHC7 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC33.25■■■□□ 2.91
MKRN1Q9UHC7 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC33.25■■■□□ 2.91
MKRN1Q9UHC7 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC33.25■■■□□ 2.91
MKRN1Q9UHC7 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC33.24■■■□□ 2.91
MKRN1Q9UHC7 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC33.22■■■□□ 2.91
MKRN1Q9UHC7 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC33.22■■■□□ 2.91
MKRN1Q9UHC7 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC33.21■■■□□ 2.91
MKRN1Q9UHC7 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC33.21■■■□□ 2.91
MKRN1Q9UHC7 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC33.2■■■□□ 2.91
MKRN1Q9UHC7 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC33.2■■■□□ 2.91
MKRN1Q9UHC7 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC33.2■■■□□ 2.91
MKRN1Q9UHC7 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC33.2■■■□□ 2.91
MKRN1Q9UHC7 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC33.2■■■□□ 2.91
MKRN1Q9UHC7 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC33.18■■■□□ 2.9
MKRN1Q9UHC7 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC33.18■■■□□ 2.9
MKRN1Q9UHC7 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC33.17■■■□□ 2.9
MKRN1Q9UHC7 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC33.17■■■□□ 2.9
MKRN1Q9UHC7 CALM3-209ENST00000597743 577 ntTSL 4 BASIC33.17■■■□□ 2.9
MKRN1Q9UHC7 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC33.16■■■□□ 2.9
MKRN1Q9UHC7 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC33.15■■■□□ 2.9
MKRN1Q9UHC7 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC33.14■■■□□ 2.9
MKRN1Q9UHC7 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC33.14■■■□□ 2.9
MKRN1Q9UHC7 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC33.07■■■□□ 2.88
MKRN1Q9UHC7 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC33.06■■■□□ 2.88
MKRN1Q9UHC7 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC33.06■■■□□ 2.88
MKRN1Q9UHC7 MACF1-219ENST00000484793 834 ntTSL 2 BASIC33.05■■■□□ 2.88
MKRN1Q9UHC7 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC33.03■■■□□ 2.88
MKRN1Q9UHC7 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC33.03■■■□□ 2.88
MKRN1Q9UHC7 DUX4L29-201ENST00000425409 679 ntBASIC33.03■■■□□ 2.88
MKRN1Q9UHC7 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC33.02■■■□□ 2.88
MKRN1Q9UHC7 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC33■■■□□ 2.87
MKRN1Q9UHC7 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC33■■■□□ 2.87
MKRN1Q9UHC7 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC33■■■□□ 2.87
MKRN1Q9UHC7 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC32.99■■■□□ 2.87
MKRN1Q9UHC7 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC32.99■■■□□ 2.87
MKRN1Q9UHC7 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC32.98■■■□□ 2.87
MKRN1Q9UHC7 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC32.97■■■□□ 2.87
MKRN1Q9UHC7 AC016575.1-201ENST00000607026 382 ntBASIC32.97■■■□□ 2.87
MKRN1Q9UHC7 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC32.96■■■□□ 2.87
MKRN1Q9UHC7 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC32.95■■■□□ 2.87
MKRN1Q9UHC7 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC32.95■■■□□ 2.87
MKRN1Q9UHC7 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC32.95■■■□□ 2.87
MKRN1Q9UHC7 ABHD17AP3-201ENST00000503096 1137 ntBASIC32.93■■■□□ 2.86
MKRN1Q9UHC7 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC32.91■■■□□ 2.86
MKRN1Q9UHC7 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC32.9■■■□□ 2.86
MKRN1Q9UHC7 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC32.89■■■□□ 2.86
MKRN1Q9UHC7 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC32.89■■■□□ 2.86
MKRN1Q9UHC7 RNF166-209ENST00000567844 633 ntTSL 5 BASIC32.89■■■□□ 2.86
MKRN1Q9UHC7 MIR3648-2-201ENST00000581792 180 ntBASIC32.89■■■□□ 2.86
MKRN1Q9UHC7 MIR3648-1-201ENST00000615959 180 ntBASIC32.89■■■□□ 2.86
MKRN1Q9UHC7 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC32.88■■■□□ 2.85
MKRN1Q9UHC7 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC32.88■■■□□ 2.85
MKRN1Q9UHC7 GDI1-215ENST00000630693 786 ntTSL 4 BASIC32.88■■■□□ 2.85
MKRN1Q9UHC7 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC32.87■■■□□ 2.85
MKRN1Q9UHC7 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC32.85■■■□□ 2.85
MKRN1Q9UHC7 DENR-202ENST00000455982 1052 ntTSL 5 BASIC32.85■■■□□ 2.85
MKRN1Q9UHC7 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC32.84■■■□□ 2.85
MKRN1Q9UHC7 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC32.84■■■□□ 2.85
MKRN1Q9UHC7 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC32.84■■■□□ 2.85
MKRN1Q9UHC7 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC32.84■■■□□ 2.85
MKRN1Q9UHC7 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC32.84■■■□□ 2.85
MKRN1Q9UHC7 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC32.83■■■□□ 2.85
MKRN1Q9UHC7 AC021231.2-201ENST00000594613 730 ntBASIC32.82■■■□□ 2.84
MKRN1Q9UHC7 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC32.81■■■□□ 2.84
MKRN1Q9UHC7 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC32.8■■■□□ 2.84
MKRN1Q9UHC7 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC32.79■■■□□ 2.84
MKRN1Q9UHC7 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC32.78■■■□□ 2.84
MKRN1Q9UHC7 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC32.77■■■□□ 2.84
MKRN1Q9UHC7 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC32.77■■■□□ 2.84
MKRN1Q9UHC7 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC32.76■■■□□ 2.83
MKRN1Q9UHC7 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC32.76■■■□□ 2.83
MKRN1Q9UHC7 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC32.75■■■□□ 2.83
MKRN1Q9UHC7 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC32.75■■■□□ 2.83
MKRN1Q9UHC7 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC32.75■■■□□ 2.83
MKRN1Q9UHC7 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC32.75■■■□□ 2.83
MKRN1Q9UHC7 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC32.75■■■□□ 2.83
MKRN1Q9UHC7 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC32.75■■■□□ 2.83
Retrieved 100 of 98,524 protein–RNA pairs in 9.7 ms