RNA–Protein interactions for RNA: ENST00000317702.9

TUBB6-201, Transcript of tubulin beta 6 class V, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB6, Length 2,064 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB6-201ENST00000317702 NISCHQ9Y2I1 1504 aa62.51■■■■■ 7.6
TUBB6-201ENST00000317702 CCDC180Q9P1Z9 1646 aa54.04■■■■■ 6.24
TUBB6-201ENST00000317702 ZCCHC6Q5VYS8 1495 aaKnown RBP52.66■■■■■ 6.02
TUBB6-201ENST00000317702 SHROOM4Q9ULL8 1493 aa51.74■■■■■ 5.87
TUBB6-201ENST00000317702 DCAF8L2P0C7V8 631 aa51.57■■■■■ 5.85
TUBB6-201ENST00000317702 DCAF1Q9Y4B6 1507 aa51.55■■■■■ 5.84
TUBB6-201ENST00000317702 ABCC9O60706 1549 aa50.73■■■■■ 5.71
TUBB6-201ENST00000317702 MYO15BQ96JP2 1530 aa50.63■■■■■ 5.7
TUBB6-201ENST00000317702 NACADO15069 1562 aa50.19■■■■■ 5.63
TUBB6-201ENST00000317702 SUPT5HO00267 1087 aaKnown RBP50.08■■■■■ 5.61
TUBB6-201ENST00000317702 SCRIBQ14160 1630 aa50.02■■■■■ 5.6
TUBB6-201ENST00000317702 RB1CC1Q8TDY2 1594 aa49.61■■■■■ 5.53
TUBB6-201ENST00000317702 RSF1Q96T23 1441 aaPredicted RBP48.83■■■■■ 5.41
TUBB6-201ENST00000317702 UNC13AQ9UPW8 1703 aa48.74■■■■■ 5.39
TUBB6-201ENST00000317702 CECR2Q9BXF3 1484 aa48.65■■■■■ 5.38
TUBB6-201ENST00000317702 MROH2BQ7Z745 1585 aa48.41■■■■■ 5.34
TUBB6-201ENST00000317702 CHIC1Q5VXU3 224 aa48.25■■■■■ 5.32
TUBB6-201ENST00000317702 BICRAQ9NZM4 1560 aa48.24■■■■■ 5.31
TUBB6-201ENST00000317702 BAZ1AQ9NRL2 1556 aaPredicted RBP48.16■■■■■ 5.3
TUBB6-201ENST00000317702 WIZO95785 1651 aa48.06■■■■■ 5.28
TUBB6-201ENST00000317702 PABPN1Q86U42 306 aaKnown RBP eCLIP48.05■■■■■ 5.28
TUBB6-201ENST00000317702 SMARCA4P51532 1647 aa47.9■■■■■ 5.26
TUBB6-201ENST00000317702 TOP2AP11388 1531 aaKnown RBP47.48■■■■■ 5.19
TUBB6-201ENST00000317702 PEG3Q9GZU2 1588 aa47.21■■■■■ 5.15
TUBB6-201ENST00000317702 SMARCA2P51531 1590 aa47.11■■■■■ 5.13
TUBB6-201ENST00000317702 CCDC88BA6NC98 1476 aa47.09■■■■■ 5.13
TUBB6-201ENST00000317702 EIF4G1Q04637 1599 aaKnown RBP47.03■■■■■ 5.12
TUBB6-201ENST00000317702 ATAD2BQ9ULI0 1458 aa46.96■■■■■ 5.11
TUBB6-201ENST00000317702 TRIM41Q8WV44 630 aa46.92■■■■■ 5.1
TUBB6-201ENST00000317702 BAZ1BQ9UIG0 1483 aaKnown RBP46.72■■■■■ 5.07
TUBB6-201ENST00000317702 LOC105371045A0A1W2PR82 267 aa46.55■■■■■ 5.04
TUBB6-201ENST00000317702 ABCC8Q09428 1581 aa46.39■■■■■ 5.02
TUBB6-201ENST00000317702 NCAPD3P42695 1498 aa46.37■■■■■ 5.01
TUBB6-201ENST00000317702 HMGXB3Q12766 1538 aa46.34■■■■■ 5.01
TUBB6-201ENST00000317702 FAM9AQ8IZU1 332 aaPredicted RBP46.24■■■■■ 4.99
TUBB6-201ENST00000317702 WRNQ14191 1432 aaPredicted RBP eCLIP45.9■■■■■ 4.94
TUBB6-201ENST00000317702 PCGF6Q9BYE7 350 aa45.87■■■■■ 4.93
TUBB6-201ENST00000317702 CC2D2AQ9P2K1 1620 aa45.84■■■■■ 4.93
TUBB6-201ENST00000317702 SYNJ1O43426 1573 aa45.75■■■■■ 4.91
TUBB6-201ENST00000317702 EHMT2Q96KQ7 1210 aa45.67■■■■■ 4.9
TUBB6-201ENST00000317702 SOGA1O94964 1423 aa45.67■■■■■ 4.9
TUBB6-201ENST00000317702 HRCP23327 699 aa45.59■■■■■ 4.89
TUBB6-201ENST00000317702 CFTRP13569 1480 aa45.57■■■■■ 4.89
TUBB6-201ENST00000317702 RUSC2Q8N2Y8 1516 aa45.5■■■■■ 4.87
TUBB6-201ENST00000317702 EEA1Q15075 1411 aa45.49■■■■■ 4.87
TUBB6-201ENST00000317702 TOP2BQ02880 1626 aa45.41■■■■■ 4.86
TUBB6-201ENST00000317702 TRIM26Q12899 539 aaPredicted RBP45.37■■■■■ 4.85
TUBB6-201ENST00000317702 BIVM-ERCC5R4GMW8 1640 aa45.34■■■■■ 4.85
TUBB6-201ENST00000317702 CSRNP3Q8WYN3 585 aa45.31■■■■■ 4.84
TUBB6-201ENST00000317702 PRDM2Q13029 1718 aa45.28■■■■■ 4.84
TUBB6-201ENST00000317702 CADPSQ9ULU8 1353 aa45.27■■■■■ 4.84
TUBB6-201ENST00000317702 CUX1P39880 1505 aa45.2■■■■■ 4.83
TUBB6-201ENST00000317702 DNAJC5BQ9UF47 199 aa45.16■■■■■ 4.82
TUBB6-201ENST00000317702 GOLGA3Q08378 1498 aa45■■■■■ 4.79
TUBB6-201ENST00000317702 TNIKQ9UKE5 1360 aa44.99■■■■■ 4.79
TUBB6-201ENST00000317702 KIF21BO75037 1637 aa44.94■■■■■ 4.78
TUBB6-201ENST00000317702 CEP164Q9UPV0 1460 aa44.91■■■■■ 4.78
TUBB6-201ENST00000317702 CEP162Q5TB80 1403 aa44.87■■■■■ 4.77
TUBB6-201ENST00000317702 UBTFP17480 764 aaKnown RBP44.83■■■■■ 4.77
TUBB6-201ENST00000317702 FANCD2Q9BXW9 1451 aa44.81■■■■■ 4.76
TUBB6-201ENST00000317702 NESP48681 1621 aa44.79■■■■■ 4.76
TUBB6-201ENST00000317702 RAPGEF2Q9Y4G8 1499 aa44.68■■■■■ 4.74
TUBB6-201ENST00000317702 LAMC3Q9Y6N6 1575 aa44.64■■■■■ 4.74
TUBB6-201ENST00000317702 KIF27Q86VH2 1401 aa44.63■■■■■ 4.74
TUBB6-201ENST00000317702 FGD5Q6ZNL6 1462 aa44.58■■■■■ 4.73
TUBB6-201ENST00000317702 PRXQ9BXM0 1461 aa44.55■■■■■ 4.72
TUBB6-201ENST00000317702 DNMBPQ6XZF7 1577 aa44.48■■■■■ 4.71
TUBB6-201ENST00000317702 ERICH3Q5RHP9 1530 aa44.48■■■■■ 4.71
TUBB6-201ENST00000317702 PPARGC1BQ86YN6 1023 aaKnown RBP44.48■■■■■ 4.71
TUBB6-201ENST00000317702 CUX2O14529 1486 aa44.44■■■■■ 4.7
TUBB6-201ENST00000317702 TOPBP1Q92547 1522 aa44.41■■■■■ 4.7
TUBB6-201ENST00000317702 CLIP1P30622 1438 aa44.34■■■■■ 4.69
TUBB6-201ENST00000317702 PDS5BQ9NTI5 1447 aa44.3■■■■■ 4.68
TUBB6-201ENST00000317702 POLA1P09884 1462 aaPredicted RBP44.26■■■■■ 4.68
TUBB6-201ENST00000317702 URB2Q14146 1524 aaKnown RBP44.26■■■■■ 4.68
TUBB6-201ENST00000317702 IGF1RP08069 1367 aa44.24■■■■■ 4.67
TUBB6-201ENST00000317702 RAD54L2Q9Y4B4 1467 aa44.2■■■■■ 4.67
TUBB6-201ENST00000317702 ZEB1P37275 1124 aaPredicted RBP44.2■■■■■ 4.67
TUBB6-201ENST00000317702 KIF21AQ7Z4S6 1674 aa44.16■■■■■ 4.66
TUBB6-201ENST00000317702 ABCA10Q8WWZ4 1543 aa44.14■■■■■ 4.66
TUBB6-201ENST00000317702 RANGAP1P46060 587 aaPredicted RBP44.05■■■■■ 4.64
TUBB6-201ENST00000317702 VPS8Q8N3P4 1428 aa44.03■■■■■ 4.64
TUBB6-201ENST00000317702 CARMIL1Q5VZK9 1371 aa44■■■■■ 4.63
TUBB6-201ENST00000317702 WDR97A6NE52 1622 aa43.94■■■■■ 4.62
TUBB6-201ENST00000317702 TTBK1Q5TCY1 1321 aaPredicted RBP43.88■■■■■ 4.62
TUBB6-201ENST00000317702 ARAP1Q96P48 1450 aa43.87■■■■■ 4.61
TUBB6-201ENST00000317702 ABCA5Q8WWZ7 1642 aa43.74■■■■■ 4.59
TUBB6-201ENST00000317702 MRC2Q9UBG0 1479 aa43.73■■■■■ 4.59
TUBB6-201ENST00000317702 CUL7Q14999 1698 aa43.71■■■■■ 4.59
TUBB6-201ENST00000317702 ARHGAP35Q9NRY4 1499 aa43.71■■■■■ 4.59
TUBB6-201ENST00000317702 TDRD9Q8NDG6 1382 aaKnown RBP43.7■■■■■ 4.59
TUBB6-201ENST00000317702 TARBP1Q13395 1621 aaKnown RBP43.67■■■■■ 4.58
TUBB6-201ENST00000317702 GAPVD1Q14C86 1478 aa43.62■■■■■ 4.57
TUBB6-201ENST00000317702 APLP2Q06481 763 aa43.56■■■■■ 4.56
TUBB6-201ENST00000317702 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP43.49■■■■■ 4.55
TUBB6-201ENST00000317702 WDR62O43379 1518 aa43.47■■■■■ 4.55
TUBB6-201ENST00000317702 CCER1Q8TC90 406 aaPredicted RBP43.42■■■■■ 4.54
TUBB6-201ENST00000317702 CTTNBP2Q8WZ74 1663 aa43.36■■■■■ 4.53
TUBB6-201ENST00000317702 ERCC6Q03468 1493 aa43.33■■■■■ 4.53
TUBB6-201ENST00000317702 PBRM1Q86U86 1689 aa43.31■■■■■ 4.52
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms