RNA–Protein interactions for RNA: ENST00000484793.5

MACF1-219, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 2 BASIC

Gene MACF1, Length 834 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-219ENST00000484793 NISCHQ9Y2I1 1504 aa64.13■■■■■ 7.86
MACF1-219ENST00000484793 CCDC180Q9P1Z9 1646 aa57.5■■■■■ 6.79
MACF1-219ENST00000484793 ABCC9O60706 1549 aa56.92■■■■■ 6.7
MACF1-219ENST00000484793 RB1CC1Q8TDY2 1594 aa54.51■■■■■ 6.32
MACF1-219ENST00000484793 NACADO15069 1562 aa54.25■■■■■ 6.28
MACF1-219ENST00000484793 MYO15BQ96JP2 1530 aa53.75■■■■■ 6.2
MACF1-219ENST00000484793 DCAF8L2P0C7V8 631 aa53.67■■■■■ 6.18
MACF1-219ENST00000484793 ZCCHC6Q5VYS8 1495 aaKnown RBP53.27■■■■■ 6.12
MACF1-219ENST00000484793 UNC13AQ9UPW8 1703 aa53.15■■■■■ 6.1
MACF1-219ENST00000484793 DCAF1Q9Y4B6 1507 aa53.15■■■■■ 6.1
MACF1-219ENST00000484793 DNAJC5BQ9UF47 199 aa53■■■■■ 6.07
MACF1-219ENST00000484793 PABPN1Q86U42 306 aaKnown RBP eCLIP52.95■■■■■ 6.07
MACF1-219ENST00000484793 BICRAQ9NZM4 1560 aa52.85■■■■■ 6.05
MACF1-219ENST00000484793 SHROOM4Q9ULL8 1493 aa52.43■■■■■ 5.98
MACF1-219ENST00000484793 SCRIBQ14160 1630 aa52.22■■■■■ 5.95
MACF1-219ENST00000484793 EIF4G1Q04637 1599 aaKnown RBP51.53■■■■■ 5.84
MACF1-219ENST00000484793 CC2D2AQ9P2K1 1620 aa51.51■■■■■ 5.84
MACF1-219ENST00000484793 CECR2Q9BXF3 1484 aa51.32■■■■■ 5.81
MACF1-219ENST00000484793 NCAPD3P42695 1498 aa50.07■■■■■ 5.61
MACF1-219ENST00000484793 SMARCA4P51532 1647 aa49.95■■■■■ 5.59
MACF1-219ENST00000484793 ATAD2BQ9ULI0 1458 aa49.91■■■■■ 5.58
MACF1-219ENST00000484793 SMARCA2P51531 1590 aa49.85■■■■■ 5.57
MACF1-219ENST00000484793 BAZ1AQ9NRL2 1556 aaPredicted RBP49.8■■■■■ 5.56
MACF1-219ENST00000484793 HMGXB3Q12766 1538 aa49.77■■■■■ 5.56
MACF1-219ENST00000484793 PEG3Q9GZU2 1588 aa49.58■■■■■ 5.53
MACF1-219ENST00000484793 BAZ1BQ9UIG0 1483 aaKnown RBP49.44■■■■■ 5.5
MACF1-219ENST00000484793 MROH2BQ7Z745 1585 aa49.35■■■■■ 5.49
MACF1-219ENST00000484793 ERCC6Q03468 1493 aa49.18■■■■■ 5.46
MACF1-219ENST00000484793 CUX2O14529 1486 aa49.11■■■■■ 5.45
MACF1-219ENST00000484793 NESP48681 1621 aa48.98■■■■■ 5.43
MACF1-219ENST00000484793 LAMC3Q9Y6N6 1575 aa48.89■■■■■ 5.42
MACF1-219ENST00000484793 WIZO95785 1651 aa48.73■■■■■ 5.39
MACF1-219ENST00000484793 PDS5BQ9NTI5 1447 aa48.57■■■■■ 5.37
MACF1-219ENST00000484793 THOC2Q8NI27 1593 aaKnown RBP48.56■■■■■ 5.36
MACF1-219ENST00000484793 DNAJC5Q9H3Z4 198 aa48.54■■■■■ 5.36
MACF1-219ENST00000484793 CADPSQ9ULU8 1353 aa48.51■■■■■ 5.36
MACF1-219ENST00000484793 RSF1Q96T23 1441 aaPredicted RBP48.49■■■■■ 5.35
MACF1-219ENST00000484793 KIF21AQ7Z4S6 1674 aa48.41■■■■■ 5.34
MACF1-219ENST00000484793 TOP2AP11388 1531 aaKnown RBP48.27■■■■■ 5.32
MACF1-219ENST00000484793 MRC2Q9UBG0 1479 aa48.11■■■■■ 5.29
MACF1-219ENST00000484793 CFTRP13569 1480 aa48.07■■■■■ 5.29
MACF1-219ENST00000484793 WDR62O43379 1518 aa48.02■■■■■ 5.28
MACF1-219ENST00000484793 CEP164Q9UPV0 1460 aa47.98■■■■■ 5.27
MACF1-219ENST00000484793 FANCD2Q9BXW9 1451 aa47.93■■■■■ 5.26
MACF1-219ENST00000484793 CCDC88BA6NC98 1476 aa47.64■■■■■ 5.22
MACF1-219ENST00000484793 PRDM2Q13029 1718 aa47.61■■■■■ 5.21
MACF1-219ENST00000484793 URB2Q14146 1524 aaKnown RBP47.5■■■■■ 5.19
MACF1-219ENST00000484793 ABCC8Q09428 1581 aa47.1■■■■■ 5.13
MACF1-219ENST00000484793 TOPBP1Q92547 1522 aa47.07■■■■■ 5.13
MACF1-219ENST00000484793 IFT140Q96RY7 1462 aa47.04■■■■■ 5.12
MACF1-219ENST00000484793 DNMBPQ6XZF7 1577 aa46.98■■■■■ 5.11
MACF1-219ENST00000484793 ZNF608Q9ULD9 1512 aaPredicted RBP46.81■■■■■ 5.08
MACF1-219ENST00000484793 OSCARQ8IYS5 282 aa46.78■■■■■ 5.08
MACF1-219ENST00000484793 TARBP1Q13395 1621 aaKnown RBP46.65■■■■■ 5.06
MACF1-219ENST00000484793 EIF4G3O43432 1585 aaKnown RBP46.64■■■■■ 5.06
MACF1-219ENST00000484793 POLA1P09884 1462 aaPredicted RBP46.62■■■■■ 5.05
MACF1-219ENST00000484793 AQRO60306 1485 aaKnown RBP eCLIP46.41■■■■■ 5.02
MACF1-219ENST00000484793 SUPT5HO00267 1087 aaKnown RBP46.38■■■■■ 5.02
MACF1-219ENST00000484793 TRIM41Q8WV44 630 aa46.38■■■■■ 5.02
MACF1-219ENST00000484793 CUX1P39880 1505 aa46.37■■■■■ 5.01
MACF1-219ENST00000484793 SOGA1O94964 1423 aa46.37■■■■■ 5.01
MACF1-219ENST00000484793 WDR97A6NE52 1622 aa46.36■■■■■ 5.01
MACF1-219ENST00000484793 FGD5Q6ZNL6 1462 aa46.35■■■■■ 5.01
MACF1-219ENST00000484793 RAD54L2Q9Y4B4 1467 aa46.34■■■■■ 5.01
MACF1-219ENST00000484793 TDRD9Q8NDG6 1382 aaKnown RBP46.17■■■■■ 4.98
MACF1-219ENST00000484793 CHD1O14646 1710 aa46.17■■■■■ 4.98
MACF1-219ENST00000484793 RIMBP3CA6NJZ7 1639 aa46.14■■■■■ 4.98
MACF1-219ENST00000484793 RIMBP3BA6NNM3 1639 aa46.14■■■■■ 4.98
MACF1-219ENST00000484793 RIMBP3Q9UFD9 1639 aa46.14■■■■■ 4.98
MACF1-219ENST00000484793 ARHGEF11O15085 1522 aa46.08■■■■■ 4.97
MACF1-219ENST00000484793 SNAPC4Q5SXM2 1469 aa46.01■■■■■ 4.96
MACF1-219ENST00000484793 MAGI1Q96QZ7 1491 aaPredicted RBP46■■■■■ 4.95
MACF1-219ENST00000484793 GRIN2BQ13224 1484 aa46■■■■■ 4.95
MACF1-219ENST00000484793 FBLN2P98095 1184 aa45.94■■■■■ 4.94
MACF1-219ENST00000484793 ABCA10Q8WWZ4 1543 aa45.93■■■■■ 4.94
MACF1-219ENST00000484793 GAPVD1Q14C86 1478 aa45.85■■■■■ 4.93
MACF1-219ENST00000484793 ABCA5Q8WWZ7 1642 aa45.81■■■■■ 4.92
MACF1-219ENST00000484793 SYNJ2O15056 1496 aa45.81■■■■■ 4.92
MACF1-219ENST00000484793 PBRM1Q86U86 1689 aa45.79■■■■■ 4.92
MACF1-219ENST00000484793 BIVM-ERCC5R4GMW8 1640 aa45.78■■■■■ 4.92
MACF1-219ENST00000484793 WRNQ14191 1432 aaPredicted RBP eCLIP45.77■■■■■ 4.92
MACF1-219ENST00000484793 TOP2BQ02880 1626 aa45.77■■■■■ 4.92
MACF1-219ENST00000484793 CHMP7Q8WUX9 453 aaPredicted RBP45.76■■■■■ 4.92
MACF1-219ENST00000484793 SYNJ1O43426 1573 aa45.75■■■■■ 4.92
MACF1-219ENST00000484793 CLASP1Q7Z460 1538 aa45.75■■■■■ 4.91
MACF1-219ENST00000484793 ARAP1Q96P48 1450 aa45.63■■■■■ 4.9
MACF1-219ENST00000484793 CYB5RLQ6IPT4 315 aa45.57■■■■■ 4.89
MACF1-219ENST00000484793 ADAMTS12P58397 1594 aa45.44■■■■■ 4.86
MACF1-219ENST00000484793 GRIN2AQ12879 1464 aa45.39■■■■■ 4.86
MACF1-219ENST00000484793 ERICH3Q5RHP9 1530 aa45.37■■■■■ 4.85
MACF1-219ENST00000484793 FHAD1B1AJZ9 1412 aa45.32■■■■■ 4.85
MACF1-219ENST00000484793 NUP160Q12769 1436 aa45.27■■■■■ 4.84
MACF1-219ENST00000484793 CEP170Q5SW79 1584 aa45.17■■■■■ 4.82
MACF1-219ENST00000484793 SHROOM2Q13796 1616 aa45.03■■■■■ 4.8
MACF1-219ENST00000484793 ERCC6L2Q5T890 1561 aa44.92■■■■■ 4.78
MACF1-219ENST00000484793 TRHP20396 242 aaPredicted RBP44.91■■■■■ 4.78
MACF1-219ENST00000484793 KIF27Q86VH2 1401 aa44.88■■■■■ 4.78
MACF1-219ENST00000484793 RUSC2Q8N2Y8 1516 aa44.79■■■■■ 4.76
MACF1-219ENST00000484793 IGF1RP08069 1367 aa44.78■■■■■ 4.76
MACF1-219ENST00000484793 CUL7Q14999 1698 aa44.77■■■■■ 4.76
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms