Protein–RNA interactions for Protein: Q9UHC7

MKRN1, E3 ubiquitin-protein ligase makorin-1, humanhuman

Known RBP Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKRN1Q9UHC7 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC41.53■■■■■ 4.24
MKRN1Q9UHC7 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC41.18■■■■■ 4.18
MKRN1Q9UHC7 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC41.16■■■■■ 4.18
MKRN1Q9UHC7 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC40.14■■■■■ 4.02
MKRN1Q9UHC7 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC40.13■■■■■ 4.01
MKRN1Q9UHC7 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC40.07■■■■■ 4.01
MKRN1Q9UHC7 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC39.96■■■■□ 3.99
MKRN1Q9UHC7 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC39.83■■■■□ 3.97
MKRN1Q9UHC7 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC39.8■■■■□ 3.96
MKRN1Q9UHC7 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC39.75■■■■□ 3.95
MKRN1Q9UHC7 AL356512.1-201ENST00000607453 1739 ntBASIC39.74■■■■□ 3.95
MKRN1Q9UHC7 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC39.71■■■■□ 3.95
MKRN1Q9UHC7 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC39.66■■■■□ 3.94
MKRN1Q9UHC7 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC39.15■■■■□ 3.86
MKRN1Q9UHC7 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC39.11■■■■□ 3.85
MKRN1Q9UHC7 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC39.1■■■■□ 3.85
MKRN1Q9UHC7 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC38.92■■■■□ 3.82
MKRN1Q9UHC7 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC38.84■■■■□ 3.81
MKRN1Q9UHC7 HES6-203ENST00000409160 1600 ntTSL 2 BASIC38.81■■■■□ 3.8
MKRN1Q9UHC7 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC38.69■■■■□ 3.78
MKRN1Q9UHC7 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC38.59■■■■□ 3.77
MKRN1Q9UHC7 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC38.53■■■■□ 3.76
MKRN1Q9UHC7 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC38.5■■■■□ 3.75
MKRN1Q9UHC7 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC38.49■■■■□ 3.75
MKRN1Q9UHC7 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC38.49■■■■□ 3.75
MKRN1Q9UHC7 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC38.38■■■■□ 3.73
MKRN1Q9UHC7 ZNRF2P1-201ENST00000441407 443 ntBASIC38.33■■■■□ 3.73
MKRN1Q9UHC7 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC38.3■■■■□ 3.72
MKRN1Q9UHC7 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC38.3■■■■□ 3.72
MKRN1Q9UHC7 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC38.23■■■■□ 3.71
MKRN1Q9UHC7 INO80B-203ENST00000409917 796 ntTSL 2 BASIC38.19■■■■□ 3.7
MKRN1Q9UHC7 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC38.17■■■■□ 3.7
MKRN1Q9UHC7 AC006077.2-201ENST00000623591 457 ntBASIC38.17■■■■□ 3.7
MKRN1Q9UHC7 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC38.07■■■■□ 3.69
MKRN1Q9UHC7 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC38.01■■■■□ 3.68
MKRN1Q9UHC7 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC37.77■■■■□ 3.64
MKRN1Q9UHC7 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC37.75■■■■□ 3.63
MKRN1Q9UHC7 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC37.73■■■■□ 3.63
MKRN1Q9UHC7 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC37.65■■■■□ 3.62
MKRN1Q9UHC7 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC37.48■■■■□ 3.59
MKRN1Q9UHC7 AC015813.7-201ENST00000623294 581 ntBASIC37.39■■■■□ 3.58
MKRN1Q9UHC7 AP002365.1-201ENST00000603448 772 ntBASIC37.36■■■■□ 3.57
MKRN1Q9UHC7 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC37.18■■■■□ 3.54
MKRN1Q9UHC7 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC37.18■■■■□ 3.54
MKRN1Q9UHC7 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC37.11■■■■□ 3.53
MKRN1Q9UHC7 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC37.1■■■■□ 3.53
MKRN1Q9UHC7 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC37■■■■□ 3.51
MKRN1Q9UHC7 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC37■■■■□ 3.51
MKRN1Q9UHC7 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC36.97■■■■□ 3.51
MKRN1Q9UHC7 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC36.96■■■■□ 3.51
MKRN1Q9UHC7 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC36.89■■■■□ 3.5
MKRN1Q9UHC7 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC36.87■■■■□ 3.49
MKRN1Q9UHC7 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC36.86■■■■□ 3.49
MKRN1Q9UHC7 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC36.85■■■■□ 3.49
MKRN1Q9UHC7 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC36.81■■■■□ 3.48
MKRN1Q9UHC7 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC36.8■■■■□ 3.48
MKRN1Q9UHC7 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC36.79■■■■□ 3.48
MKRN1Q9UHC7 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC36.75■■■■□ 3.47
MKRN1Q9UHC7 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC36.71■■■■□ 3.47
MKRN1Q9UHC7 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC36.71■■■■□ 3.47
MKRN1Q9UHC7 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC36.6■■■■□ 3.45
MKRN1Q9UHC7 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC36.58■■■■□ 3.45
MKRN1Q9UHC7 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC36.56■■■■□ 3.44
MKRN1Q9UHC7 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC36.55■■■■□ 3.44
MKRN1Q9UHC7 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC36.51■■■■□ 3.44
MKRN1Q9UHC7 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC36.41■■■■□ 3.42
MKRN1Q9UHC7 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC36.38■■■■□ 3.41
MKRN1Q9UHC7 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC36.37■■■■□ 3.41
MKRN1Q9UHC7 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC36.36■■■■□ 3.41
MKRN1Q9UHC7 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC36.35■■■■□ 3.41
MKRN1Q9UHC7 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC36.33■■■■□ 3.41
MKRN1Q9UHC7 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC36.32■■■■□ 3.4
MKRN1Q9UHC7 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC36.3■■■■□ 3.4
MKRN1Q9UHC7 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC36.3■■■■□ 3.4
MKRN1Q9UHC7 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC36.25■■■■□ 3.39
MKRN1Q9UHC7 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC36.23■■■■□ 3.39
MKRN1Q9UHC7 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC36.22■■■■□ 3.39
MKRN1Q9UHC7 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC36.2■■■■□ 3.39
MKRN1Q9UHC7 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC36.14■■■■□ 3.38
MKRN1Q9UHC7 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC36.12■■■■□ 3.37
MKRN1Q9UHC7 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC36.11■■■■□ 3.37
MKRN1Q9UHC7 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC36.11■■■■□ 3.37
MKRN1Q9UHC7 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC36.11■■■■□ 3.37
MKRN1Q9UHC7 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC36.1■■■■□ 3.37
MKRN1Q9UHC7 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC36.1■■■■□ 3.37
MKRN1Q9UHC7 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC36.08■■■■□ 3.37
MKRN1Q9UHC7 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC36.08■■■■□ 3.37
MKRN1Q9UHC7 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC36.07■■■■□ 3.36
MKRN1Q9UHC7 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC36.03■■■■□ 3.36
MKRN1Q9UHC7 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC36.02■■■■□ 3.36
MKRN1Q9UHC7 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC36.01■■■■□ 3.36
MKRN1Q9UHC7 DYNLL1-208ENST00000550178 581 ntBASIC36.01■■■■□ 3.36
MKRN1Q9UHC7 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC36■■■■□ 3.35
MKRN1Q9UHC7 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC35.99■■■■□ 3.35
MKRN1Q9UHC7 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC35.95■■■■□ 3.35
MKRN1Q9UHC7 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC35.9■■■■□ 3.34
MKRN1Q9UHC7 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC35.88■■■■□ 3.33
MKRN1Q9UHC7 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC35.87■■■■□ 3.33
MKRN1Q9UHC7 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC35.84■■■■□ 3.33
MKRN1Q9UHC7 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC35.83■■■■□ 3.33
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms