Protein–RNA interactions for Protein: Q96LS8

C2orf48, Uncharacterized protein C2orf48, humanhuman

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C2orf48Q96LS8 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
C2orf48Q96LS8 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
C2orf48Q96LS8 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC17.97■□□□□ 0.47
C2orf48Q96LS8 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
C2orf48Q96LS8 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC17.96■□□□□ 0.47
C2orf48Q96LS8 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
C2orf48Q96LS8 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
C2orf48Q96LS8 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC17.95■□□□□ 0.46
C2orf48Q96LS8 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
C2orf48Q96LS8 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
C2orf48Q96LS8 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
C2orf48Q96LS8 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
C2orf48Q96LS8 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC17.93■□□□□ 0.46
C2orf48Q96LS8 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
C2orf48Q96LS8 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
C2orf48Q96LS8 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
C2orf48Q96LS8 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
C2orf48Q96LS8 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
C2orf48Q96LS8 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
C2orf48Q96LS8 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
C2orf48Q96LS8 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
C2orf48Q96LS8 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
C2orf48Q96LS8 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
C2orf48Q96LS8 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
C2orf48Q96LS8 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
C2orf48Q96LS8 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC17.87■□□□□ 0.45
C2orf48Q96LS8 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
C2orf48Q96LS8 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
C2orf48Q96LS8 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
C2orf48Q96LS8 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
C2orf48Q96LS8 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
C2orf48Q96LS8 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC17.84■□□□□ 0.45
C2orf48Q96LS8 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
C2orf48Q96LS8 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
C2orf48Q96LS8 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
C2orf48Q96LS8 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC17.83■□□□□ 0.44
C2orf48Q96LS8 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
C2orf48Q96LS8 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
C2orf48Q96LS8 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
C2orf48Q96LS8 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC17.82■□□□□ 0.44
C2orf48Q96LS8 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
C2orf48Q96LS8 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
C2orf48Q96LS8 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
C2orf48Q96LS8 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
C2orf48Q96LS8 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC17.81■□□□□ 0.44
C2orf48Q96LS8 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC17.81■□□□□ 0.44
C2orf48Q96LS8 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC17.81■□□□□ 0.44
C2orf48Q96LS8 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
C2orf48Q96LS8 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
C2orf48Q96LS8 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC17.8■□□□□ 0.44
C2orf48Q96LS8 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
C2orf48Q96LS8 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
C2orf48Q96LS8 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
C2orf48Q96LS8 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC17.78■□□□□ 0.44
C2orf48Q96LS8 AC135731.1-201ENST00000569415 2548 ntBASIC17.78■□□□□ 0.44
C2orf48Q96LS8 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC17.77■□□□□ 0.44
C2orf48Q96LS8 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC17.77■□□□□ 0.44
C2orf48Q96LS8 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC17.77■□□□□ 0.44
C2orf48Q96LS8 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
C2orf48Q96LS8 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
C2orf48Q96LS8 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
C2orf48Q96LS8 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
C2orf48Q96LS8 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
C2orf48Q96LS8 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
C2orf48Q96LS8 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC17.74■□□□□ 0.43
C2orf48Q96LS8 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC17.73■□□□□ 0.43
C2orf48Q96LS8 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
C2orf48Q96LS8 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
C2orf48Q96LS8 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC17.72■□□□□ 0.43
C2orf48Q96LS8 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
C2orf48Q96LS8 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC17.72■□□□□ 0.43
C2orf48Q96LS8 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
C2orf48Q96LS8 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC17.72■□□□□ 0.43
C2orf48Q96LS8 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
C2orf48Q96LS8 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
C2orf48Q96LS8 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
C2orf48Q96LS8 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
C2orf48Q96LS8 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
C2orf48Q96LS8 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
C2orf48Q96LS8 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
C2orf48Q96LS8 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
C2orf48Q96LS8 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC17.68■□□□□ 0.42
C2orf48Q96LS8 KLF16-203ENST00000592313 508 ntTSL 3 BASIC17.68■□□□□ 0.42
C2orf48Q96LS8 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
C2orf48Q96LS8 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
C2orf48Q96LS8 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
C2orf48Q96LS8 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
C2orf48Q96LS8 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC17.67■□□□□ 0.42
C2orf48Q96LS8 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
C2orf48Q96LS8 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
C2orf48Q96LS8 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
C2orf48Q96LS8 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC17.66■□□□□ 0.42
C2orf48Q96LS8 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
C2orf48Q96LS8 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
C2orf48Q96LS8 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
C2orf48Q96LS8 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
C2orf48Q96LS8 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
C2orf48Q96LS8 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC17.64■□□□□ 0.41
C2orf48Q96LS8 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
C2orf48Q96LS8 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 63.7 ms