Protein–RNA interactions for Protein: Q8N6V4

C10orf53, UPF0728 protein C10orf53, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C10orf53Q8N6V4 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC24.7■■□□□ 1.54
C10orf53Q8N6V4 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
C10orf53Q8N6V4 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC24.67■■□□□ 1.54
C10orf53Q8N6V4 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC24.67■■□□□ 1.54
C10orf53Q8N6V4 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
C10orf53Q8N6V4 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC24.66■■□□□ 1.54
C10orf53Q8N6V4 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC24.66■■□□□ 1.54
C10orf53Q8N6V4 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
C10orf53Q8N6V4 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
C10orf53Q8N6V4 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
C10orf53Q8N6V4 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
C10orf53Q8N6V4 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC24.65■■□□□ 1.54
C10orf53Q8N6V4 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
C10orf53Q8N6V4 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC24.64■■□□□ 1.54
C10orf53Q8N6V4 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC24.64■■□□□ 1.54
C10orf53Q8N6V4 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC24.63■■□□□ 1.53
C10orf53Q8N6V4 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC24.63■■□□□ 1.53
C10orf53Q8N6V4 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
C10orf53Q8N6V4 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
C10orf53Q8N6V4 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC24.61■■□□□ 1.53
C10orf53Q8N6V4 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC24.61■■□□□ 1.53
C10orf53Q8N6V4 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC24.61■■□□□ 1.53
C10orf53Q8N6V4 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC24.61■■□□□ 1.53
C10orf53Q8N6V4 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC24.6■■□□□ 1.53
C10orf53Q8N6V4 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC24.6■■□□□ 1.53
C10orf53Q8N6V4 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
C10orf53Q8N6V4 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
C10orf53Q8N6V4 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
C10orf53Q8N6V4 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC24.58■■□□□ 1.53
C10orf53Q8N6V4 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
C10orf53Q8N6V4 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC24.57■■□□□ 1.52
C10orf53Q8N6V4 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC24.55■■□□□ 1.52
C10orf53Q8N6V4 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
C10orf53Q8N6V4 KLF16-203ENST00000592313 508 ntTSL 3 BASIC24.53■■□□□ 1.52
C10orf53Q8N6V4 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC24.52■■□□□ 1.52
C10orf53Q8N6V4 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
C10orf53Q8N6V4 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
C10orf53Q8N6V4 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
C10orf53Q8N6V4 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
C10orf53Q8N6V4 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC24.45■■□□□ 1.51
C10orf53Q8N6V4 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
C10orf53Q8N6V4 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC24.44■■□□□ 1.5
C10orf53Q8N6V4 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC24.43■■□□□ 1.5
C10orf53Q8N6V4 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC24.43■■□□□ 1.5
C10orf53Q8N6V4 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC24.42■■□□□ 1.5
C10orf53Q8N6V4 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
C10orf53Q8N6V4 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC24.41■■□□□ 1.5
C10orf53Q8N6V4 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC24.41■■□□□ 1.5
C10orf53Q8N6V4 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC24.41■■□□□ 1.5
C10orf53Q8N6V4 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
C10orf53Q8N6V4 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
C10orf53Q8N6V4 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
C10orf53Q8N6V4 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC24.38■■□□□ 1.49
C10orf53Q8N6V4 AL161658.1-201ENST00000623641 1967 ntBASIC24.38■■□□□ 1.49
C10orf53Q8N6V4 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC24.37■■□□□ 1.49
C10orf53Q8N6V4 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
C10orf53Q8N6V4 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC24.37■■□□□ 1.49
C10orf53Q8N6V4 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC24.37■■□□□ 1.49
C10orf53Q8N6V4 RARRES2P7-201ENST00000567349 469 ntBASIC24.36■■□□□ 1.49
C10orf53Q8N6V4 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC24.35■■□□□ 1.49
C10orf53Q8N6V4 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC24.35■■□□□ 1.49
C10orf53Q8N6V4 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
C10orf53Q8N6V4 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
C10orf53Q8N6V4 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
C10orf53Q8N6V4 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC24.34■■□□□ 1.49
C10orf53Q8N6V4 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
C10orf53Q8N6V4 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
C10orf53Q8N6V4 ABCB10P1-201ENST00000614297 2181 ntBASIC24.32■■□□□ 1.48
C10orf53Q8N6V4 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC24.31■■□□□ 1.48
C10orf53Q8N6V4 AL133380.1-201ENST00000506013 324 ntBASIC24.31■■□□□ 1.48
C10orf53Q8N6V4 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC24.31■■□□□ 1.48
C10orf53Q8N6V4 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
C10orf53Q8N6V4 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
C10orf53Q8N6V4 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC24.28■■□□□ 1.48
C10orf53Q8N6V4 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
C10orf53Q8N6V4 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC24.28■■□□□ 1.48
C10orf53Q8N6V4 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
C10orf53Q8N6V4 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
C10orf53Q8N6V4 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC24.27■■□□□ 1.48
C10orf53Q8N6V4 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC24.26■■□□□ 1.47
C10orf53Q8N6V4 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC24.26■■□□□ 1.47
C10orf53Q8N6V4 WASH5P-204ENST00000632292 975 ntBASIC24.26■■□□□ 1.47
C10orf53Q8N6V4 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC24.26■■□□□ 1.47
C10orf53Q8N6V4 SETD8P1-201ENST00000623146 1180 ntBASIC24.24■■□□□ 1.47
C10orf53Q8N6V4 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
C10orf53Q8N6V4 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
C10orf53Q8N6V4 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
C10orf53Q8N6V4 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
C10orf53Q8N6V4 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
C10orf53Q8N6V4 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
C10orf53Q8N6V4 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC24.23■■□□□ 1.47
C10orf53Q8N6V4 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC24.22■■□□□ 1.47
C10orf53Q8N6V4 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC24.22■■□□□ 1.47
C10orf53Q8N6V4 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC24.21■■□□□ 1.47
C10orf53Q8N6V4 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC24.21■■□□□ 1.47
C10orf53Q8N6V4 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC24.21■■□□□ 1.47
C10orf53Q8N6V4 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
C10orf53Q8N6V4 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
C10orf53Q8N6V4 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC24.2■■□□□ 1.46
C10orf53Q8N6V4 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms