Protein–RNA interactions for Protein: Q56UQ5

TPT1-like protein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q56UQ5 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Q56UQ5 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC21.34■■□□□ 1.01
Q56UQ5 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC21.33■■□□□ 1.01
Q56UQ5 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC21.32■■□□□ 1
Q56UQ5 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC21.3■■□□□ 1
Q56UQ5 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC21.3■■□□□ 1
Q56UQ5 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC21.3■■□□□ 1
Q56UQ5 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Q56UQ5 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Q56UQ5 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
Q56UQ5 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
Q56UQ5 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC21.27■■□□□ 1
Q56UQ5 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC21.27■■□□□ 1
Q56UQ5 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
Q56UQ5 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Q56UQ5 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
Q56UQ5 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Q56UQ5 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Q56UQ5 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Q56UQ5 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Q56UQ5 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Q56UQ5 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Q56UQ5 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC21.22■□□□□ 0.99
Q56UQ5 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Q56UQ5 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC21.21■□□□□ 0.99
Q56UQ5 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Q56UQ5 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Q56UQ5 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Q56UQ5 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC21.21■□□□□ 0.99
Q56UQ5 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Q56UQ5 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Q56UQ5 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC21.19■□□□□ 0.98
Q56UQ5 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC21.19■□□□□ 0.98
Q56UQ5 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC21.18■□□□□ 0.98
Q56UQ5 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Q56UQ5 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC21.17■□□□□ 0.98
Q56UQ5 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC21.17■□□□□ 0.98
Q56UQ5 AL161658.1-201ENST00000623641 1967 ntBASIC21.16■□□□□ 0.98
Q56UQ5 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Q56UQ5 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Q56UQ5 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Q56UQ5 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Q56UQ5 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Q56UQ5 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Q56UQ5 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC21.11■□□□□ 0.97
Q56UQ5 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Q56UQ5 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Q56UQ5 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC21.1■□□□□ 0.97
Q56UQ5 KLF16-203ENST00000592313 508 ntTSL 3 BASIC21.1■□□□□ 0.97
Q56UQ5 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Q56UQ5 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Q56UQ5 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Q56UQ5 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Q56UQ5 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Q56UQ5 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Q56UQ5 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Q56UQ5 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Q56UQ5 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Q56UQ5 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC21.02■□□□□ 0.96
Q56UQ5 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Q56UQ5 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC21.02■□□□□ 0.96
Q56UQ5 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.95
Q56UQ5 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Q56UQ5 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Q56UQ5 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Q56UQ5 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC21.01■□□□□ 0.95
Q56UQ5 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Q56UQ5 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Q56UQ5 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC21.01■□□□□ 0.95
Q56UQ5 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC21■□□□□ 0.95
Q56UQ5 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC21■□□□□ 0.95
Q56UQ5 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Q56UQ5 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Q56UQ5 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC20.99■□□□□ 0.95
Q56UQ5 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Q56UQ5 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC20.98■□□□□ 0.95
Q56UQ5 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC20.96■□□□□ 0.95
Q56UQ5 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC20.95■□□□□ 0.95
Q56UQ5 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Q56UQ5 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Q56UQ5 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC20.95■□□□□ 0.94
Q56UQ5 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Q56UQ5 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Q56UQ5 RARRES2P7-201ENST00000567349 469 ntBASIC20.94■□□□□ 0.94
Q56UQ5 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Q56UQ5 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Q56UQ5 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Q56UQ5 AL133380.1-201ENST00000506013 324 ntBASIC20.92■□□□□ 0.94
Q56UQ5 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Q56UQ5 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC20.91■□□□□ 0.94
Q56UQ5 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Q56UQ5 AC139426.1-201ENST00000568218 2529 ntBASIC20.91■□□□□ 0.94
Q56UQ5 ABCB10P1-201ENST00000614297 2181 ntBASIC20.9■□□□□ 0.94
Q56UQ5 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Q56UQ5 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
Q56UQ5 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Q56UQ5 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Q56UQ5 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Q56UQ5 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Q56UQ5 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC20.88■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms