Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
TCRBV4S1A1TA0A5B7 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC21.72■■□□□ 1.07
TCRBV4S1A1TA0A5B7 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.07
TCRBV4S1A1TA0A5B7 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
TCRBV4S1A1TA0A5B7 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TCRBV4S1A1TA0A5B7 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
TCRBV4S1A1TA0A5B7 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TCRBV4S1A1TA0A5B7 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
TCRBV4S1A1TA0A5B7 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TCRBV4S1A1TA0A5B7 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TCRBV4S1A1TA0A5B7 SUZ12P1-203ENST00000578195 985 ntBASIC21.69■■□□□ 1.06
TCRBV4S1A1TA0A5B7 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC21.69■■□□□ 1.06
TCRBV4S1A1TA0A5B7 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TCRBV4S1A1TA0A5B7 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC21.68■■□□□ 1.06
TCRBV4S1A1TA0A5B7 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC21.68■■□□□ 1.06
TCRBV4S1A1TA0A5B7 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC21.68■■□□□ 1.06
TCRBV4S1A1TA0A5B7 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TCRBV4S1A1TA0A5B7 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TCRBV4S1A1TA0A5B7 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
TCRBV4S1A1TA0A5B7 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC21.65■■□□□ 1.06
TCRBV4S1A1TA0A5B7 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC21.64■■□□□ 1.06
TCRBV4S1A1TA0A5B7 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC21.64■■□□□ 1.06
TCRBV4S1A1TA0A5B7 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC21.64■■□□□ 1.05
TCRBV4S1A1TA0A5B7 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
TCRBV4S1A1TA0A5B7 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TCRBV4S1A1TA0A5B7 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TCRBV4S1A1TA0A5B7 AL133380.1-201ENST00000506013 324 ntBASIC21.63■■□□□ 1.05
TCRBV4S1A1TA0A5B7 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TCRBV4S1A1TA0A5B7 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC21.63■■□□□ 1.05
TCRBV4S1A1TA0A5B7 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TCRBV4S1A1TA0A5B7 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TCRBV4S1A1TA0A5B7 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
TCRBV4S1A1TA0A5B7 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
TCRBV4S1A1TA0A5B7 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
TCRBV4S1A1TA0A5B7 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TCRBV4S1A1TA0A5B7 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC21.6■■□□□ 1.05
TCRBV4S1A1TA0A5B7 AC120057.4-201ENST00000624722 1615 ntBASIC21.59■■□□□ 1.05
TCRBV4S1A1TA0A5B7 CAHM-201ENST00000604200 896 ntBASIC21.59■■□□□ 1.05
TCRBV4S1A1TA0A5B7 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
TCRBV4S1A1TA0A5B7 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC21.56■■□□□ 1.04
TCRBV4S1A1TA0A5B7 AL391121.1-201ENST00000607967 1349 ntBASIC21.55■■□□□ 1.04
TCRBV4S1A1TA0A5B7 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TCRBV4S1A1TA0A5B7 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
TCRBV4S1A1TA0A5B7 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC21.55■■□□□ 1.04
TCRBV4S1A1TA0A5B7 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TCRBV4S1A1TA0A5B7 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC21.53■■□□□ 1.04
TCRBV4S1A1TA0A5B7 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TCRBV4S1A1TA0A5B7 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
TCRBV4S1A1TA0A5B7 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TCRBV4S1A1TA0A5B7 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
TCRBV4S1A1TA0A5B7 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC21.52■■□□□ 1.04
TCRBV4S1A1TA0A5B7 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
TCRBV4S1A1TA0A5B7 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TCRBV4S1A1TA0A5B7 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TCRBV4S1A1TA0A5B7 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC21.5■■□□□ 1.03
TCRBV4S1A1TA0A5B7 RPS2P35-201ENST00000443417 897 ntBASIC21.5■■□□□ 1.03
TCRBV4S1A1TA0A5B7 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC21.5■■□□□ 1.03
TCRBV4S1A1TA0A5B7 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC21.49■■□□□ 1.03
TCRBV4S1A1TA0A5B7 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
TCRBV4S1A1TA0A5B7 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
TCRBV4S1A1TA0A5B7 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
TCRBV4S1A1TA0A5B7 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TCRBV4S1A1TA0A5B7 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TCRBV4S1A1TA0A5B7 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
TCRBV4S1A1TA0A5B7 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
TCRBV4S1A1TA0A5B7 EBPL-202ENST00000378268 680 ntTSL 3 BASIC21.47■■□□□ 1.03
TCRBV4S1A1TA0A5B7 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TCRBV4S1A1TA0A5B7 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
TCRBV4S1A1TA0A5B7 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TCRBV4S1A1TA0A5B7 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
TCRBV4S1A1TA0A5B7 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TCRBV4S1A1TA0A5B7 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TCRBV4S1A1TA0A5B7 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC21.43■■□□□ 1.02
TCRBV4S1A1TA0A5B7 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TCRBV4S1A1TA0A5B7 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TCRBV4S1A1TA0A5B7 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
TCRBV4S1A1TA0A5B7 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
TCRBV4S1A1TA0A5B7 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
TCRBV4S1A1TA0A5B7 AP006261.1-201ENST00000584783 668 ntBASIC21.4■■□□□ 1.02
TCRBV4S1A1TA0A5B7 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
TCRBV4S1A1TA0A5B7 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC21.39■■□□□ 1.01
TCRBV4S1A1TA0A5B7 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC21.38■■□□□ 1.01
TCRBV4S1A1TA0A5B7 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
TCRBV4S1A1TA0A5B7 HNRNPLP2-201ENST00000568980 1570 ntBASIC21.38■■□□□ 1.01
TCRBV4S1A1TA0A5B7 ABCB10P1-201ENST00000614297 2181 ntBASIC21.37■■□□□ 1.01
TCRBV4S1A1TA0A5B7 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC21.37■■□□□ 1.01
TCRBV4S1A1TA0A5B7 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC21.37■■□□□ 1.01
TCRBV4S1A1TA0A5B7 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
TCRBV4S1A1TA0A5B7 AL162393.1-201ENST00000437852 946 ntBASIC21.35■■□□□ 1.01
TCRBV4S1A1TA0A5B7 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC21.35■■□□□ 1.01
TCRBV4S1A1TA0A5B7 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC21.35■■□□□ 1.01
TCRBV4S1A1TA0A5B7 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
TCRBV4S1A1TA0A5B7 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC21.33■■□□□ 1.01
TCRBV4S1A1TA0A5B7 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
TCRBV4S1A1TA0A5B7 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
TCRBV4S1A1TA0A5B7 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TCRBV4S1A1TA0A5B7 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC21.32■■□□□ 1
TCRBV4S1A1TA0A5B7 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TCRBV4S1A1TA0A5B7 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC21.31■■□□□ 1
TCRBV4S1A1TA0A5B7 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC21.31■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms