Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 CSNK1G2P1-201ENST00000442675 955 ntBASIC12.85□□□□□ -0.35
RAE1P78406 GULOP-201ENST00000454030 748 ntBASIC12.85□□□□□ -0.35
RAE1P78406 ANKRD2-204ENST00000455090 1072 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
RAE1P78406 LAMTOR4-209ENST00000488241 613 ntTSL 2 BASIC12.85□□□□□ -0.35
RAE1P78406 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC12.85□□□□□ -0.35
RAE1P78406 AC068867.1-201ENST00000559855 150 ntBASIC12.85□□□□□ -0.35
RAE1P78406 TPM1-223ENST00000560445 485 ntTSL 3 BASIC12.85□□□□□ -0.35
RAE1P78406 NAA38-205ENST00000575771 852 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
RAE1P78406 MIR3907-201ENST00000579424 151 ntBASIC12.85□□□□□ -0.35
RAE1P78406 FAM90A28P-201ENST00000596881 489 ntTSL 5 BASIC12.85□□□□□ -0.35
RAE1P78406 HDGF-203ENST00000368209 2171 ntTSL 2 BASIC12.85□□□□□ -0.35
RAE1P78406 CSTF2-203ENST00000415585 2074 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
RAE1P78406 RRBP1-206ENST00000455029 2485 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
RAE1P78406 PCK2-208ENST00000559250 1804 ntTSL 5 BASIC12.85□□□□□ -0.35
RAE1P78406 FADS1-206ENST00000460649 1559 ntTSL 2 BASIC12.85□□□□□ -0.35
RAE1P78406 ATP6V0D1-218ENST00000602876 1554 ntTSL 5 BASIC12.85□□□□□ -0.35
RAE1P78406 LINC01649-202ENST00000634255 1743 ntTSL 5 BASIC12.85□□□□□ -0.35
RAE1P78406 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
RAE1P78406 TRMT10B-203ENST00000377754 1881 ntTSL 2 BASIC12.85□□□□□ -0.35
RAE1P78406 STRAP-202ENST00000419869 1866 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
RAE1P78406 IQCJ-201ENST00000397832 1460 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
RAE1P78406 SRRM1-201ENST00000323848 4011 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
RAE1P78406 KAZN-205ENST00000400798 3643 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
RAE1P78406 BCAP29-201ENST00000005259 4572 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
RAE1P78406 IKBKB-218ENST00000520835 2403 ntTSL 2 BASIC12.84□□□□□ -0.35
RAE1P78406 PGGHG-204ENST00000409655 2963 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
RAE1P78406 CBR4-202ENST00000504480 1602 ntTSL 2 BASIC12.84□□□□□ -0.35
RAE1P78406 MEST-206ENST00000416162 2158 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
RAE1P78406 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
RAE1P78406 ETAA1-201ENST00000272342 3418 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
RAE1P78406 FAM86JP-201ENST00000467239 1910 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
RAE1P78406 GUCY2EP-203ENST00000531117 1918 ntBASIC12.84□□□□□ -0.35
RAE1P78406 NOP2-212ENST00000541778 3038 ntTSL 2 BASIC12.84□□□□□ -0.35
RAE1P78406 DHX30-215ENST00000619982 3574 ntAPPRIS ALT1 TSL 5 BASIC12.84□□□□□ -0.35
RAE1P78406 ANKRA2-201ENST00000296785 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
RAE1P78406 KANK4-201ENST00000317477 2080 ntTSL 2 BASIC12.84□□□□□ -0.35
RAE1P78406 TMEM9-202ENST00000367332 1544 ntAPPRIS ALT1 TSL 2 BASIC12.84□□□□□ -0.35
RAE1P78406 PPHLN1-223ENST00000610488 1521 ntTSL 5 BASIC12.84□□□□□ -0.35
RAE1P78406 ZNF564-201ENST00000339282 2935 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
RAE1P78406 VILL-201ENST00000283713 2970 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
RAE1P78406 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
RAE1P78406 ATP5C1-201ENST00000335698 1078 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
RAE1P78406 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
RAE1P78406 CD300LG-203ENST00000377203 1060 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
RAE1P78406 AP000356.3-201ENST00000382243 753 ntBASIC12.84□□□□□ -0.35
RAE1P78406 VPREB1-202ENST00000403807 755 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
RAE1P78406 AL354892.2-201ENST00000413088 403 ntTSL 5 BASIC12.84□□□□□ -0.35
RAE1P78406 AC147651.3-201ENST00000429872 731 ntTSL 2 BASIC12.84□□□□□ -0.35
RAE1P78406 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC12.84□□□□□ -0.35
RAE1P78406 KRT18P62-201ENST00000446618 1287 ntBASIC12.84□□□□□ -0.35
RAE1P78406 AL390961.2-201ENST00000454991 472 ntTSL 3 BASIC12.84□□□□□ -0.35
RAE1P78406 AC019193.1-201ENST00000506678 823 ntBASIC12.84□□□□□ -0.35
RAE1P78406 MYOZ3-205ENST00000520112 605 ntTSL 4 BASIC12.84□□□□□ -0.35
RAE1P78406 TNFSF13B-206ENST00000542136 495 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
RAE1P78406 TROAP-213ENST00000550709 778 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
RAE1P78406 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC12.84□□□□□ -0.35
RAE1P78406 AC023825.2-201ENST00000562970 672 ntTSL 2 BASIC12.84□□□□□ -0.35
RAE1P78406 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC12.84□□□□□ -0.35
RAE1P78406 AC020934.2-201ENST00000592400 456 ntTSL 3 BASIC12.84□□□□□ -0.35
RAE1P78406 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC12.84□□□□□ -0.35
RAE1P78406 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
RAE1P78406 NRDC-202ENST00000354831 3895 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
RAE1P78406 PDE1B-203ENST00000538346 1711 ntTSL 2 BASIC12.84□□□□□ -0.35
RAE1P78406 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
RAE1P78406 FBXO5-201ENST00000229758 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
RAE1P78406 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
RAE1P78406 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
RAE1P78406 MDM1-201ENST00000303145 2918 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
RAE1P78406 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
RAE1P78406 UQCC2-204ENST00000607484 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
RAE1P78406 ERCC1-208ENST00000589165 1453 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
RAE1P78406 SMPDL3B-206ENST00000549094 1611 ntTSL 5 BASIC12.84□□□□□ -0.35
RAE1P78406 AC135506.1-201ENST00000603877 1799 ntBASIC12.84□□□□□ -0.35
RAE1P78406 RBMY1E-203ENST00000382659 1921 ntAPPRIS P5 TSL 1 (best) BASIC12.84□□□□□ -0.35
RAE1P78406 RBMY1D-202ENST00000382680 1921 ntAPPRIS P5 TSL 1 (best) BASIC12.84□□□□□ -0.35
RAE1P78406 RBMY1A1-203ENST00000382707 1921 ntAPPRIS P5 TSL 1 (best) BASIC12.84□□□□□ -0.35
RAE1P78406 RBMY1B-202ENST00000383020 1921 ntAPPRIS P5 TSL 1 (best) BASIC12.84□□□□□ -0.35
RAE1P78406 PICART1-201ENST00000499842 2533 ntTSL 2 BASIC12.84□□□□□ -0.35
RAE1P78406 MYCBP-201ENST00000397572 2818 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
RAE1P78406 ADGRA1-201ENST00000392606 3438 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
RAE1P78406 RRBP1-202ENST00000360807 3727 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
RAE1P78406 AOC4P-203ENST00000566825 2289 ntBASIC12.83□□□□□ -0.35
RAE1P78406 HACD3-210ENST00000568793 1824 ntTSL 5 BASIC12.83□□□□□ -0.35
RAE1P78406 RAB3D-201ENST00000222120 4273 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
RAE1P78406 FAM168A-204ENST00000450446 1364 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
RAE1P78406 TRMT61A-202ENST00000389749 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
RAE1P78406 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
RAE1P78406 DNMT3B-202ENST00000328111 4336 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
RAE1P78406 ZBED2-201ENST00000317012 2311 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
RAE1P78406 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
RAE1P78406 ENTPD3-204ENST00000456402 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
RAE1P78406 GPA33-201ENST00000367868 2802 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
RAE1P78406 SRPRB-201ENST00000466490 2827 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
RAE1P78406 ARHGEF9-203ENST00000374872 2364 ntTSL 2 BASIC12.83□□□□□ -0.36
RAE1P78406 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC12.83□□□□□ -0.36
RAE1P78406 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
RAE1P78406 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
RAE1P78406 CYB561D1-203ENST00000393709 620 ntAPPRIS ALT1 TSL 4 BASIC12.83□□□□□ -0.36
RAE1P78406 NAPB-202ENST00000398425 3824 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
RAE1P78406 SNU13-204ENST00000402458 462 ntTSL 3 BASIC12.83□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms